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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-29b

905 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
si:dkey-6a5.1 ENSDART00000026593 glutamate receptor interacting protein 1 [Source:RefSeq_peptide;Acc:NP_001038316]
15.7642 -16.64 0.00000000149618 700 5 11 6 [+] picture button
LOC567119 ENSDART00000090803 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137] BY ORTHOLOGY TO:ENST00000306917
17.728 -23.27 0.0000000125157 700 6 7 6 [+] picture button
sol ENSDART00000059448 solo [Source:RefSeq_peptide;Acc:NP_878301]
16.8187 -19.89 0.0000000152961 933 7 4 6 [+] picture button
XR_029782.1 ENSDART00000081730 similar to DNA polymerase zeta catalytic subunit (LOC569100), mRNA [Source:RefSeq_dna;Acc:XR_029782]
16.2056 -16.76 0.0000000165594 700 5 4 8 [+] picture button
zgc:152701 ENSDART00000036277 hypothetical protein LOC568877 [Source:RefSeq_peptide;Acc:NP_001034447]
15.7616 -16.66 0.0000000179166 700 5 7 5 [+] picture button
MAD2L1BP ENSDART00000004779 MAD2L1-binding protein (Caught by MAD2 protein). [Source:Uniprot/SWISSPROT;Acc:Q15013]
17.5747 -19.63 0.0000000383458 700 9 1 9 [+] picture button
has3 ENSDART00000079817 hyaluronan synthase 3 [Source:RefSeq_peptide;Acc:NP_775327]
17.0087 -21.45 0.0000000719999 700 11 1 15 [+] picture button
sppl2 ENSDART00000029801 signal peptide peptidase-like 2 isoform 1 [Source:RefSeq_peptide;Acc:NP_001015067]
15.7675 -13.5 0.000000146056 1120 5 3 5 [+] picture button
bach2 ENSDART00000028717 Novel protein similar to human and mouse BTB and CNC homology 1, basic leucine zipper transcription factor 2 (BACH2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RIW6]
17.9492 -21.89 0.000000153955 700 8 8 8 [+] picture button
zgc:112335 ENSDART00000024135 hypothetical protein LOC554127 [Source:RefSeq_peptide;Acc:NP_001019593]
16.487 -18.35 0.000000241838 240 7 8 20 [+] picture button
fign ENSDART00000023105 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q503S1]
16.0799 -17.43 0.000000277854 699 3 10 5 [+] picture button
TNFAIP3 ENSDART00000102859 Tumor necrosis factor, alpha-induced protein 3 (EC 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20). [Source:Uniprot/SWISSPROT;Acc:P21580]
15.861 -13.84 0.000000308488 700 3 1 3 [+] picture button
hsp47 ENSDART00000035096 heat shock protein 47 [Source:RefSeq_peptide;Acc:NP_571279]
16.4796 -17.43 0.000000590753 595 9 3 17 [+] picture button
zgc:110619 ENSDART00000045245 hypothetical protein LOC322113 [Source:RefSeq_peptide;Acc:NP_001018304]
16.3481 -13.94 0.000000911669 1330 4 1 4 [+] picture button
A2CEY2_DANRE ENSDART00000082364 Novel zinc finger protein. [Source:Uniprot/SPTREMBL;Acc:A2CEY2]
16.6976 -20.33 0.000001 700 12 1 2 [+] picture button
zgc:56622 ENSDART00000042775 hypothetical protein LOC326033 [Source:RefSeq_peptide;Acc:NP_956031]
15.9045 -17 0.000001 700 16 1 4 [+] picture button
ENSDART00000024131 NOT ANNOTATED
16.8013 -18.79 0.000001 700 17 1 2 [+] picture button
A2CEY2_DANRE ENSDART00000074776 Novel zinc finger protein. [Source:Uniprot/SPTREMBL;Acc:A2CEY2]
16.6976 -20.33 0.000001 700 14 1 4 [+] picture button
LOC566626 ENSDART00000053622 RING finger protein 139 (Translocation in renal carcinoma on chromosome 8). [Source:Uniprot/SWISSPROT;Acc:Q8WU17]RING finger protein 139 (Translocation in renal carcinoma on chromosome 8). [Source:Uniprot/SWISSPROT;Acc:Q8WU17] BY ORTHOLOGY TO:ENST00000303545
16.6976 -20.84 0.000001 700 15 1 4 [+] picture button
ENSDART00000099971 NOT ANNOTATED
16.8013 -18.79 0.000001 700 17 1 2 [+] picture button
sh3px3 ENSDART00000009971 SH3 and PX domain-containing 3-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4KUQ7]
16.8261 -24.12 0.000001 1802 9 1 2 [+] picture button
fam91a1 ENSDART00000019459 Protein FAM91A1. [Source:Uniprot/SWISSPROT;Acc:Q6TEP1]
15.3053 -15.62 0.00000110996 1268 4 1 4 [+] picture button
caprin2 ENSDART00000040708 Novel protein similar to human C1q domain containing 1 (C1QDC1). [Source:Uniprot/SPTREMBL;Acc:Q5RJ80]
15.726 -17.6 0.00000269308 700 13 1 21 [+] picture button
zgc:153980 ENSDART00000088928 hypothetical protein LOC561051 [Source:RefSeq_peptide;Acc:NP_001070037]
15.676 -17.89 0.00000297085 1204 5 1 5 [+] picture button
zgc:63849 ENSDART00000020908 hypothetical protein LOC323487 [Source:RefSeq_peptide;Acc:NP_955936]
15.9293 -13.95 0.00000302846 867 4 1 5 [+] picture button
zgc:110615 ENSDART00000009411 Protein BUD31 homolog (Protein G10 homolog). [Source:Uniprot/SWISSPROT;Acc:Q567Z7]
16.3733 -12.39 0.00000309861 184 4 3 7 [+] picture button
zgc:110528 ENSDART00000025198 Protein FAM119A. [Source:Uniprot/SWISSPROT;Acc:Q5BLD8]
18.761 -23.85 0.00000431926 240 8 2 17 [+] picture button
A4IGC6_DANRE ENSDART00000103737 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4IGC6]
15.7877 -16.62 0.0000045699 700 8 2 9 [+] picture button
pik3r1 ENSDART00000056213 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4QN75]
15.4308 -18.22 0.00000515121 2360 2 1 2 [+] picture button
uros ENSDART00000054094 uroporphyrinogen III synthase [Source:RefSeq_peptide;Acc:NP_997993]
15.4617 -17.69 0.0000054443 389 8 4 11 [+] picture button
dnmt8 ENSDART00000100320 DNA (cytosine-5-)-methyltransferase 8 [Source:RefSeq_peptide;Acc:NP_001018144]
17.621 -20.15 0.00000553381 318 7 3 14 [+] picture button
LOC798803 ENSDART00000058537 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555] BY ORTHOLOGY TO:ENSORLT00000003277
17.2161 -18.12 0.00000598585 700 14 6 11 [+] picture button
bckdha ENSDART00000059347 branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:RefSeq_peptide;Acc:NP_001019590]
16.1991 -16.33 0.00000671339 459 6 2 13 [+] picture button
eng1a ENSDART00000012506 Homeobox protein engrailed-1a (Eng1). [Source:Uniprot/SWISSPROT;Acc:Q04896]
15.5567 -16.16 0.00000673524 700 5 2 5 [+] picture button
znf598 ENSDART00000074757 Zinc finger protein 598. [Source:Uniprot/SWISSPROT;Acc:Q6PFK1]
15.5388 -11.85 0.00000726172 455 9 1 10 [+] picture button
zgc:77831 ENSDART00000035560 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q6P2T0]
16.4901 -16.7 0.0000080152 700 3 1 4 [+] picture button
ptc2 ENSDART00000007640 Patched-2 protein. [Source:Uniprot/SPTREMBL;Acc:Q9W6T6]
16.0753 -15.09 0.000008523 700 4 2 4 [+] picture button
zgc:56363 ENSDART00000101093 hypothetical protein LOC394103 [Source:RefSeq_peptide;Acc:NP_957422]
16.0753 -13.76 0.00000929917 700 7 1 7 [+] picture button
aicda ENSDART00000016834 activation-induced cytidine deaminase [Source:RefSeq_peptide;Acc:NP_001008403]
18.1925 -17.61 0.00000951167 192 8 2 16 [+] picture button
fabp3 ENSDART00000033724 fatty acid binding protein 3, muscle and heart [Source:RefSeq_peptide;Acc:NP_694493]
17.1692 -15.46 0.0000099305 226 5 2 13 [+] picture button
LOC794305 ENSDART00000029964 Proprotein convertase PACE4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9PT85]Proprotein convertase PACE4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9PT85] BY ORTHOLOGY TO:ENSGALT00000011615
15.9716 -15.71 0.0000123636 700 5 1 3 [+] picture button
Q502G7_DANRE ENSDART00000082084 LOC553462 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q502G7]
17.0321 -16.16 0.0000130454 383 7 1 9 [+] picture button
GRHL1 ENSDART00000087454 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
17.7559 -16.65 0.00001335 700 9 1 13 [+] picture button
zgc:85725 ENSDART00000009126 hypothetical protein LOC445289 [Source:RefSeq_peptide;Acc:NP_001003744]
15.6132 -16.18 0.0000142293 700 7 1 9 [+] picture button
zgc:92878 ENSDART00000056037 hypothetical protein LOC436749 [Source:RefSeq_peptide;Acc:NP_001002476]
15.8679 -16.52 0.0000169774 700 4 1 4 [+] picture button
sms ENSDART00000007205 spermine synthase [Source:RefSeq_peptide;Acc:NP_571831]
16.5973 -19.17 0.0000180987 809 7 1 7 [+] picture button
LOC569455 ENSDART00000058876 Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226]Karyopherin 3 CG1059-PA [Source:RefSeq_peptide;Acc:NP_524226] BY ORTHOLOGY TO:CG1059-RA
15.4426 -18.91 0.0000188064 700 7 1 7 [+] picture button
NP_001076285.2 ENSDART00000026162 hypothetical protein LOC558291 [Source:RefSeq_peptide;Acc:NP_001076285]
15.6815 -15.82 0.0000301273 700 4 2 7 [+] picture button
ins ENSDART00000051222 Insulin precursor [Contains: Insulin B chain; Insulin A chain]. [Source:Uniprot/SWISSPROT;Acc:O73727]
15.5773 -14.5 0.000034113 104 3 2 5 [+] picture button
dnajb11 ENSDART00000013282 DnaJ (Hsp40) homolog, subfamily B, member 11 [Source:RefSeq_peptide;Acc:NP_942116]
15.7929 -15.83 0.0000348872 1036 4 1 4 [+] picture button

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Download table: GFF TXT
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