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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-27c*

833 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
tirap ENSDART00000097258 MyD88 adaptor-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6TQG3]
16.0753 -14.71 0.000001 700 7 1 4 [+] picture button
tirap ENSDART00000097257 MyD88 adaptor-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6TQG3]
15.7642 -14.1 0.0000204419 700 4 1 3 [+] picture button
SLC16A10 (2 of 2) ENSDART00000082238 solute carrier family 16, member 10 [Source:RefSeq_peptide;Acc:NP_061063]
16.2311 -16.73 0.0000238288 700 7 1 5 [+] picture button
LOC794704 ENSDART00000027606 NOT ANNOTATED
18.4827 -20.39 0.0000252511 700 3 1 1 [+] picture button
LOC794704 ENSDART00000014465 Huntingtin-interacting protein 1 (HIP-I). [Source:Uniprot/SWISSPROT;Acc:O00291]Huntingtin-interacting protein 1 (HIP-I). [Source:Uniprot/SWISSPROT;Acc:O00291] BY ORTHOLOGY TO:ENST00000336926
18.4827 -20.39 0.0000252511 700 6 1 5 [+] picture button
opn1mw3 ENSDART00000000877 Green-sensitive opsin-3 (Green cone photoreceptor pigment 3) (Opsin-1, medium-wave-sensitive 3) (Opsin RH2-3). [Source:Uniprot/SWISSPROT;Acc:Q8AYM7]
17.3966 -10.98 0.0000798414 275 6 1 14 [+] picture button
nme4 ENSDART00000060404 non-metastatic cells 4, protein expressed in [Source:RefSeq_peptide;Acc:NP_957489]
17.6173 -19.4 0.0000899682 486 8 2 10 [+] picture button
LOC559804 ENSDART00000035713 NOT ANNOTATED
15.2869 -11.96 0.000140823 700 7 1 7 [+] picture button
LOC558892 ENSDART00000074244 NOT ANNOTATED
16.9277 -20.46 0.000147813 700 14 1 8 [+] picture button
smx5 ENSDART00000104394 smx5 [Source:RefSeq_peptide;Acc:NP_571571]
17.1693 -19.24 0.000215272 700 7 2 8 [+] picture button
trh ENSDART00000018054 Thyroliberin precursor [Contains: Prothyroliberin; Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)]. [Source:Uniprot/SWISSPROT;Acc:Q5EDF9]
16.1104 -15.86 0.000217391 700 7 1 8 [+] picture button
NP_001015063.1 ENSDART00000064966 snag1 protein [Source:RefSeq_peptide;Acc:NP_001015063]
16.5697 -14.92 0.000267787 525 6 1 6 [+] picture button
cutl1 ENSDART00000063329 cut-like 1 [Source:RefSeq_peptide;Acc:NP_001003514]
17.1022 -11.16 0.000378251 441 9 1 10 [+] picture button
slc7a6os ENSDART00000019991 Protein SLC7A6OS (Solute carrier family 7 member 6 opposite strand transcript homolog). [Source:Uniprot/SWISSPROT;Acc:Q5U3I2]
15.746 -19.69 0.00049753 361 7 1 14 [+] picture button
LOC564436 ENSDART00000085253 Midline 1 (Opitz/BBB syndrome). [Source:Uniprot/SPTREMBL;Acc:Q6DEU6]Midline 1 (Opitz/BBB syndrome). [Source:Uniprot/SPTREMBL;Acc:Q6DEU6] BY ORTHOLOGY TO:ENSXETT00000034265
16.5939 -15.84 0.000614535 700 6 1 4 [+] picture button
snx12 ENSDART00000003335 sorting nexin 12 [Source:RefSeq_peptide;Acc:NP_957417]
15.5827 -11.15 0.000663033 1193 7 1 7 [+] picture button
AADACL2 ENSDART00000093133 arylacetamide deacetylase-like 2 [Source:RefSeq_peptide;Acc:NP_997248]
15.5578 -13.8 0.000668183 700 10 1 11 [+] picture button
tbpl2 ENSDART00000051527 TATA box binding protein like 2 [Source:RefSeq_peptide;Acc:NP_999961]
15.3189 -10.42 0.000668747 326 11 2 17 [+] picture button
pycrl ENSDART00000002787 pyrroline-5-carboxylate reductase-like [Source:RefSeq_peptide;Acc:NP_001038403]
16.2215 -13.96 0.000755429 988 6 2 7 [+] picture button
si:busm1-112p11.1 ENSDART00000063488 zinc finger protein 609 [Source:RefSeq_peptide;Acc:NP_001025252]
18.3917 -20.28 0.000761714 700 5 1 4 [+] picture button
nat5 ENSDART00000057700 N-acetyltransferase 5 (EC 2.3.1.-). [Source:Uniprot/SWISSPROT;Acc:Q58ED9]
16.2596 -11.61 0.00089369 177 4 3 4 [+] picture button
ENSDART00000050971 NOT ANNOTATED
19.0768 -25.05 0.000956606 700 4 1 4 [+] picture button
ccnb1 ENSDART00000063357 cyclin B1 [Source:RefSeq_peptide;Acc:NP_571588]
15.7983 -16.46 0.000974538 591 5 1 5 [+] picture button
zgc:158157 ENSDART00000103947 death associated transcription factor 1-like [Source:RefSeq_peptide;Acc:NP_001073424]
16.2887 -18.26 0.00102705 700 6 1 5 [+] picture button
zgc:73056 ENSDART00000103842 hypothetical protein LOC393668 [Source:RefSeq_peptide;Acc:NP_956989]
16.3864 -10.46 0.00103122 700 6 1 6 [+] picture button
LOC792777 ENSDART00000104138 NOT ANNOTATED
16.179 -17.47 0.00103122 700 5 1 4 [+] picture button
LOC558983 ENSDART00000097627 NOT ANNOTATED
15.7875 -18.4 0.00118088 700 9 1 14 [+] picture button
zgc:103540 ENSDART00000098397 hypothetical protein LOC447870 [Source:RefSeq_peptide;Acc:NP_001004609]
16.5123 -11.69 0.00118225 700 4 1 2 [+] picture button
xrn2 ENSDART00000100246 5'-3' exoribonuclease 2 [Source:RefSeq_peptide;Acc:NP_001001944]
15.8628 -11.26 0.00123986 700 7 1 7 [+] picture button
zgc:158624 ENSDART00000087867 hypothetical protein LOC791190 [Source:RefSeq_peptide;Acc:NP_001074141]
16.0945 -15.94 0.00126295 700 7 2 8 [+] picture button
tlr2 ENSDART00000055006 toll-like receptor 2 [Source:RefSeq_peptide;Acc:NP_997977]
16.0321 -19.38 0.00130511 700 6 2 7 [+] picture button
cenpn ENSDART00000064080 hypothetical protein LOC368856 [Source:RefSeq_peptide;Acc:NP_001002341]
15.9906 -13.32 0.00156519 700 3 1 3 [+] picture button
zgc:153291 ENSDART00000090388 NADH-cytochrome b5 reductase 2 (EC 1.6.2.2) (b5R.2). [Source:Uniprot/SWISSPROT;Acc:Q0P487]
18.3062 -13.07 0.00156612 269 4 2 8 [+] picture button
cuedc2 ENSDART00000057529 CUE domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6TLH3]
16.1579 -11.99 0.00156612 561 7 1 10 [+] picture button
LOC796288 ENSDART00000058295 Relaxin-3 precursor (Prorelaxin R3) (Insulin-like peptide INSL7) (Insulin-like peptide 7) [Contains: Relaxin-3 B chain; Relaxin-3 A chain]. [Source:Uniprot/SWISSPROT;Acc:Q8BFS3]Relaxin-3 precursor (Prorelaxin R3) (Insulin-like peptide INSL7) (Insulin-like peptide 7) [Contains: Relaxin-3 B chain; Relaxin-3 A chain]. [Source:Uniprot/SWISSPROT;Acc:Q8BFS3] BY ORTHOLOGY TO:ENSRNOT00000007775
15.7295 -14.52 0.00158404 700 8 2 8 [+] picture button
LOC794652 ENSDART00000099088 RCC1 and BTB domain-containing protein 2 (Regulator of chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) (CHC1-L) (RCC1-like G exchanging factor). [Source:Uniprot/SWISSPROT;Acc:O95199]RCC1 and BTB domain-containing protein 2 (Regulator of chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) (CHC1-L) (RCC1-like G exchanging factor). [Source:Uniprot/SWISSPROT;Acc:O95199] BY ORTHOLOGY TO:SINFRUT00000151066
15.9225 -10.8 0.00158459 700 8 1 10 [+] picture button
OLFML2A ENSDART00000084439 olfactomedin-like 2A [Source:RefSeq_peptide;Acc:NP_872293]
15.8939 -16.13 0.00164027 700 7 1 8 [+] picture button
zgc:92657 ENSDART00000065566 hypothetical protein LOC445046 [Source:RefSeq_peptide;Acc:NP_001003440]
15.8047 -20.12 0.00190008 267 5 2 7 [+] picture button
si:dkey-3n7.4 ENSDART00000067409 Novel protein similar to vertebrate tropomodulin 1 (TMOD1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RGR5]
15.783 -9.91 0.00196936 700 6 1 7 [+] picture button
si:ch211-101l18.3 ENSDART00000063696 Si:ch211-101l18.3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q502E7]
15.7902 -13.86 0.0019703 793 6 1 6 [+] picture button
hacl1 ENSDART00000004031 2-hydroxyacyl-CoA lyase 1 [Source:RefSeq_peptide;Acc:NP_998250]
15.7642 -8.66 0.00203122 710 5 1 5 [+] picture button
A1L2C9_DANRE ENSDART00000048733 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A1L2C9]
17.78 -21.29 0.0020326 700 8 1 7 [+] picture button
zgc:77948 ENSDART00000055694 hypothetical protein LOC402979 [Source:RefSeq_peptide;Acc:NP_991242]
15.7615 -16.3 0.00204011 818 8 2 8 [+] picture button
mybbp1a ENSDART00000038767 Myb-binding protein 1A-like protein. [Source:Uniprot/SWISSPROT;Acc:Q6DRL5]
16.5123 -14.53 0.00214368 700 1 1 1 [+] picture button
zgc:153216 ENSDART00000087418 hypothetical protein LOC767722 [Source:RefSeq_peptide;Acc:NP_001070128]
18.7736 -20.44 0.00233255 433 9 2 19 [+] picture button
LOC563074 ENSDART00000058653 NOT ANNOTATED
15.8679 -13.52 0.0024126 700 5 1 4 [+] picture button
LOC563074 ENSDART00000048520 NOT ANNOTATED
15.8679 -13.52 0.0024126 700 5 1 4 [+] picture button
LOC563074 ENSDART00000058667 NOT ANNOTATED
15.8679 -13.52 0.0024126 700 5 1 4 [+] picture button
ssr2 ENSDART00000027785 signal sequence receptor, beta [Source:RefSeq_peptide;Acc:NP_001001399]
16.7794 -23.89 0.00249969 387 8 2 11 [+] picture button
LOC571208 ENSDART00000009653 NOT ANNOTATED
16.2528 -13.25 0.00255161 700 7 1 9 [+] picture button

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Download table: GFF TXT
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