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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-25

871 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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glra1 ENSDART00000047680 Glycine receptor subunit alphaZ1 precursor. [Source:Uniprot/SWISSPROT;Acc:O93430]
18.1925 -20.26 0.0000000015991 201 3 8 8 [+] picture button
LOC100000672 ENSDART00000100722 UPF0258 protein KIAA1024. [Source:Uniprot/SWISSPROT;Acc:Q9UPX6]UPF0258 protein KIAA1024. [Source:Uniprot/SWISSPROT;Acc:Q9UPX6] BY ORTHOLOGY TO:ENSMODT00000024672
16.5375 -17.71 0.00000000996431 700 3 1 4 [+] picture button
zgc:153304 ENSDART00000098562 Solute carrier family 25 member 42. [Source:Uniprot/SWISSPROT;Acc:Q0P483]
17.8514 -20.9 0.0000000544392 700 9 2 15 [+] picture button
si:dkey-80c24.6 ENSDART00000104043 hypothetical protein LOC100038765 [Source:RefSeq_peptide;Acc:NP_001083014]
15.9185 -8.43 0.000000142813 214 7 2 11 [+] picture button
pax9 ENSDART00000075936 paired box gene 9 [Source:RefSeq_peptide;Acc:NP_571373]
16.7428 -13.03 0.000000280532 727 8 1 11 [+] picture button
si:dkey-246a16.3 ENSDART00000090334 hypothetical protein LOC567457 [Source:RefSeq_peptide;Acc:NP_001038598]
15.8892 -15.44 0.000000550974 700 4 1 11 [+] picture button
si:ch211-197n10.2 ENSDART00000086298 hypothetical protein LOC562517 [Source:RefSeq_peptide;Acc:NP_001038452]
15.7013 -18.71 0.00000065652 1538 1 1 1 [+] picture button
hbs1l ENSDART00000053401 Hbs1-like [Source:RefSeq_peptide;Acc:NP_955970]
18.1925 -22.24 0.00000138304 252 6 1 16 [+] picture button
LOC556502 ENSDART00000003505 ADM precursor [Contains: Adrenomedullin (AM); Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)]. [Source:Uniprot/SWISSPROT;Acc:O77559]ADM precursor [Contains: Adrenomedullin (AM); Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)]. [Source:Uniprot/SWISSPROT;Acc:O77559] BY ORTHOLOGY TO:ENSCAFT00000012064
17.5273 -16.33 0.0000017796 700 11 1 16 [+] picture button
NP_001091856.1 ENSDART00000065293 hypothetical protein LOC558011 [Source:RefSeq_peptide;Acc:NP_001091856]
16.9954 -18.9 0.0000026976 700 4 4 7 [+] picture button
wdr51bl ENSDART00000023046 WD repeat domain 51B, like [Source:RefSeq_peptide;Acc:NP_001038243]
18.275 -21.43 0.00000394199 700 6 1 11 [+] picture button
XR_029565.1 ENSDART00000092979 hypothetical LOC566231 (LOC566231), mRNA [Source:RefSeq_dna;Acc:XR_029565]
15.5941 -12.37 0.00000579504 700 6 1 8 [+] picture button
LOC564657 ENSDART00000103222 Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7). [Source:Uniprot/SWISSPROT;Acc:P0C024]Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7). [Source:Uniprot/SWISSPROT;Acc:P0C024] BY ORTHOLOGY TO:ENSMMUT00000016527
16.8366 -22.37 0.00000693809 700 8 1 13 [+] picture button
vox ENSDART00000008176 ventral homeobox [Source:RefSeq_peptide;Acc:NP_571773]
17.1692 -13.91 0.00000782151 164 2 3 10 [+] picture button
FRY (2 of 2) ENSDART00000045921 Protein furry homolog. [Source:Uniprot/SWISSPROT;Acc:Q5TBA9]
17.4549 -18.14 0.00000834387 700 5 5 10 [+] picture button
LOC562169 ENSDART00000074034 Vacuolar protein sorting protein 54 (Protein scattered). [Source:Uniprot/SWISSPROT;Acc:Q9VLC0]Vacuolar protein sorting protein 54 (Protein scattered). [Source:Uniprot/SWISSPROT;Acc:Q9VLC0] BY ORTHOLOGY TO:CG3766-RA
15.8679 -23.41 0.00000897568 700 9 1 12 [+] picture button
NP_001029093.1 ENSDART00000076974 hypothetical protein LOC569945 [Source:RefSeq_peptide;Acc:NP_001029093]
15.7524 -16.14 0.00000900814 700 6 2 7 [+] picture button
LOC563744 ENSDART00000055981 Inward rectifier potassium channel 2 (Potassium channel, inwardly rectifying subfamily J member 2) (Inward rectifier K(+) channel Kir2.1) (Cardiac inward rectifier potassium channel) (IRK1). [Source:Uniprot/SWISSPROT;Acc:P63252]Inward rectifier potassium channel 2 (Potassium channel, inwardly rectifying subfamily J member 2) (Inward rectifier K(+) channel Kir2.1) (Cardiac inward rectifier potassium channel) (IRK1). [Source:Uniprot/SWISSPROT;Acc:P63252] BY ORTHOLOGY TO:ENSGACT00000014506
17.631 -15.03 0.00000931514 700 8 1 9 [+] picture button
klhl12 ENSDART00000043815 Kelch-like protein 12. [Source:Uniprot/SWISSPROT;Acc:Q5U374]
16.5297 -15.52 0.0000141726 772 7 1 9 [+] picture button
usp14 ENSDART00000032540 ubiquitin specific protease 14 [Source:RefSeq_peptide;Acc:NP_956267]
15.4291 -16.18 0.0000156496 585 9 2 15 [+] picture button
LOC560095 ENSDART00000085335 zinc finger, DHHC domain containing 9 [Source:RefSeq_peptide;Acc:NP_001034105]zinc finger, DHHC domain containing 9 [Source:RefSeq_peptide;Acc:NP_001034105] BY ORTHOLOGY TO:ENSRNOT00000006484
16.8213 -21.43 0.0000174083 700 2 1 3 [+] picture button
acadm ENSDART00000099233 acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain [Source:RefSeq_peptide;Acc:NP_998175]
15.9185 -10.59 0.0000261019 289 6 4 11 [+] picture button
bmp2b ENSDART00000100482 bone morphogenetic protein 2b [Source:RefSeq_peptide;Acc:NP_571435]
20.2392 -22.92 0.0000272028 362 5 5 10 [+] picture button
pdhb ENSDART00000006513 pyruvate dehydrogenase (lipoamide) beta [Source:RefSeq_peptide;Acc:NP_998319]
16.6007 -10.96 0.0000376755 290 11 2 17 [+] picture button
zgc:63810 ENSDART00000035409 UPF0418 protein C8orf70 homolog. [Source:Uniprot/SWISSPROT;Acc:Q7SXT7]
16.1207 -12.1 0.0000564725 937 4 3 5 [+] picture button
LOC570063 ENSDART00000075588 WD repeat protein 76. [Source:Uniprot/SWISSPROT;Acc:Q9H967]WD repeat protein 76. [Source:Uniprot/SWISSPROT;Acc:Q9H967] BY ORTHOLOGY TO:SINFRUT00000136646
15.6277 -20.38 0.0000570401 700 8 1 10 [+] picture button
angptl2 ENSDART00000098836 angiopoietin-like 2 [Source:RefSeq_peptide;Acc:NP_001012502]
16.4844 -15.07 0.0000572645 700 6 1 9 [+] picture button
zgc:158312 ENSDART00000084708 hypothetical protein LOC567913 [Source:RefSeq_peptide;Acc:NP_001073659]
16.2256 -12.63 0.0000604402 325 9 2 11 [+] picture button
si:ch211-250g4.1 ENSDART00000103151 hypothetical protein LOC557556 [Source:RefSeq_peptide;Acc:NP_001038179]
17.8663 -27.15 0.0000611305 700 11 1 14 [+] picture button
LOC558856 ENSDART00000092591 SEC22 vesicle trafficking protein homolog C isoform b [Source:RefSeq_peptide;Acc:NP_004197]SEC22 vesicle trafficking protein homolog C isoform b [Source:RefSeq_peptide;Acc:NP_004197] BY ORTHOLOGY TO:ENSXETT00000013555
16.8213 -14.87 0.0000672148 700 10 2 12 [+] picture button
cpvl ENSDART00000078984 carboxypeptidase, vitellogenic-like [Source:RefSeq_peptide;Acc:NP_954972]
16.1459 -17.31 0.0000768817 201 6 1 11 [+] picture button
cdo1 ENSDART00000098686 Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I). [Source:Uniprot/SWISSPROT;Acc:Q6NWZ9]
17.2829 -15.77 0.0000768885 700 6 1 11 [+] picture button
zgc:153609 ENSDART00000077903 hypothetical protein LOC751682 [Source:RefSeq_peptide;Acc:NP_001039030]
16.0977 -17.59 0.0000770341 308 9 2 13 [+] picture button
ENSDART00000105853 Sestrin-3. [Source:Uniprot/SWISSPROT;Acc:P58005]Sestrin-3. [Source:Uniprot/SWISSPROT;Acc:P58005] BY ORTHOLOGY TO:ENSGACT00000022526
15.8892 -15.09 0.0000885325 700 5 5 9 [+] picture button
fbxl22 ENSDART00000067114 F-box and leucine-rich repeat protein 22 [Source:RefSeq_peptide;Acc:NP_001013297]
15.4404 -12.93 0.0000895269 324 4 2 9 [+] picture button
d4st1 ENSDART00000063152 Carbohydrate sulfotransferase D4ST1 (EC 2.8.2.-) (Dermatan 4- sulfotransferase 1) (D4ST-1) (zD4ST-1). [Source:Uniprot/SWISSPROT;Acc:Q805E5]
15.7764 -20.52 0.0000898166 475 6 2 9 [+] picture button
zgc:76904 ENSDART00000062534 hypothetical protein LOC404633 [Source:RefSeq_peptide;Acc:NP_996984]
18.2182 -21.5 0.0000903944 687 8 5 13 [+] picture button
zgc:76988 ENSDART00000023867 hypothetical protein LOC323464 [Source:RefSeq_peptide;Acc:NP_997807]
18.3062 -21.41 0.0000930166 280 8 2 22 [+] picture button
zgc:112032 ENSDART00000033294 Zgc:112032. [Source:Uniprot/SPTREMBL;Acc:Q502L6]
16.4208 -15.66 0.000103668 686 4 1 7 [+] picture button
zgc:103699 ENSDART00000058971 hypothetical protein LOC492485 [Source:RefSeq_peptide;Acc:NP_001007358]
16.179 -18.41 0.000118743 700 3 1 5 [+] picture button
setd7 ENSDART00000056734 SET domain-containing protein 7 [Source:RefSeq_peptide;Acc:NP_001002456]
16.1458 -20.62 0.000140278 735 8 4 13 [+] picture button
im:7145112 ENSDART00000048095 Im:7145112 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DG69]
17.6531 -23.47 0.00018598 521 3 1 5 [+] picture button
opa3 ENSDART00000088488 optic atrophy 3 [Source:RefSeq_peptide;Acc:NP_001073635]
15.8216 -15.76 0.000199684 803 7 3 7 [+] picture button
JAKMIP2 ENSDART00000040169 Janus kinase and microtubule-interacting protein 2. [Source:Uniprot/SWISSPROT;Acc:Q96AA8]
15.9716 -19.35 0.000207196 700 6 1 9 [+] picture button
LIN52 ENSDART00000104332 Lin-52 homolog. [Source:Uniprot/SWISSPROT;Acc:Q52LA3]
16.5939 -15.91 0.000239556 700 5 1 6 [+] picture button
LOC561043 ENSDART00000091894 mannosidase, alpha, class 2A, member 2 [Source:RefSeq_peptide;Acc:NP_006113]mannosidase, alpha, class 2A, member 2 [Source:RefSeq_peptide;Acc:NP_006113] BY ORTHOLOGY TO:ENSMMUT00000046948
16.2056 -18.74 0.000243379 700 8 1 11 [+] picture button
zgc:63976 ENSDART00000009194 hypothetical protein LOC406647 [Source:RefSeq_peptide;Acc:NP_998503]
19.4075 -20.85 0.00024679 360 8 2 16 [+] picture button
si:dkeyp-72h1.1 ENSDART00000103907 hypothetical protein LOC799956 [Source:RefSeq_peptide;Acc:NP_001076404]
17.3457 -30.61 0.000254963 700 6 1 8 [+] picture button
mtap ENSDART00000054208 methylthioadenosine phosphorylase [Source:RefSeq_peptide;Acc:NP_956848]
17.5722 -12.82 0.000262147 360 7 2 13 [+] picture button
zgc:162723 ENSDART00000077373 LOC561776 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q05AL0]
17.2284 -21.51 0.000262553 642 7 1 11 [+] picture button

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Download table: GFF TXT
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