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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-20b

800 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
18.2727 -19.29 0.000000000119436 700 5 5 9 [+] picture button
LOC559017 ENSDART00000057211 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
16.3112 -21.56 0.00000000245466 700 6 3 11 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
16.7586 -17.43 0.00000000279167 700 6 1 14 [+] picture button
wee1 ENSDART00000060963 wee1 [Source:RefSeq_peptide;Acc:NP_001005770]
16.9962 -22.28 0.00000000543826 1018 4 3 6 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
17.2709 -18.82 0.0000000837416 433 10 2 15 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
16.4203 -15.46 0.000000649954 380 12 7 27 [+] picture button
LOC557798 ENSDART00000091105 Microfibrillar-associated protein 3-like precursor. [Source:Uniprot/SWISSPROT;Acc:Q6AYP2]Microfibrillar-associated protein 3-like precursor. [Source:Uniprot/SWISSPROT;Acc:Q6AYP2] BY ORTHOLOGY TO:ENSRNOT00000015759
16.0205 -22.87 0.000000727742 700 6 2 8 [+] picture button
LOC558364 ENSDART00000054187 NOT ANNOTATED
16.3243 -18.49 0.000001 700 6 1 11 [+] picture button
LOC558364 ENSDART00000054189 NOT ANNOTATED
16.2688 -18.49 0.000001 700 7 1 12 [+] picture button
Q1MT39_DANRE ENSDART00000085685 Novel protein similar to vertebratesirtuin (Silent mating type information regulation 2 homolog) 7 (S. cerevisiae) (SIRT7) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1MT39]
17.3668 -15.96 0.00000135086 700 5 2 8 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
17.8748 -20.12 0.00000149941 294 4 5 13 [+] picture button
MARCH8 ENSDART00000090430 E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII) (RING finger protein 178) (Cellular modulator of immune recognition) (c-MIR). [Source:Uniprot/SWISSPROT;Acc:Q5T0T0]
16.208 -13.99 0.00000428199 700 4 2 9 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
16.1778 -17.45 0.00000443471 247 7 3 16 [+] picture button
NP_001006079.1 ENSDART00000020270 hypothetical protein LOC450059 [Source:RefSeq_peptide;Acc:NP_001006079]
16.0767 -14.37 0.00000492334 669 9 4 13 [+] picture button
zgc:162267 ENSDART00000073399 hypothetical protein LOC100037371 [Source:RefSeq_peptide;Acc:NP_001082992]
16.9697 -13.62 0.00000575112 145 5 6 21 [+] picture button
zgc:113200 ENSDART00000022634 hypothetical protein LOC503759 [Source:RefSeq_peptide;Acc:NP_001013355]
16.9697 -15.73 0.00000622638 297 5 2 13 [+] picture button
sc4mol ENSDART00000078277 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q7ZW77]
15.9823 -9.62 0.00000737899 615 3 1 8 [+] picture button
si:ch73-264b7.2 ENSDART00000105675 TPR repeat-containing protein C18orf17 homolog. [Source:Uniprot/SWISSPROT;Acc:Q1LXE6]
17.1371 -25.14 0.00000760314 700 5 7 9 [+] picture button
zgc:92629 ENSDART00000054153 Density-regulated protein (DRP). [Source:Uniprot/SWISSPROT;Acc:Q6DH65]
16.0286 -16.71 0.0000100751 700 5 5 7 [+] picture button
zgc:101624 ENSDART00000082251 hypothetical protein LOC450071 [Source:RefSeq_peptide;Acc:NP_001006091]
17.2624 -14.63 0.0000178328 345 8 2 18 [+] picture button
LOC556324 ENSDART00000038120 Uncharacterized protein C10orf46. [Source:Uniprot/SWISSPROT;Acc:Q86Y37]Uncharacterized protein C10orf46. [Source:Uniprot/SWISSPROT;Acc:Q86Y37] BY ORTHOLOGY TO:ENST00000369151
16.0145 -17.63 0.0000187696 700 7 2 11 [+] picture button
PDZD3 (1 of 2) ENSDART00000078049 PDZ domain-containing protein 3 (PDZ domain-containing protein 2) (Intestinal and kidney-enriched PDZ protein). [Source:Uniprot/SWISSPROT;Acc:Q86UT5]
16.2492 -18.43 0.0000196368 700 4 1 7 [+] picture button
zgc:112535 ENSDART00000013682 hypothetical protein LOC541329 [Source:RefSeq_peptide;Acc:NP_001013475]
16.2451 -17.47 0.0000222482 445 7 3 14 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
17.3542 -12.15 0.0000225691 343 5 1 11 [+] picture button
LOC794722 ENSDART00000066587 Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3]Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3] BY ORTHOLOGY TO:ENSOANT00000008934
16.1263 -23.92 0.0000245737 700 4 5 8 [+] picture button
USP46 ENSDART00000066678 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
17.138 -24.64 0.0000249702 700 4 1 8 [+] picture button
aldh7a1 ENSDART00000009288 aldehyde dehydrogenase 7 family, member A1 [Source:RefSeq_peptide;Acc:NP_997889]
16.5172 -17.57 0.000028457 181 3 2 9 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
18.8929 -20.82 0.000029465 251 7 3 20 [+] picture button
zgc:153260 ENSDART00000103220 hypothetical protein LOC751643 [Source:RefSeq_peptide;Acc:NP_001038827]
16.4041 -7.96 0.0000397455 228 12 2 15 [+] picture button
zgc:114134 ENSDART00000034287 hypothetical protein LOC565499 [Source:RefSeq_peptide;Acc:NP_001020708]
16.0486 -15.14 0.0000399606 873 2 1 5 [+] picture button
si:dkey-246a16.3 ENSDART00000090334 hypothetical protein LOC567457 [Source:RefSeq_peptide;Acc:NP_001038598]
15.9196 -13.54 0.0000451892 700 4 1 11 [+] picture button
rel ENSDART00000077612 v-rel reticuloendotheliosis viral oncogene homolog [Source:RefSeq_peptide;Acc:NP_001001841]
16.4041 -13.35 0.0000495461 269 6 1 11 [+] picture button
zgc:55345 ENSDART00000098850 hypothetical protein LOC393096 [Source:RefSeq_peptide;Acc:NP_956422]
16.4303 -18.9 0.0000497785 630 8 1 15 [+] picture button
socs6l ENSDART00000012990 suppressor of cytokine signaling 6, like [Source:RefSeq_peptide;Acc:NP_955919]
16.3994 -20.63 0.0000529203 958 2 1 2 [+] picture button
LOC562580 ENSDART00000041054 leukocyte receptor cluster (LRC) member 1 [Source:MarkerSymbol;Acc:MGI:1917007]leukocyte receptor cluster (LRC) member 1 [Source:MarkerSymbol;Acc:MGI:1917007] BY ORTHOLOGY TO:ENSMUST00000038743
17.3436 -18.48 0.0000565772 700 4 3 9 [+] picture button
si:ch211-197g15.3 ENSDART00000088419 E3 ubiquitin-protein ligase MARCH2 (EC 6.3.2.-) (Membrane-associated RING finger protein 2) (Membrane-associated RING-CH protein II) (MARCH-II). [Source:Uniprot/SWISSPROT;Acc:Q1LVZ2]
16.3577 -23.36 0.0000589044 704 7 1 11 [+] picture button
fads2 ENSDART00000023278 Delta(5)/Delta(6) fatty acid desaturase (EC 1.14.19.-) (Delta-5/Delta- 6 fatty acid desaturase). [Source:Uniprot/SWISSPROT;Acc:Q9DEX7]
17.2182 -21.71 0.0000657102 472 4 1 11 [+] picture button
LOC100007152 ENSDART00000089410 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8] BY ORTHOLOGY TO:ENSBTAT00000029701
15.8281 -12.58 0.0000670147 700 7 4 9 [+] picture button
LOC100004341 ENSDART00000074399 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054]calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:RefSeq_peptide;Acc:NP_061054] BY ORTHOLOGY TO:ENSGACT00000010326
18.9431 -28.71 0.000068206 700 7 3 13 [+] picture button
invs ENSDART00000015688 Inversin. [Source:Uniprot/SWISSPROT;Acc:Q8UVC1]
16.9647 -15.21 0.0000693445 482 10 2 15 [+] picture button
LOC571024 ENSDART00000057039 Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750]Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750] BY ORTHOLOGY TO:SINFRUT00000178319
15.9854 -18.83 0.0000700394 700 6 1 7 [+] picture button
NP_001030144.1 ENSDART00000015449 hypothetical protein LOC556956 [Source:RefSeq_peptide;Acc:NP_001030144]
16.744 -17.98 0.0000746827 700 9 2 15 [+] picture button
pqlc3 ENSDART00000076410 PQ loop repeat containing 3 [Source:RefSeq_peptide;Acc:NP_001004615]
17.726 -20.81 0.000077628 578 10 1 19 [+] picture button
glra4b ENSDART00000006474 Glycine receptor, alpha 4b (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGE6]
19.0061 -20.35 0.0000789086 308 5 1 12 [+] picture button
zgc:63548 ENSDART00000079419 hypothetical protein LOC393574 [Source:RefSeq_peptide;Acc:NP_956896]
15.9387 -20.78 0.0000794112 700 8 1 10 [+] picture button
NP_001015065.1 ENSDART00000104236 ELKS [Source:RefSeq_peptide;Acc:NP_001015065]
16.6747 -20.68 0.0000796593 700 8 1 7 [+] picture button
NBEAL2 ENSDART00000044017 SQFE253. [Source:Uniprot/SPTREMBL;Acc:Q6UX91]
16.6209 -26.38 0.0000881996 700 7 3 10 [+] picture button
ENSDART00000083810 CDNA FLJ39533 fis, clone PUAEN2005110, weakly similar to Mus musculus otogelin mRNA. [Source:Uniprot/SPTREMBL;Acc:Q8N8G5]CDNA FLJ39533 fis, clone PUAEN2005110, weakly similar to Mus musculus otogelin mRNA. [Source:Uniprot/SPTREMBL;Acc:Q8N8G5] BY ORTHOLOGY TO:ENSORLT00000024479
18.6857 -24.18 0.0000902684 700 4 2 7 [+] picture button
zgc:92785 ENSDART00000102439 hypothetical protein LOC436820 [Source:RefSeq_peptide;Acc:NP_001002547]
17.9448 -27.03 0.0000927527 700 4 1 12 [+] picture button
dj383j4.3l ENSDART00000056667 Centromere protein L (CENP-L). [Source:Uniprot/SWISSPROT;Acc:Q6DRD4]
15.9515 -13.05 0.0000947178 225 1 2 4 [+] picture button

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Download table: GFF TXT
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