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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-18b

826 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:154043 ENSDART00000053576 hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750]
17.8741 -20.79 0.000000000128591 415 12 3 21 [+] picture button
zgc:110621 ENSDART00000039165 hypothetical protein LOC554088 [Source:RefSeq_peptide;Acc:NP_001019561]
17.3937 -19.09 0.000000016335 380 12 7 27 [+] picture button
zgc:158346 ENSDART00000089822 hypothetical protein LOC569430 [Source:RefSeq_peptide;Acc:NP_001073511]
16.5314 -24.68 0.0000000215846 583 10 1 16 [+] picture button
smad2 ENSDART00000044756 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Smad2). [Source:Uniprot/SWISSPROT;Acc:Q9I9P9]
17.9651 -18.06 0.0000000313699 258 3 1 8 [+] picture button
XYLT2 ENSDART00000082902 Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II) (XylT-II) (XT-II) (Peptide O-xylosyltransferase 1). [Source:Uniprot/SWISSPROT;Acc:Q9H1B5]
16.0753 -18.91 0.0000000527448 700 7 3 9 [+] picture button
LOC100001035 ENSDART00000105120 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1] BY ORTHOLOGY TO:ENSGACT00000003063
15.9716 -16.91 0.0000000927271 700 6 1 7 [+] picture button
zgc:112157 ENSDART00000016800 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q567C6]
18.9884 -14.83 0.000000108636 294 4 5 13 [+] picture button
LOC562150 ENSDART00000046913 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
17.258 -24.29 0.00000046294 700 6 1 14 [+] picture button
LOC558321 ENSDART00000091370 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5] BY ORTHOLOGY TO:SINFRUT00000141140
17.3668 -22.3 0.00000173467 700 10 4 16 [+] picture button
zgc:101644 ENSDART00000007914 hypothetical protein LOC494100 [Source:RefSeq_peptide;Acc:NP_001008643]
17.3547 -17.86 0.0000021175 433 10 2 15 [+] picture button
her6 ENSDART00000023613 hairy-related 6 [Source:RefSeq_peptide;Acc:NP_571154]
16.8281 -12.91 0.00000497785 312 8 4 17 [+] picture button
smad7 ENSDART00000009740 MAD, mothers against decapentaplegic homolog 7 [Source:RefSeq_peptide;Acc:NP_778257]
16.5522 -14.53 0.00000560548 327 5 9 15 [+] picture button
NP_001082884.1 ENSDART00000091397 hypothetical protein LOC567533 [Source:RefSeq_peptide;Acc:NP_001082884]
15.9436 -17.41 0.00000619747 700 6 1 7 [+] picture button
DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
16.8013 -21.69 0.00000689247 700 5 5 9 [+] picture button
chst10 ENSDART00000047211 Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST). [Source:Uniprot/SWISSPROT;Acc:Q6AXM1]
16.244 -11.55 0.00000956433 420 6 3 11 [+] picture button
LOC100002536 ENSDART00000103243 Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6]Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6] BY ORTHOLOGY TO:ENSXETT00000020982
16.4901 -14.83 0.0000107905 700 8 2 10 [+] picture button
LOC568361 ENSDART00000079232 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
15.9856 -14.58 0.0000109622 700 7 1 10 [+] picture button
si:dkey-27p7.2 ENSDART00000026152 hypothetical protein LOC570669 [Source:RefSeq_peptide;Acc:NP_001038672]
16.3864 -14.8 0.0000162457 700 9 3 13 [+] picture button
LOC565671 ENSDART00000013449 Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6]Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6] BY ORTHOLOGY TO:ENSCAFT00000006228
17.2161 -18.52 0.0000177795 700 8 2 11 [+] picture button
ccnb2 ENSDART00000052541 cyclin B2 [Source:RefSeq_peptide;Acc:NP_955462]
17.7377 -19.33 0.0000214709 247 7 3 16 [+] picture button
cdkn3 ENSDART00000057155 Cdkn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZWJ8]
17.3966 -19.06 0.0000225271 251 7 3 20 [+] picture button
MCM7 ENSDART00000105378 DNA replication licensing factor MCM7 (CDC47 homolog) (P1.1-MCM3). [Source:Uniprot/SWISSPROT;Acc:P33993]
17.3198 -21.97 0.0000235557 700 6 1 7 [+] picture button
LOC795942 ENSDART00000091547 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470]Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470] BY ORTHOLOGY TO:ENSMODT00000037481
16.0753 -17.7 0.0000262485 700 4 5 5 [+] picture button
zgc:154082 ENSDART00000059506 hypothetical protein LOC777711 [Source:RefSeq_peptide;Acc:NP_001071227]
18.5662 -17.03 0.000031744 343 5 1 11 [+] picture button
LOC100007152 ENSDART00000089410 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8] BY ORTHOLOGY TO:ENSBTAT00000029701
17.2523 -16.54 0.0000338138 700 7 4 9 [+] picture button
zgc:63557 ENSDART00000056634 hypothetical protein LOC393978 [Source:RefSeq_peptide;Acc:NP_957297]
17.1979 -20.55 0.000036266 594 1 4 5 [+] picture button
pqlc3 ENSDART00000076410 PQ loop repeat containing 3 [Source:RefSeq_peptide;Acc:NP_001004615]
16.0074 -15.8 0.0000384251 578 10 1 19 [+] picture button
eif4a3 ENSDART00000014887 DEAD (Asp-Glu-Ala-Asp) box polypeptide 48 [Source:RefSeq_peptide;Acc:NP_957372]
16.0322 -15.99 0.0000391307 177 4 1 5 [+] picture button
zgc:77855 ENSDART00000103214 hypothetical protein LOC393836 [Source:RefSeq_peptide;Acc:NP_957156]
16.8519 -16.5 0.0000468562 700 5 1 3 [+] picture button
tbpl1 ENSDART00000053534 TBP-like 1 [Source:RefSeq_peptide;Acc:NP_991285]
17.6698 -17.52 0.0000500597 612 9 1 10 [+] picture button
zgc:152659 ENSDART00000062656 hypothetical protein LOC751596 [Source:RefSeq_peptide;Acc:NP_001038806]
17.2829 -15.38 0.0000511163 282 10 2 20 [+] picture button
ccna1 ENSDART00000002166 cyclin A1 [Source:RefSeq_peptide;Acc:NP_997983]
15.9511 -12.41 0.0000534597 377 10 6 26 [+] picture button
zgc:153376 ENSDART00000091638 hypothetical protein LOC767772 [Source:RefSeq_peptide;Acc:NP_001070207]
16.1935 -18.42 0.000056373 747 10 1 10 [+] picture button
zgc:153228 ENSDART00000087494 hypothetical protein LOC566923 [Source:RefSeq_peptide;Acc:NP_001070639]
16.0261 -19.68 0.0000612126 301 7 1 14 [+] picture button
ZBTB47 ENSDART00000080495 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]
17.3405 -17.36 0.000064516 700 4 1 4 [+] picture button
dock7 ENSDART00000065149 hypothetical protein LOC568817 [Source:RefSeq_peptide;Acc:NP_001076330]
17.631 -27.42 0.0000699744 700 8 1 9 [+] picture button
LOC555755 ENSDART00000076172 NOT ANNOTATED
16.0753 -24.79 0.0000716303 700 4 1 2 [+] picture button
zgc:110325 ENSDART00000057507 hypothetical protein LOC550504 [Source:RefSeq_peptide;Acc:NP_001017806]
16.4604 -17.58 0.000077936 396 6 1 13 [+] picture button
zgc:122989 ENSDART00000067809 Zgc:122989 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q567J1]
16.5223 -17.06 0.0000962226 700 7 3 10 [+] picture button
LOC100004140 ENSDART00000106387 Protocadherin-15-CD3 isoform 8. [Source:Uniprot/SPTREMBL;Acc:Q0ZM05]Protocadherin-15-CD3 isoform 8. [Source:Uniprot/SPTREMBL;Acc:Q0ZM05] BY ORTHOLOGY TO:ENSGALT00000004355
16.1534 -17.89 0.000112114 645 6 3 9 [+] picture button
zgc:162565 ENSDART00000060116 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
18.4095 -18.83 0.000114022 700 4 1 2 [+] picture button
btg3 ENSDART00000100207 hypothetical protein LOC492479 [Source:RefSeq_peptide;Acc:NP_001007352]
16.8081 -22.24 0.000130956 700 4 6 13 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
16.1821 -13.44 0.00013175 524 7 4 15 [+] picture button
si:ch211-221n23.1 ENSDART00000056135 si:ch211-221n23.1 [Source:RefSeq_peptide;Acc:NP_001076421]
16.6465 -17.81 0.000139258 700 5 9 10 [+] picture button
zgc:162565 ENSDART00000097332 Sb:cb578 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6DHD4]
18.3027 -18.83 0.000146887 700 5 1 3 [+] picture button
acin1a ENSDART00000076470 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0V955]
16.3733 -15.53 0.000147742 700 8 1 4 [+] picture button
hif1a ENSDART00000018500 hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:RefSeq_peptide;Acc:NP_956527]
16.1317 -21.72 0.000188386 1484 1 1 1 [+] picture button
LOC563544 ENSDART00000085290 Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0]Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0] BY ORTHOLOGY TO:ENSORLT00000002129
16.7441 -17.54 0.000245502 700 3 4 6 [+] picture button
hes6 ENSDART00000023040 hairy and enhancer of split 6 [Source:RefSeq_peptide;Acc:NP_919381]
16.0945 -16.95 0.000268037 700 4 2 3 [+] picture button
arg2 ENSDART00000057377 arginase, type II [Source:RefSeq_peptide;Acc:NP_955905]
16.0285 -16.47 0.000323228 788 7 1 10 [+] picture button

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Download table: GFF TXT
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