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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-16c

723 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
ccne ENSDART00000007883 G1/S-specific cyclin-E. [Source:Uniprot/SWISSPROT;Acc:P47794]
16.4626 -15.38 0.00000000800024 653 7 9 8 [+] picture button
zgc:86716 ENSDART00000063786 hypothetical protein LOC415235 [Source:RefSeq_peptide;Acc:NP_001002145]
16.483 -15.43 0.0000000200656 527 6 1 11 [+] picture button
crsp7 ENSDART00000003801 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:RefSeq_peptide;Acc:NP_998224]
18.2541 -18.52 0.000000734642 383 10 9 19 [+] picture button
LOC100005093 ENSDART00000056784 NOT ANNOTATED
17.3908 -17.68 0.000001 700 6 1 4 [+] picture button
ENSDART00000103937 NOT ANNOTATED
17.3198 -17.68 0.000001 700 7 1 5 [+] picture button
ENSDART00000102700 NOT ANNOTATED
17.1692 -21.1 0.000001 700 16 1 17 [+] picture button
LOC569679 ENSDART00000088884 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4] BY ORTHOLOGY TO:ENSGALT00000005420
16.7454 -16.78 0.0000019745 700 3 7 4 [+] picture button
Q08BD0_DANRE ENSDART00000085046 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q08BD0]
16.3733 -11.94 0.00000380398 160 4 2 8 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
18.0788 -17.03 0.00000457471 209 7 2 17 [+] picture button
SVEP1 ENSDART00000076882 polydom [Source:RefSeq_peptide;Acc:NP_699197]
17.7347 -17.73 0.00000516793 700 4 7 10 [+] picture button
si:dkey-260n20.1 ENSDART00000044397 hypothetical protein LOC559505 [Source:RefSeq_peptide;Acc:NP_001038364]
16.5148 -14.73 0.00000541067 700 6 9 9 [+] picture button
eno1 ENSDART00000009337 enolase 1, (alpha) [Source:RefSeq_peptide;Acc:NP_997887]
16.2728 -18.63 0.00000645458 405 5 3 10 [+] picture button
ctsd ENSDART00000080423 cathepsin D [Source:RefSeq_peptide;Acc:NP_571785]
17.6756 -20.87 0.00000911498 388 9 4 16 [+] picture button
NP_001077297.1 ENSDART00000028854 hypothetical protein LOC559477 [Source:RefSeq_peptide;Acc:NP_001077297]
19.8981 -16.68 0.0000135729 230 7 2 11 [+] picture button
znf259 ENSDART00000063923 zinc finger protein 259 [Source:RefSeq_peptide;Acc:NP_998273]
17.8514 -17.32 0.0000177885 284 3 1 7 [+] picture button
LOC565314 ENSDART00000061961 Codanin-1. [Source:Uniprot/SWISSPROT;Acc:Q8IWY9]Codanin-1. [Source:Uniprot/SWISSPROT;Acc:Q8IWY9] BY ORTHOLOGY TO:ENSCAFT00000017777
17.0469 -20.82 0.0000237876 700 8 4 9 [+] picture button
CPEB2 ENSDART00000092757 Cytoplasmic polyadenylation element-binding protein 2 (CPE-binding protein 2) (CPE-BP2) (hCPEB-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z5Q1]
16.7874 -15.54 0.0000292334 700 4 5 8 [+] picture button
LOC569358 ENSDART00000003066 Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) (ARF nucleotide-binding site opener) (Protein ARNO) (ARF exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q99418]Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) (ARF nucleotide-binding site opener) (Protein ARNO) (ARF exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q99418] BY ORTHOLOGY TO:ENST00000325139
16.2827 -13.98 0.0000297464 700 7 2 8 [+] picture button
zgc:112131 ENSDART00000105615 hypothetical protein LOC553679 [Source:RefSeq_peptide;Acc:NP_001018488]
17.1868 -16.47 0.000035282 390 4 4 5 [+] picture button
th ENSDART00000040410 Tyrosine hydroxylase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6ZM47]
16.5686 -16.64 0.0000404472 700 10 1 16 [+] picture button
si:ch211-232d19.4 ENSDART00000089161 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY09]
16.905 -14.12 0.0000423361 700 3 1 5 [+] picture button
OSBPL1A (1 of 2) ENSDART00000075837 Oxysterol-binding protein-related protein 1 (OSBP-related protein 1) (ORP-1). [Source:Uniprot/SWISSPROT;Acc:Q9BXW6]
16.667 -17.55 0.000051194 700 6 2 8 [+] picture button
ENSDART00000077377 NOT ANNOTATED
17.3908 -17.68 0.0000535454 700 4 1 4 [+] picture button
mtx3 ENSDART00000028251 metaxin 3 [Source:RefSeq_peptide;Acc:NP_991184]
16.7605 -14.08 0.000057215 636 7 1 8 [+] picture button
ik ENSDART00000012396 IK cytokine [Source:RefSeq_peptide;Acc:NP_955883]
16.7602 -9.19 0.0000656772 330 9 2 20 [+] picture button
anapc5 ENSDART00000026592 anaphase promoting complex subunit 5 [Source:RefSeq_peptide;Acc:NP_955916]
16.6007 -12.94 0.0000740706 113 3 2 8 [+] picture button
zgc:110639 ENSDART00000037293 hypothetical protein LOC553642 [Source:RefSeq_peptide;Acc:NP_001018451]
16.3393 -16.35 0.0000747357 700 6 1 8 [+] picture button
tpd52l2 ENSDART00000005366 tumor protein D52-like 2 isoform 1 [Source:RefSeq_peptide;Acc:NP_955876]
16.3799 -20.65 0.0000768458 1462 3 1 4 [+] picture button
zgc:158618 ENSDART00000087684 hypothetical protein LOC570062 [Source:RefSeq_peptide;Acc:NP_001073665]
17.7872 -14.4 0.0000880073 499 2 1 4 [+] picture button
zgc:103407 ENSDART00000028618 mothers against decapentaplegic homolog 8 protein, sma8 protein [Source:RefSeq_peptide;Acc:NP_001004014]
16.6665 -19.21 0.0000936287 441 13 2 22 [+] picture button
USP19 ENSDART00000020925 Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15) (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O94966]
16.878 -20.82 0.000103096 700 7 1 10 [+] picture button
zgc:112524 ENSDART00000076800 hypothetical protein LOC407699 [Source:RefSeq_peptide;Acc:NP_001017401]
16.2163 -14.94 0.000108409 503 5 1 8 [+] picture button
zgc:91862 ENSDART00000073648 hypothetical protein LOC445075 [Source:RefSeq_peptide;Acc:NP_001003469]
17.5838 -19.31 0.000112518 324 11 2 22 [+] picture button
zgc:153385 ENSDART00000086490 hypothetical protein LOC767654 [Source:RefSeq_peptide;Acc:NP_001070062]
16.5139 -17.83 0.000113327 700 9 1 10 [+] picture button
gfra1b ENSDART00000005456 gdnf family receptor alpha 1b [Source:RefSeq_peptide;Acc:NP_571806]
16.649 -18.88 0.000130022 700 5 1 7 [+] picture button
LOC565568 ENSDART00000085318 NOT ANNOTATED
16.8917 -16.32 0.000130488 700 10 1 14 [+] picture button
LOC796380 ENSDART00000083129 translation initiation factor 3, subunit S9, putativetranslation initiation factor 3, subunit S9, putative BY ORTHOLOGY TO:AAEL007718-RA
17.047 -19.68 0.000134667 700 7 1 10 [+] picture button
si:dkey-72g4.2 ENSDART00000061233 hypothetical protein LOC100038781 [Source:RefSeq_peptide;Acc:NP_001083030]
17.2012 -20.13 0.000138411 700 3 1 6 [+] picture button
tnfaip1 ENSDART00000060935 tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:RefSeq_peptide;Acc:NP_956093]
16.3193 -15.59 0.00014807 599 9 2 14 [+] picture button
LOC796288 ENSDART00000058295 Relaxin-3 precursor (Prorelaxin R3) (Insulin-like peptide INSL7) (Insulin-like peptide 7) [Contains: Relaxin-3 B chain; Relaxin-3 A chain]. [Source:Uniprot/SWISSPROT;Acc:Q8BFS3]Relaxin-3 precursor (Prorelaxin R3) (Insulin-like peptide INSL7) (Insulin-like peptide 7) [Contains: Relaxin-3 B chain; Relaxin-3 A chain]. [Source:Uniprot/SWISSPROT;Acc:Q8BFS3] BY ORTHOLOGY TO:ENSRNOT00000007775
16.3545 -11.63 0.000151349 700 8 2 8 [+] picture button
zgc:77004 ENSDART00000014753 hypothetical protein LOC406608 [Source:RefSeq_peptide;Acc:NP_998481]
16.9901 -21.05 0.000154252 667 7 1 9 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.1692 -13.63 0.000160659 276 10 3 15 [+] picture button
eef1d ENSDART00000002962 Eef1d protein. [Source:Uniprot/SPTREMBL;Acc:Q4V9J7]
17.3966 -17.22 0.000168964 91 2 4 6 [+] picture button
zgc:162756 ENSDART00000043452 hypothetical protein LOC565994 [Source:RefSeq_peptide;Acc:NP_001038558]
17.3159 -15.66 0.000176906 700 6 3 9 [+] picture button
SETX ENSDART00000082314 Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7Z333]
16.8239 -17.29 0.000184442 700 7 1 10 [+] picture button
acox3 ENSDART00000056745 pristanoyl acyl-Coenzyme A oxidase 3 [Source:RefSeq_peptide;Acc:NP_998312]
16.9418 -14.43 0.000209025 700 10 2 13 [+] picture button
A2BH14_DANRE ENSDART00000092613 Novel protein similar to vertebrate glutamate receptor, ionotropic, N- methyl D-aspartate 2B (GRIN2B). [Source:Uniprot/SPTREMBL;Acc:A2BH14]
16.5628 -17.25 0.000231974 700 9 5 12 [+] picture button
SLC30A10 ENSDART00000052076 solute carrier family 30 (zinc transporter), member 10 [Source:RefSeq_peptide;Acc:NP_061183]
16.3562 -18.81 0.000285314 700 4 2 7 [+] picture button
NP_001076320.1 ENSDART00000051224 hypothetical protein LOC567170 [Source:RefSeq_peptide;Acc:NP_001076320]
17.0087 -16.41 0.000305982 700 9 1 9 [+] picture button
ADAMTS1 ENSDART00000060939 ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). [Source:Uniprot/SWISSPROT;Acc:Q9UHI8]
16.5939 -18.44 0.000326253 700 10 3 14 [+] picture button

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Download table: GFF TXT
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