spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-133a*

699 hits found.


Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
sec31p ENSDART00000054812 sec31p homolog [Source:RefSeq_peptide;Acc:NP_955824]
15.9458 -14.92 0.0000147569 335 8 1 12 [+] picture button
LOC562434 ENSDART00000057120 Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA9]Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA9] BY ORTHOLOGY TO:ENSORLT00000017004
16.7175 -16.54 0.0000181539 700 8 1 6 [+] picture button
st8sia3 ENSDART00000066623 Alpha-2,8-sialyltransferase ST8Sia III (EC 2.4.99.8) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6KC05]
15.5567 -16.1 0.0000460873 700 6 1 4 [+] picture button
Q3B7Q6_DANRE ENSDART00000053272 LOC560222 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3B7Q6]
17.3966 -15.09 0.0000545237 298 6 2 8 [+] picture button
A2BGD0_DANRE ENSDART00000099337 Novel protein similar to vertebrate Rho GTPase activating protein 20 (ARHGAP20) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BGD0]
16.3864 -20.23 0.0000838384 700 5 1 3 [+] picture button
LOC799131 ENSDART00000075087 NOT ANNOTATED
15.5567 -16.43 0.000107798 700 9 1 5 [+] picture button
LOC568955 ENSDART00000081907 Homolog of Homo sapiens "Zinc finger protein 513 [Source:IPI;Acc:IPI00328854]"Homolog of Homo sapiens "Zinc finger protein 513 [Source:IPI;Acc:IPI00328854]" BY ORTHOLOGY TO:SINFRUT00000163649
16.7063 -15.81 0.000218331 700 17 2 7 [+] picture button
reep3 ENSDART00000106356 Receptor expression-enhancing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7ZVX5]
17.245 -19.64 0.000260553 700 3 1 3 [+] picture button
reep3 ENSDART00000021628 Receptor expression-enhancing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7ZVX5]
17.12 -19.64 0.000331244 758 4 1 3 [+] picture button
LOC567691 ENSDART00000077080 protein tyrosine phosphatase 4a3 [Source:MarkerSymbol;Acc:MGI:1277098]protein tyrosine phosphatase 4a3 [Source:MarkerSymbol;Acc:MGI:1277098] BY ORTHOLOGY TO:ENSMUST00000053232
16.1462 -16.96 0.000427601 700 5 2 4 [+] picture button
CADM2 (2 of 2) ENSDART00000015949 immunoglobulin superfamily, member 4D [Source:RefSeq_peptide;Acc:NP_694854]
16.9869 -23.85 0.000437341 700 6 1 6 [+] picture button
nrp1b ENSDART00000037315 neuropilin 1b [Source:RefSeq_peptide;Acc:NP_991237]
16.3255 -14.71 0.000466285 700 5 1 5 [+] picture button
zgc:154046 ENSDART00000040021 hypothetical protein LOC562075 [Source:RefSeq_peptide;Acc:NP_001073466]
16.2827 -17.2 0.000507502 700 7 1 6 [+] picture button
zgc:154046 ENSDART00000098567 hypothetical protein LOC562075 [Source:RefSeq_peptide;Acc:NP_001073466]
16.2827 -17.2 0.000507502 700 9 1 10 [+] picture button
cyp2k6 ENSDART00000055979 cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:RefSeq_peptide;Acc:NP_956803]
20.3529 -18.84 0.00051966 298 10 1 14 [+] picture button
march5l ENSDART00000039187 E3 ubiquitin-protein ligase MARCH5 (EC 6.3.2.-) (Membrane-associated RING finger protein 5) (Membrane-associated RING-CH protein V) (MARCH- V). [Source:Uniprot/SWISSPROT;Acc:Q6NYK8]
17.7412 -16.17 0.000611567 420 9 1 11 [+] picture button
XR_030051.1 ENSDART00000038499 hypothetical protein LOC100006895 (LOC100006895), mRNA [Source:RefSeq_dna;Acc:XR_030051]
16.2827 -16.99 0.000623072 700 7 1 8 [+] picture button
XR_030057.1 ENSDART00000061058 hypothetical protein LOC100006925 (LOC100006925), mRNA [Source:RefSeq_dna;Acc:XR_030057]
16.2827 -16.99 0.000623072 700 7 1 8 [+] picture button
retsatl ENSDART00000081362 Histone H3.2. [Source:Uniprot/SWISSPROT;Acc:Q4QRF4]
16.1512 -20.04 0.000658272 700 5 1 5 [+] picture button
zgc:92465 ENSDART00000057735 hypothetical protein LOC445102 [Source:RefSeq_peptide;Acc:NP_001003496]
20.0118 -20.74 0.000735283 206 5 1 7 [+] picture button
zgc:154018 ENSDART00000099298 hypothetical protein LOC767791 [Source:RefSeq_peptide;Acc:NP_001070226]
16.4781 -15.89 0.00074488 566 4 1 5 [+] picture button
LOC565462 ENSDART00000081789 NOT ANNOTATED
16.0753 -18.09 0.000764457 700 6 1 5 [+] picture button
LOC565462 ENSDART00000081808 NOT ANNOTATED
16.0753 -18.09 0.000764457 700 6 1 5 [+] picture button
h2afv ENSDART00000074487 Histone H2AV (H2A.F/Z). [Source:Uniprot/SWISSPROT;Acc:Q71PD7]
16.0607 -10.18 0.000786703 367 8 8 9 [+] picture button
zgc:55580 ENSDART00000052134 Basic leucine zipper and W2 domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q1LUC1]
16.0367 -17.32 0.000824753 347 7 2 10 [+] picture button
ENSDART00000102700 NOT ANNOTATED
16.0322 -9.42 0.000832166 700 16 1 17 [+] picture button
zgc:112091 ENSDART00000020381 hypothetical protein LOC550452 [Source:RefSeq_peptide;Acc:NP_001017756]
16.0003 -14.27 0.000885937 688 6 1 7 [+] picture button
zgc:103474 ENSDART00000059736 hypothetical protein LOC450004 [Source:RefSeq_peptide;Acc:NP_001006025]
17.507 -15.85 0.00088886 541 4 1 5 [+] picture button
smpd4 ENSDART00000048959 Sphingomyelin phosphodiesterase 4 (EC 3.1.4.12) (Neutral sphingomyelinase 3) (Neutral sphingomyelinase III) (nSMase3) (nSMase- 3). [Source:Uniprot/SWISSPROT;Acc:Q6PFJ7]
16.905 -10.05 0.000937249 700 6 1 3 [+] picture button
LOC565113 ENSDART00000055440 Complement C1q tumor necrosis factor-related protein 6 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BXI9]Complement C1q tumor necrosis factor-related protein 6 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BXI9] BY ORTHOLOGY TO:ENSGACT00000010614
17.1124 -19.28 0.000937249 700 4 1 3 [+] picture button
si:dkey-261e22.1 ENSDART00000007103 Novel protein similar to vertebrate protein kinase family (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RH93]
17.1124 -15.81 0.000937249 700 6 1 5 [+] picture button
zgc:112091 ENSDART00000103594 hypothetical protein LOC550452 [Source:RefSeq_peptide;Acc:NP_001017756]
15.9716 -14.27 0.000937249 700 5 1 4 [+] picture button
ENSDART00000054668 NOT ANNOTATED
15.9383 -14.9 0.00100039 700 7 1 5 [+] picture button
anxa1c ENSDART00000097301 annexin A1c [Source:RefSeq_peptide;Acc:NP_861425]
15.9255 -12.95 0.00102584 700 8 1 7 [+] picture button
zgc:92648 ENSDART00000044150 hypothetical protein LOC436706 [Source:RefSeq_peptide;Acc:NP_001002433]
15.9185 -12.6 0.00104008 241 3 1 5 [+] picture button
zgc:110528 ENSDART00000025198 Protein FAM119A. [Source:Uniprot/SWISSPROT;Acc:Q5BLD8]
16.2596 -13.74 0.0010511 240 8 2 17 [+] picture button
LOC100005108 ENSDART00000078228 NOT ANNOTATED
16.3864 -15.21 0.00114819 700 9 1 8 [+] picture button
LOC100005108 ENSDART00000045602 Homolog of Anguilla japonica "Solute carrier family 26 member 6 b. [Source:Uniprot/SPTREMBL;Acc:Q6L968]"Homolog of Anguilla japonica "Solute carrier family 26 member 6 b. [Source:Uniprot/SPTREMBL;Acc:Q6L968]" BY ORTHOLOGY TO:SINFRUT00000149916
16.3864 -15.21 0.00114819 700 8 1 7 [+] picture button
NP_001073673.1 ENSDART00000061572 cytochrome P45011B [Source:RefSeq_peptide;Acc:NP_001073673]
15.8634 -11.57 0.00115825 700 6 1 8 [+] picture button
LOC563907 ENSDART00000093113 Homolog of Homo sapiens "Splice Isoform 1 of Anthrax toxin receptor 1 precursor [Source:IPI;Acc:IPI00030431]"Homolog of Homo sapiens "Splice Isoform 1 of Anthrax toxin receptor 1 precursor [Source:IPI;Acc:IPI00030431]" BY ORTHOLOGY TO:SINFRUT00000149028
16.179 -14.11 0.00117233 700 8 2 8 [+] picture button
zgc:77948 ENSDART00000055694 hypothetical protein LOC402979 [Source:RefSeq_peptide;Acc:NP_991242]
15.8639 -16.67 0.0011842 818 8 2 8 [+] picture button
mxa ENSDART00000103588 Interferon-induced GTP-binding protein MxA (Interferon-inducible MxA protein) (IFN-inducible antiviral protein MxA). [Source:Uniprot/SWISSPROT;Acc:Q8JH68]
15.809 -10.71 0.00128785 501 4 1 5 [+] picture button
Q498V8_DANRE ENSDART00000103226 LOC558508 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q498V8]
16.2597 -12.73 0.00129025 327 7 1 8 [+] picture button
atp5s ENSDART00000006923 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s [Source:RefSeq_peptide;Acc:NP_956512]
16.487 -15.05 0.00129461 250 7 1 16 [+] picture button
runx3 ENSDART00000074750 runt-related transcription factor 3 [Source:RefSeq_peptide;Acc:NP_571679]
15.8047 -8.27 0.00129864 256 6 1 6 [+] picture button
psmc1b ENSDART00000063950 proteasome (prosome, macropain) 26S subunit, ATPase, 1b [Source:RefSeq_peptide;Acc:NP_001002091]
15.8047 -14.58 0.00129864 142 4 1 4 [+] picture button
A2CEY7_DANRE ENSDART00000097278 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2CEY7]
17.2386 -11.67 0.00130897 387 9 1 9 [+] picture button
zgc:85609 ENSDART00000067323 hyaluronan and proteoglycan link protein 3 [Source:RefSeq_peptide;Acc:NP_998266]
15.8679 -12.94 0.00140536 700 8 2 10 [+] picture button
NP_001038690.1 ENSDART00000082510 similar to UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 [Source:RefSeq_peptide;Acc:NP_001038690]
16.0753 -13.15 0.00140536 700 9 2 10 [+] picture button
zgc:123075 ENSDART00000065585 Tubulin-specific chaperone E (Tubulin-folding cofactor E). [Source:Uniprot/SWISSPROT;Acc:Q5U378]
16.0753 -17.66 0.00150899 700 4 1 4 [+] picture button

Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Download table: GFF TXT
spacer
spacer