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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-130b

854 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
zgc:153017 ENSDART00000084381 hypothetical protein LOC568207 [Source:RefSeq_peptide;Acc:NP_001070641]
17.204 -16.83 0.0000000237054 619 10 4 16 [+] picture button
rtcd1 ENSDART00000021666 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_955830]
16.4459 -12.72 0.0000000593929 747 7 3 7 [+] picture button
zgc:101524 ENSDART00000011922 Speckle-type POZ protein-like A (HIB homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q5BL35]
17.1088 -18.57 0.000000127772 1064 6 1 6 [+] picture button
rbpms2 ENSDART00000024062 Cytoplasmic polyadenylation element-binding protein 1 (CPE-binding protein 1) (CPE-BP1) (CPEB-1) (Protein Zorba) (Zebrafish orb-type a) (ZOR-1) (Orb/CPEB-related RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q9YGX5]
16.5417 -14.6 0.000000208204 1068 6 9 7 [+] picture button
hoxa3a ENSDART00000052633 Homeobox protein Hox-A3a. [Source:Uniprot/SWISSPROT;Acc:Q8AWZ2]
16.5865 -13.48 0.000000334752 719 11 4 14 [+] picture button
fabp2 ENSDART00000027973 fatty acid binding protein 2, intestinal [Source:RefSeq_peptide;Acc:NP_571506]
17.5103 -16.59 0.000000677828 205 8 2 20 [+] picture button
si:ch211-221n23.1 ENSDART00000056135 si:ch211-221n23.1 [Source:RefSeq_peptide;Acc:NP_001076421]
16.1164 -12.93 0.000000683861 700 5 9 10 [+] picture button
parp3 ENSDART00000022949 poly (ADP-ribose) polymerase family, member 3 [Source:RefSeq_peptide;Acc:NP_956795]
16.0641 -8.6 0.000000942003 788 4 5 5 [+] picture button
tdh ENSDART00000025509 L-threonine dehydrogenase [Source:RefSeq_peptide;Acc:NP_998410]
16.1303 -16.5 0.00000619929 876 6 3 6 [+] picture button
gpr98 ENSDART00000008043 G-protein coupled receptor 98 precursor (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1). [Source:Uniprot/SWISSPROT;Acc:Q6JAN0]
16.7144 -13.74 0.00000634416 254 5 8 12 [+] picture button
LOC564424 ENSDART00000089870 Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1). [Source:Uniprot/SWISSPROT;Acc:P35610]Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1). [Source:Uniprot/SWISSPROT;Acc:P35610] BY ORTHOLOGY TO:ENSOANT00000001516
17.676 -17.29 0.00000763508 700 8 1 12 [+] picture button
nudt9 ENSDART00000103744 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:RefSeq_peptide;Acc:NP_998517]
17.5051 -18.17 0.00000777568 378 11 2 24 [+] picture button
gap43 ENSDART00000025036 growth associated protein 43 [Source:RefSeq_peptide;Acc:NP_571416]
18.7664 -21.02 0.00000942136 700 7 2 14 [+] picture button
PTPRG ENSDART00000092552 Receptor-type tyrosine-protein phosphatase gamma precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma). [Source:Uniprot/SWISSPROT;Acc:P23470]
16.042 -15.43 0.0000103356 700 5 12 8 [+] picture button
zgc:92656 ENSDART00000102482 hypothetical protein LOC436700 [Source:RefSeq_peptide;Acc:NP_001002427]
17.2829 -18.84 0.000011208 144 6 2 9 [+] picture button
dlx5a ENSDART00000062026 Homeobox protein Dlx5a (DLX-4) (Distal-less homeobox protein 5a). [Source:Uniprot/SWISSPROT;Acc:P50576]
17.2829 -12.91 0.0000121881 283 6 11 10 [+] picture button
zgc:110308 ENSDART00000100567 Methionine adenosyltransferase 2 subunit beta (Methionine adenosyltransferase II beta) (MAT II beta) (Methionine adenosyltransferase 2 beta subunit). [Source:Uniprot/SWISSPROT;Acc:Q5BJJ6]
16.3095 -17.6 0.000015859 700 3 1 4 [+] picture button
chac1 ENSDART00000103330 Cation transport regulator-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SPB6]
16.5014 -10.35 0.0000174059 455 11 5 16 [+] picture button
zgc:77057 ENSDART00000063150 hypothetical protein LOC334166 [Source:RefSeq_peptide;Acc:NP_999870]
16.4957 -18.41 0.0000193736 1212 2 4 3 [+] picture button
oaz1 ENSDART00000105532 Ornithine decarboxylase antizyme 1 (ODC antizyme, short form) (ODC-Az- S). [Source:Uniprot/SWISSPROT;Acc:Q9YI98]
16.492 -13.04 0.0000196528 486 9 6 11 [+] picture button
zgc:110130 ENSDART00000057278 Uncharacterized protein C2orf33 homolog A. [Source:Uniprot/SWISSPROT;Acc:Q503U3]
16.3158 -10.14 0.0000212467 407 6 3 10 [+] picture button
A2BHH5_DANRE ENSDART00000082577 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2BHH5]
17.2059 -11.9 0.0000248277 700 6 1 7 [+] picture button
wnt10a ENSDART00000007308 Protein Wnt-10a precursor. [Source:Uniprot/SWISSPROT;Acc:P43446]
17.624 -13.72 0.0000270609 256 6 2 11 [+] picture button
pgd ENSDART00000017728 phosphogluconate hydrogenase isoform 1 [Source:RefSeq_peptide;Acc:NP_998618]
17.831 -15.63 0.000028035 339 9 7 19 [+] picture button
LOC100006896 ENSDART00000033206 Collagenase 3 precursor (EC 3.4.24.-) (Matrix metalloproteinase-13) (MMP-13). [Source:Uniprot/SWISSPROT;Acc:P45452]Collagenase 3 precursor (EC 3.4.24.-) (Matrix metalloproteinase-13) (MMP-13). [Source:Uniprot/SWISSPROT;Acc:P45452] BY ORTHOLOGY TO:ENSGACT00000008559
16.5939 -12.56 0.0000298873 700 5 1 7 [+] picture button
ube2d1 ENSDART00000048853 hypothetical protein LOC394085 [Source:RefSeq_peptide;Acc:NP_957404]
16.953 -11.54 0.0000329119 365 3 6 7 [+] picture button
si:ch211-242m18.4 ENSDART00000079695 si:ch211-242m18.4 (si:ch211-242m18.4), misc RNA [Source:RefSeq_dna;Acc:XR_030069]
17.2829 -17.39 0.0000358329 165 5 1 7 [+] picture button
si:dkey-211c3.1 ENSDART00000089836 Novel protein similar to vertebrate Jumonji, AT rich interactive domain 2 (JARID2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LVC2]
16.8256 -16.84 0.000036375 700 8 5 17 [+] picture button
rln3 ENSDART00000087803 relaxin 3 [Source:RefSeq_peptide;Acc:NP_001032892]
16.2596 -13.11 0.0000375287 195 5 2 11 [+] picture button
ENSDART00000105381 NOT ANNOTATED
17.8694 -16.53 0.0000462103 700 6 1 7 [+] picture button
si:dkeyp-11g8.5 ENSDART00000061637 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RG85]
17.551 -15.48 0.0000489188 438 6 1 12 [+] picture button
zgc:153367 ENSDART00000104708 hypothetical protein LOC767657 [Source:RefSeq_peptide;Acc:NP_001070065]
16.3492 -13.4 0.0000502753 535 10 1 13 [+] picture button
arl6ip1 ENSDART00000058955 ADP-ribosylation factor-like 6 interacting protein [Source:RefSeq_peptide;Acc:NP_957406]
16.1084 -19.05 0.0000509469 810 2 2 5 [+] picture button
nfe2l2 ENSDART00000062854 nuclear factor (erythroid-derived 2)-like 2 [Source:RefSeq_peptide;Acc:NP_878309]
16.6768 -11.47 0.0000562371 395 10 4 15 [+] picture button
pdcd5 ENSDART00000039495 programmed cell death 5 [Source:RefSeq_peptide;Acc:NP_957471]
16.5352 -9 0.000063532 330 9 2 16 [+] picture button
pvalb2 ENSDART00000010144 Parvalbumin-2 (Parvalbumin beta). [Source:Uniprot/SWISSPROT;Acc:Q9I8V0]
18.1925 -20.62 0.0000652083 234 3 1 11 [+] picture button
zgc:56152 ENSDART00000031253 hypothetical protein LOC394173 [Source:RefSeq_peptide;Acc:NP_957492]
18.3062 -18.14 0.0000672328 179 5 1 7 [+] picture button
cpox ENSDART00000089172 coproporphyrinogen oxidase [Source:RefSeq_peptide;Acc:NP_001035183]
16.2469 -16.89 0.0000798037 559 6 2 12 [+] picture button
PPEF1 ENSDART00000003475 Serine/threonine-protein phosphatase with EF-hands 1 (EC 3.1.3.16) (PPEF-1) (Protein phosphatase with EF calcium-binding domain) (PPEF) (Serine/threonine-protein phosphatase 7) (PP7). [Source:Uniprot/SWISSPROT;Acc:O14829]
16.4161 -16.06 0.0000820115 700 4 1 7 [+] picture button
ppt1 ENSDART00000058491 palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:RefSeq_peptide;Acc:NP_998504]
19.4433 -20 0.0000851123 297 9 2 21 [+] picture button
ars2 ENSDART00000018895 arsenate resistance protein 2 [Source:RefSeq_peptide;Acc:NP_775345]
16.2596 -11.77 0.0000940373 229 6 2 8 [+] picture button
zgc:110285 ENSDART00000023797 Alkaline ceramidase 1 (EC 3.5.1.23) (Alkaline CDase-1) (AlkCDase 1) (Acylsphingosine deacylase 3) (N-acylsphingosine amidohydrolase 3). [Source:Uniprot/SWISSPROT;Acc:Q568I2]
16.6463 -14.04 0.000103733 595 9 1 14 [+] picture button
calm2a ENSDART00000014868 Calmodulin (CaM). [Source:Uniprot/SWISSPROT;Acc:Q6PI52]
16.3043 -17.56 0.000110115 650 5 2 6 [+] picture button
ATP6V0A2 (2 of 2) ENSDART00000054119 Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V- ATPase 116 kDa isoform a2) (TJ6). [Source:Uniprot/SWISSPROT;Acc:Q9Y487]
16.8013 -17.21 0.00011356 700 7 2 9 [+] picture button
zgc:92849 ENSDART00000017180 hypothetical protein LOC436767 [Source:RefSeq_peptide;Acc:NP_001002494]
16.2397 -17.59 0.000116448 623 6 1 8 [+] picture button
plaa ENSDART00000062704 phospholipase A2-activating protein [Source:RefSeq_peptide;Acc:NP_997855]
16.2596 -14.44 0.00011866 155 3 2 7 [+] picture button
zgc:112043 ENSDART00000007373 Acyl-CoA-binding domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q502L1]
16.2426 -17.05 0.000122352 1630 2 1 2 [+] picture button
zgc:92925 ENSDART00000076815 hypothetical protein LOC447825 [Source:RefSeq_peptide;Acc:NP_001004564]
16.8751 -17.79 0.000123087 499 11 1 17 [+] picture button
XR_029704.1 ENSDART00000049469 similar to janus kinase 3 (LOC561370), mRNA [Source:RefSeq_dna;Acc:XR_029704]
16.2421 -13.4 0.000126464 700 9 3 13 [+] picture button
aaas ENSDART00000004735 achalasia, adrenocortical insufficiency, alacrimia [Source:RefSeq_peptide;Acc:NP_998390]
16.0753 -14.46 0.000131931 700 6 1 6 [+] picture button

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Download table: GFF TXT
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