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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7h

939 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
19.2158 -23.42 0.0000000000000920453 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
16.4009 -21.63 0.000000000000167919 700 6 1 7 [+] picture button
LOC562671 ENSDART00000102363 supercoiling factor CG9148-PB, isoform B [Source:RefSeq_peptide;Acc:NP_477393]supercoiling factor CG9148-PB, isoform B [Source:RefSeq_peptide;Acc:NP_477393] BY ORTHOLOGY TO:CG9148-RA
16.179 -21.36 0.00000000891659 700 8 3 8 [+] picture button
pias4 ENSDART00000009601 protein inhibitor of activated STAT, 4 [Source:RefSeq_peptide;Acc:NP_998568]
16.2179 -17.59 0.0000000595665 700 6 1 6 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
15.8036 -12.86 0.0000000998851 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
17.7347 -25.33 0.000000169327 700 8 7 12 [+] picture button
A2BIH4_DANRE ENSDART00000099848 Novel protein similar to vertebrate zinc finger protein 644 (ZNF644). [Source:Uniprot/SPTREMBL;Acc:A2BIH4]
17.025 -23.38 0.00000027015 700 5 2 8 [+] picture button
gatm ENSDART00000052641 L-arginine:glycine amidinotransferase [Source:RefSeq_peptide;Acc:NP_955825]
16.4923 -17.88 0.000000333573 700 7 1 8 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.3022 -17.2 0.000000352332 700 8 2 8 [+] picture button
prim1 ENSDART00000104647 primase polypeptide 1 [Source:RefSeq_peptide;Acc:NP_958856]
15.9185 -17.92 0.000000560614 255 7 4 9 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
17.2829 -20.62 0.000001 700 8 1 5 [+] picture button
ENSDART00000073410 NOT ANNOTATED
16.0753 -16.93 0.000001 700 6 1 4 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
16.6976 -20.15 0.000001 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
16.905 -19.8 0.000001 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.6976 -20.15 0.000001 700 8 1 8 [+] picture button
vac14 ENSDART00000009767 vac14 homolog [Source:RefSeq_peptide;Acc:NP_001004650]
15.8808 -12.53 0.0000013666 490 6 2 6 [+] picture button
penkl ENSDART00000027102 proenkephalin-like [Source:RefSeq_peptide;Acc:NP_956377]
15.76 -15.41 0.00000146981 523 9 5 16 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
16.7144 -15.27 0.00000148093 286 10 3 19 [+] picture button
NP_001073985.1 ENSDART00000075765 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
17.1535 -18.72 0.00000180212 700 14 2 16 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
15.9603 -18.66 0.00000180558 700 6 1 8 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
16.9418 -16.89 0.00000195969 239 4 1 12 [+] picture button
C4orf8 ENSDART00000053162 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
16.2528 -17.64 0.00000234134 700 5 2 6 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
16.9418 -15.11 0.00000253117 216 4 5 7 [+] picture button
riok3 ENSDART00000098827 RIO kinase 3 [Source:RefSeq_peptide;Acc:NP_001003614]
17.9079 -25.4 0.0000027829 700 6 1 13 [+] picture button
NP_001077297.1 ENSDART00000028854 hypothetical protein LOC559477 [Source:RefSeq_peptide;Acc:NP_001077297]
16.0322 -20.4 0.00000359639 230 7 2 11 [+] picture button
LOC566565 ENSDART00000024604 methionine-tRNA synthetasemethionine-tRNA synthetase BY ORTHOLOGY TO:AAEL003913-RA
16.9306 -20.16 0.00000397864 700 5 1 8 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
18.0017 -22.79 0.00000487626 393 11 4 16 [+] picture button
foxh1 ENSDART00000078021 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Schmalspur protein). [Source:Uniprot/SWISSPROT;Acc:Q9I9E1]
17.4895 -27.45 0.00000545783 1503 2 3 3 [+] picture button
LOC570775 ENSDART00000083743 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18] BY ORTHOLOGY TO:ENSMMUT00000008747
15.7843 -11.8 0.00000576524 700 5 1 6 [+] picture button
LOC572325 ENSDART00000062418 Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9]Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9] BY ORTHOLOGY TO:ENST00000269445
16.1301 -15.75 0.00000789303 700 8 2 11 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
19.0705 -19.38 0.0000090791 497 7 2 8 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
17.9583 -15.19 0.00000989128 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
18.0268 -20.31 0.0000108263 700 7 5 8 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.6237 -21.22 0.0000114874 610 12 11 20 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
17.8229 -17.12 0.000012184 700 2 1 4 [+] picture button
A0PJR6_DANRE ENSDART00000100411 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A0PJR6]
15.8679 -16.29 0.0000144769 700 5 1 7 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
18.6473 -15.58 0.0000168228 246 7 5 11 [+] picture button
zgc:103755 ENSDART00000097611 hypothetical protein LOC449988 [Source:RefSeq_peptide;Acc:NP_001006009]
15.9185 -16 0.000020941 277 7 2 17 [+] picture button
yeats4 ENSDART00000067427 YEATS domain containing 4 [Source:RefSeq_peptide;Acc:NP_001002752]
16.0322 -15.89 0.0000212083 209 4 2 6 [+] picture button
zgc:109979 ENSDART00000046172 hypothetical protein LOC553178 [Source:RefSeq_peptide;Acc:NP_001018135]
16.4329 -25.29 0.0000227733 700 7 2 6 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
16.91 -18.11 0.0000270683 305 12 2 22 [+] picture button
coe2 ENSDART00000014822 Transcription factor COE2. [Source:Uniprot/SWISSPROT;Acc:O93375]
15.9655 -17.05 0.0000301059 756 5 1 7 [+] picture button
zgc:66295 ENSDART00000005899 hypothetical protein LOC393489 [Source:RefSeq_peptide;Acc:NP_956811]
16.2596 -22.32 0.000030881 277 8 2 19 [+] picture button
LOC564926 ENSDART00000081152 centrosomal protein 76 [Source:MarkerSymbol;Acc:MGI:1923401]centrosomal protein 76 [Source:MarkerSymbol;Acc:MGI:1923401] BY ORTHOLOGY TO:ENSMUST00000097542
16.7821 -17.96 0.0000323473 700 6 1 13 [+] picture button
XR_029515.1 ENSDART00000012484 hypothetical protein LOC798974 (LOC798974), mRNA [Source:RefSeq_dna;Acc:XR_029515]
17.9651 -18.06 0.0000356879 700 8 1 11 [+] picture button
zgc:92765 ENSDART00000016864 hypothetical protein LOC436832 [Source:RefSeq_peptide;Acc:NP_001002559]
15.9304 -22.38 0.0000367939 633 5 2 5 [+] picture button
NP_001077298.1 ENSDART00000085304 hypothetical protein LOC559556 [Source:RefSeq_peptide;Acc:NP_001077298]
15.8053 -16.09 0.0000375767 700 8 2 10 [+] picture button
LOC798803 ENSDART00000058537 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555] BY ORTHOLOGY TO:ENSORLT00000003277
15.9716 -17.17 0.0000418713 700 14 6 11 [+] picture button
Q6P6X8_DANRE ENSDART00000042944 Asxl1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P6X8]
17.1147 -19.64 0.0000487137 596 9 1 18 [+] picture button
LOC556921 ENSDART00000092190 ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7). [Source:Uniprot/SWISSPROT;Acc:Q8N4G2]ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7). [Source:Uniprot/SWISSPROT;Acc:Q8N4G2] BY ORTHOLOGY TO:ENSGALT00000015530
17.0341 -17.24 0.0000543878 700 3 1 3 [+] picture button

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Download table: GFF TXT
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