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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-98

646 hits found.


Page 1 of 13
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
19.7844 -19.36 0.000000000000717061 175 8 7 20 [+] picture button
Adamts8_predicted ENSRNOT00000007358 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1] BY ORTHOLOGY TO:ENSCAFT00000015862
16.1983 -17.82 0.00000000450655 700 21 9 32 [+] picture button
Lrig2_predicted ENSRNOT00000027042 Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898]Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898] BY ORTHOLOGY TO:ENSMMUT00000026841
18.7233 -22.66 0.0000000103839 700 17 7 32 [+] picture button
ENSRNOT00000034333 PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436]PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436] BY ORTHOLOGY TO:ENSXETT00000030786
16.6976 -20.22 0.0000000381287 700 20 2 36 [+] picture button
LOC679258 ENSRNOT00000012684 hypothetical protein LOC774026 [Source:RefSeq_peptide;Acc:NP_001070988]hypothetical protein LOC774026 [Source:RefSeq_peptide;Acc:NP_001070988] BY ORTHOLOGY TO:ENSBTAT00000011465
18.6983 -19.68 0.000000175828 700 20 5 42 [+] picture button
Zfyve26_predicted ENSRNOT00000016380 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
17.8977 -18.89 0.000000194638 700 18 4 36 [+] picture button
Usp32_predicted ENSRNOT00000036814 TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809]TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809] BY ORTHOLOGY TO:ENSGACT00000017939
18.2209 -14.31 0.000000591344 700 16 8 23 [+] picture button
Acadvl ENSRNOT00000024973 Very-long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.-) (VLCAD). [Source:Uniprot/SWISSPROT;Acc:P45953]
17.1692 -19.36 0.000000605904 113 5 6 25 [+] picture button
LOC500947 ENSRNOT00000013927 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]
16.4646 -20.65 0.000000757377 1087 7 6 9 [+] picture button
LOC681499 ENSRNOT00000023067 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679] BY ORTHOLOGY TO:ENSPTRT00000023959
16.905 -19.29 0.00000112173 700 18 8 34 [+] picture button
Coro1c_predicted ENSRNOT00000044751 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5] BY ORTHOLOGY TO:ENST00000326495
16.4333 -17.34 0.00000155118 700 18 7 26 [+] picture button
ENSRNOT00000047198 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2] BY ORTHOLOGY TO:ENSXETT00000033413
16.6046 -17.33 0.00000173534 700 17 7 25 [+] picture button
Stxbp5 ENSRNOT00000049699 Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant larvae protein homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q9WU70]
16.8013 -17.7 0.00000187608 700 13 12 23 [+] picture button
Nkd1_predicted ENSRNOT00000019301 naked cuticle homolog 1 [Source:RefSeq_peptide;Acc:NP_149110]naked cuticle homolog 1 [Source:RefSeq_peptide;Acc:NP_149110] BY ORTHOLOGY TO:ENSORLT00000017426
17.5875 -21.62 0.00000191278 452 15 6 32 [+] picture button
Rab11fip4_predicted ENSRNOT00000018986 RAB11 family interacting protein 4 (class II) [Source:MarkerSymbol;Acc:MGI:2442920]RAB11 family interacting protein 4 (class II) [Source:MarkerSymbol;Acc:MGI:2442920] BY ORTHOLOGY TO:ENSMUST00000092864
16.6541 -17.39 0.00000204495 700 24 6 37 [+] picture button
Col4a2_predicted ENSRNOT00000057463 Collagen alpha-2(IV) chain precursor [Contains: Canstatin]. [Source:Uniprot/SWISSPROT;Acc:P08572]Collagen alpha-2(IV) chain precursor [Contains: Canstatin]. [Source:Uniprot/SWISSPROT;Acc:P08572] BY ORTHOLOGY TO:ENSGALT00000027208
17.1124 -22.85 0.00000206067 700 14 5 19 [+] picture button
Rpusd3_predicted ENSRNOT00000012107 RNA pseudouridylate synthase domain containing 3 [Source:RefSeq_peptide;Acc:NP_775930]RNA pseudouridylate synthase domain containing 3 [Source:RefSeq_peptide;Acc:NP_775930] BY ORTHOLOGY TO:SINFRUT00000131306
20.0118 -18.52 0.00000270739 210 11 6 41 [+] picture button
Iqcb1_predicted ENSRNOT00000003223 IQ calmodulin-binding motif containing 1 [Source:MarkerSymbol;Acc:MGI:2443764]IQ calmodulin-binding motif containing 1 [Source:MarkerSymbol;Acc:MGI:2443764] BY ORTHOLOGY TO:ENSMUST00000023535
18.3991 -18.34 0.000002984 323 15 4 39 [+] picture button
Riok3_predicted ENSRNOT00000039377 Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649]Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649] BY ORTHOLOGY TO:ZK632.3.2
18.843 -15.12 0.00000368804 397 18 7 45 [+] picture button
RGD1562119_predicted ENSRNOT00000029868 Coiled-coil domain-containing protein 111. [Source:Uniprot/SWISSPROT;Acc:Q96LW4]Coiled-coil domain-containing protein 111. [Source:Uniprot/SWISSPROT;Acc:Q96LW4] BY ORTHOLOGY TO:ENSXETT00000003206
16.2827 -18.6 0.0000041223 700 19 4 30 [+] picture button
Faslg ENSRNOT00000003998 Tumor necrosis factor ligand superfamily member 6 (Fas antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily member 6, soluble for [Source:Uniprot/SWISSPROT;Acc:P36940]
17.9342 -22.46 0.00000466648 713 19 6 30 [+] picture button
ENSRNOT00000011023 Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427]Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427] BY ORTHOLOGY TO:ENSCAFT00000002971
18.6508 -23.23 0.00000497882 316 18 5 57 [+] picture button
Josd2_predicted ENSRNOT00000026379 Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2]Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2] BY ORTHOLOGY TO:ENSORLT00000014254
16.487 -17.76 0.00000777394 147 7 8 22 [+] picture button
Slc35b1 ENSRNOT00000006179 Solute carrier family 35 member B1 (UDP-galactose transporter-related protein 1) (UGTrel1). [Source:Uniprot/SWISSPROT;Acc:Q6V7K3]
17.0555 -12.86 0.00000839282 235 11 5 33 [+] picture button
Apbb3 ENSRNOT00000024313 Amyloid beta A4 precursor protein-binding family B member 3 (Fe65-like protein 2) (Fe65L2). [Source:Uniprot/SWISSPROT;Acc:O35827]
18.0788 -19.69 0.000010036 218 9 6 25 [+] picture button
RGD1307554_predicted ENSRNOT00000024829 Uncharacterized protein C19orf47 homolog. [Source:Uniprot/SWISSPROT;Acc:A0JPQ7]
17.0087 -15.09 0.0000114337 700 16 5 22 [+] picture button
Nr6a1 ENSRNOT00000018751 Germ cell nuclear factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6EUW0]
16.179 -18.79 0.0000120906 700 18 12 34 [+] picture button
Piga ENSRNOT00000004733 phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Source:RefSeq_peptide;Acc:NP_001025979]phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Source:RefSeq_peptide;Acc:NP_001025979] BY ORTHOLOGY TO:ENSGALT00000026721
16.2827 -14.61 0.0000125651 700 16 6 21 [+] picture button
Scap2 ENSRNOT00000016608 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (SKAP55-HOM). [Source:Uniprot/SWISSPROT;Acc:Q920G0]
16.6504 -15.06 0.0000137361 419 21 3 60 [+] picture button
Cobll1_predicted ENSRNOT00000001606 Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7]Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7] BY ORTHOLOGY TO:ENSMMUT00000013128
16.9303 -21.17 0.0000149098 700 13 5 22 [+] picture button
RGD1560496_predicted ENSRNOT00000009620 Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4]Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4] BY ORTHOLOGY TO:ENSGALT00000018067
18.5865 -23.63 0.0000161493 700 18 5 41 [+] picture button
Slc35d2_predicted ENSRNOT00000036212 UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24]UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24] BY ORTHOLOGY TO:SINFRUT00000160116
17.4683 -20.35 0.000016404 442 16 6 29 [+] picture button
Pbx3_predicted ENSRNOT00000029600 Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3). [Source:Uniprot/SWISSPROT;Acc:P40426]Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3). [Source:Uniprot/SWISSPROT;Acc:P40426] BY ORTHOLOGY TO:ENSMMUT00000019325
16.5061 -21.42 0.0000227123 1151 14 6 23 [+] picture button
RGD1305464 ENSRNOT00000025246 similar to DKFZP434H132 protein (RGD1305464), mRNA [Source:RefSeq_dna;Acc:NM_001025011]
17.3456 -21.81 0.000023066 869 17 5 23 [+] picture button
RGD1307679 ENSRNOT00000009726 ATP/GTP-binding protein [Source:RefSeq_peptide;Acc:NP_001009599]
16.9483 -14.1 0.0000250714 426 20 6 24 [+] picture button
RGD1308694_predicted ENSRNOT00000021487 Uncharacterized protein C1orf161. [Source:Uniprot/SPTREMBL;Acc:Q5TDL7]Uncharacterized protein C1orf161. [Source:Uniprot/SPTREMBL;Acc:Q5TDL7] BY ORTHOLOGY TO:ENSGALT00000024199
17.4235 -20.22 0.0000311731 700 16 5 23 [+] picture button
RGD1309236_predicted ENSRNOT00000018645 zinc finger CCCH-type, antiviral 1-like [Source:MarkerSymbol;Acc:MGI:2443387]zinc finger CCCH-type, antiviral 1-like [Source:MarkerSymbol;Acc:MGI:2443387] BY ORTHOLOGY TO:ENSMUST00000058524
17.5352 -18.73 0.0000326506 495 19 4 33 [+] picture button
Aldh5a1 ENSRNOT00000031384 Succinate semialdehyde dehydrogenase (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P51650]
16.9418 -20.22 0.0000337819 264 13 4 41 [+] picture button
LOC686964 ENSRNOT00000016848 N-arachidonyl glycine receptor (NAGly receptor) (G-protein coupled receptor 18). [Source:Uniprot/SWISSPROT;Acc:A1A5S3]
17.7059 -23.15 0.0000342225 700 13 2 20 [+] picture button
Prss22_predicted ENSRNOT00000060888 Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4]Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4] BY ORTHOLOGY TO:ENSOANT00000006171
18.6473 -16.82 0.0000419627 269 12 6 38 [+] picture button
Cthrc1 ENSRNOT00000006142 Collagen triple helix repeat-containing protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8CG08]
16.466 -12.92 0.0000452593 364 15 5 44 [+] picture button
RGD1566351_predicted ENSRNOT00000035580 Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0]Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0] BY ORTHOLOGY TO:ENSXETT00000003102
18.4199 -18.44 0.0000484965 140 7 4 14 [+] picture button
ATP6_RAT ENSRNOT00000046108 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:P05504]
16.3864 -16.04 0.0000513284 700 11 4 14 [+] picture button
Urkl1_predicted ENSRNOT00000020873 zinc finger protein 512B [Source:MarkerSymbol;Acc:MGI:2685478]zinc finger protein 512B [Source:MarkerSymbol;Acc:MGI:2685478] BY ORTHOLOGY TO:ENSMUST00000000840
16.8013 -19.06 0.0000552891 700 13 2 23 [+] picture button
Soat2 ENSRNOT00000015368 Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2). [Source:Uniprot/SWISSPROT;Acc:Q7TQM4]
18.7469 -20.09 0.0000562682 336 18 4 64 [+] picture button
Fbxl12 ENSRNOT00000027631 F-box and leucine-rich repeat protein 12 [Source:RefSeq_peptide;Acc:NP_001020871]
16.9277 -16.14 0.0000605347 614 13 6 27 [+] picture button
Uhrf2_predicted ENSRNOT00000015406 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4] BY ORTHOLOGY TO:SINFRUT00000155873
16.2528 -16.13 0.0000633744 857 13 8 19 [+] picture button
RGD1304881_predicted ENSRNOT00000008786 CG6325-PA [Source:RefSeq_peptide;Acc:NP_650000]CG6325-PA [Source:RefSeq_peptide;Acc:NP_650000] BY ORTHOLOGY TO:CG6325-RA
16.3781 -13.85 0.0000659931 382 18 8 37 [+] picture button
PGM2_MOUSE ENSRNOT00000002977 Phosphoglucomutase-2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2). [Source:Uniprot/SWISSPROT;Acc:Q7TSV4]
16.6007 -12.44 0.0000675453 89 3 5 12 [+] picture button
Il13 ENSRNOT00000010121 Interleukin-13 precursor (IL-13) (T-cell activation protein P600). [Source:Uniprot/SWISSPROT;Acc:P42203]
17.6182 -22.08 0.0000677355 700 16 7 24 [+] picture button

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Download table: GFF TXT
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