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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-29b-1*

823 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1305045_predicted ENSRNOT00000008364 actin binding protein, putativeactin binding protein, putative BY ORTHOLOGY TO:AAEL011972-RA
18.1788 -12.7 0.000001 302 16 7 46 [+] picture button
Itgb6 ENSRNOT00000011030 Integrin beta-6 precursor. [Source:Uniprot/SWISSPROT;Acc:Q6AYF4]
16.5172 -11.39 0.000001 385 14 7 30 [+] picture button
LOC690919 ENSRNOT00000020332 neuregulin 4 [Source:MarkerSymbol;Acc:MGI:1933833]neuregulin 4 [Source:MarkerSymbol;Acc:MGI:1933833] BY ORTHOLOGY TO:ENSMUST00000080140
18.4715 -18.42 0.000001 700 15 2 25 [+] picture button
OTTMUSG00000007209 ENSRNOT00000060585 predicted gene, OTTMUSG00000007209 [Source:MarkerSymbol;Acc:MGI:3651567]
16.6826 -15.9 0.000001 700 15 1 19 [+] picture button
RGD1311713_predicted ENSRNOT00000027909 sprouty-related, EVH1 domain containing 3 [Source:MarkerSymbol;Acc:MGI:2142186]sprouty-related, EVH1 domain containing 3 [Source:MarkerSymbol;Acc:MGI:2142186] BY ORTHOLOGY TO:ENSMUST00000048923
17.4235 -19.16 0.000001 700 13 6 10 [+] picture button
RGD1560754_predicted ENSRNOT00000017570 IQ motif containing F5 [Source:MarkerSymbol;Acc:MGI:1922720]IQ motif containing F5 [Source:MarkerSymbol;Acc:MGI:1922720] BY ORTHOLOGY TO:ENSMUST00000085113
16.6976 -11.39 0.00000882667 700 13 2 15 [+] picture button
LOC499240 ENSRNOT00000018350 similar to predicted gene ICRFP703B1614Q5.5 (LOC499240), mRNA [Source:RefSeq_dna;Acc:NM_001024287]
17.3198 -19.22 0.0000133923 700 16 2 21 [+] picture button
ENSRNOT00000044406 NOT ANNOTATED
17.1124 -21.76 0.0000196931 700 10 1 12 [+] picture button
Wac ENSRNOT00000025272 WW domain containing adaptor with coiled-coil [Source:MarkerSymbol;Acc:MGI:2387357]
18.6193 -17.01 0.0000201956 312 15 1 31 [+] picture button
Kif20a_predicted ENSRNOT00000033784 kinesin family member 20A [Source:MarkerSymbol;Acc:MGI:1201682]kinesin family member 20A [Source:MarkerSymbol;Acc:MGI:1201682] BY ORTHOLOGY TO:ENSMUST00000003877
17.5103 -11.44 0.0000277039 178 9 6 33 [+] picture button
Pkd1l2 ENSRNOT00000049533 polycystic kidney disease 1 like 2 [Source:MarkerSymbol;Acc:MGI:2664668]
16.7822 -20.07 0.000034329 700 14 1 28 [+] picture button
RGD1308138_predicted ENSRNOT00000060577 zona pellucida-like domain containing 1 [Source:RefSeq_peptide;Acc:NP_778226]zona pellucida-like domain containing 1 [Source:RefSeq_peptide;Acc:NP_778226] BY ORTHOLOGY TO:ENSXETT00000015257
16.6976 -13.67 0.0000424954 700 15 1 19 [+] picture button
Hars2_predicted ENSRNOT00000012510 Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q2T9V8]Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q2T9V8] BY ORTHOLOGY TO:ENSBTAT00000011800
18.8747 -11.3 0.0000470423 170 6 4 13 [+] picture button
V1rb5 ENSRNOT00000023849 Vomeronasal type-1 receptor B5 (Vomeronasal receptor 4) (Pheromone receptor VN4) (M21 pheromone receptor) (mV1R3). [Source:Uniprot/SWISSPROT;Acc:Q5J3L7]
19.557 -14.68 0.0000470423 197 8 1 17 [+] picture button
LOC367042 ENSRNOT00000060753 similar to Activator 1 37 kDa subunit (Replication factor C 37 kDa subunit) (A1 37 kDa subunit) (RF-C 37 kDa subunit) (RFC37) (LOC367042), mRNA [Source:RefSeq_dna;Acc:XR_007047]
16.6976 -17.19 0.0000501571 700 11 1 10 [+] picture button
Pitrm1_predicted ENSRNOT00000022356 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (Pitrilysin metalloproteinase 1). [Source:Uniprot/SWISSPROT;Acc:Q7ZVZ6]Presequence protease, mitochondrial precursor (EC 3.4.24.-) (Pitrilysin metalloproteinase 1). [Source:Uniprot/SWISSPROT;Acc:Q7ZVZ6] BY ORTHOLOGY TO:ENSDART00000056294
16.5483 -17.3 0.0000617836 700 17 4 22 [+] picture button
RGD1564575_predicted ENSRNOT00000049240 transmembrane protein 89 (TMEM89), mRNA [Source:RefSeq_dna;Acc:NM_001008269]transmembrane protein 89 (TMEM89), mRNA [Source:RefSeq_dna;Acc:NM_001008269] BY ORTHOLOGY TO:ENSMMUT00000020620
17.4238 -16.08 0.0000745007 700 13 1 14 [+] picture button
ENSRNOT00000059835 NOT ANNOTATED
16.3921 -12.36 0.0000911356 700 11 1 18 [+] picture button
Q3UW31-2 ENSRNOT00000060448 CK038_MOUSE Isoform 2 of Q3UW31 - Mus musculus (Mouse) [Source:Uniprot/Varsplic;Acc:Q3UW31-2]
17.2161 -13.93 0.0000924163 700 12 1 16 [+] picture button
Q3UW31-2 ENSRNOT00000051123 CK038_MOUSE Isoform 2 of Q3UW31 - Mus musculus (Mouse) [Source:Uniprot/Varsplic;Acc:Q3UW31-2]
17.2161 -13.93 0.0000924163 700 12 1 11 [+] picture button
LOC688362 ENSRNOT00000042460 similar to par-1 CG8201-PO, isoform O (LOC688362), mRNA [Source:RefSeq_dna;Acc:XR_009515]
17.0087 -13.01 0.0000958097 700 15 1 13 [+] picture button
Epb4.1l3 ENSRNOT00000022878 erythrocyte protein band 4.1-like 3 [Source:RefSeq_peptide;Acc:NP_446379]
16.3733 -15.91 0.0000992254 233 11 1 14 [+] picture button
Net1 ENSRNOT00000046789 neuroepithelial cell transforming gene 1 [Source:RefSeq_peptide;Acc:NP_001034112]
16.3541 -19.35 0.000100107 1440 10 3 10 [+] picture button
Prlpm ENSRNOT00000022093 Placental prolactin-like protein M precursor (PRL-like protein M) (PLP-M). [Source:Uniprot/SWISSPROT;Acc:Q9JII3]
17.9651 -10.03 0.000102245 285 14 1 28 [+] picture button
Vgll1 ENSRNOT00000056667 vestigial like 1 homolog (Drosophila) [Source:MarkerSymbol;Acc:MGI:2655768]
16.3349 -16.83 0.000109863 368 14 1 31 [+] picture button
RGD1559502_predicted ENSRNOT00000030462 NOT ANNOTATED
16.7441 -14.01 0.000111558 700 11 1 12 [+] picture button
Tpbpa ENSRNOT00000061427 trophoblast specific protein alpha [Source:RefSeq_peptide;Acc:NP_742070]
18.3789 -14.48 0.00011381 700 11 1 11 [+] picture button
RGD1560796_predicted ENSRNOT00000041453 suppressor of hairy wing homolog 4 (Drosophila) [Source:MarkerSymbol;Acc:MGI:2384583]suppressor of hairy wing homolog 4 (Drosophila) [Source:MarkerSymbol;Acc:MGI:2384583] BY ORTHOLOGY TO:ENSMUST00000098576
18.4607 -19.02 0.00011939 700 11 4 20 [+] picture button
RGD1560745_predicted ENSRNOT00000057830 COMM domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q7Z4G1]COMM domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q7Z4G1] BY ORTHOLOGY TO:SINFRUT00000167485
16.8571 -16.64 0.000131265 733 12 3 18 [+] picture button
LOC679890 ENSRNOT00000039000 G patch domain and KOW motifs-containing protein (G patch domain- containing protein 5) (Protein MOS2 homolog) (Protein T54). [Source:Uniprot/SWISSPROT;Acc:Q92917]G patch domain and KOW motifs-containing protein (G patch domain- containing protein 5) (Protein MOS2 homolog) (Protein T54). [Source:Uniprot/SWISSPROT;Acc:Q92917] BY ORTHOLOGY TO:ENSORLT00000018095
18.843 -20.19 0.00013247 700 12 2 18 [+] picture button
Fgd2_predicted ENSRNOT00000041665 FYVE, RhoGEF and PH domain containing 2 [Source:MarkerSymbol;Acc:MGI:1347084]FYVE, RhoGEF and PH domain containing 2 [Source:MarkerSymbol;Acc:MGI:1347084] BY ORTHOLOGY TO:ENSMUST00000024810
17.1147 -12.38 0.00013338 622 14 2 20 [+] picture button
RGD1560284_predicted ENSRNOT00000010909 sperm acrosome associated 1 [Source:MarkerSymbol;Acc:MGI:1914902]sperm acrosome associated 1 [Source:MarkerSymbol;Acc:MGI:1914902] BY ORTHOLOGY TO:ENSMUST00000029927
16.8281 -12.33 0.000134106 79 3 3 5 [+] picture button
Gyk ENSRNOT00000051249 Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK) (ATP-stimulated glucocorticoid-receptor translocation promoter) (ASTP). [Source:Uniprot/SWISSPROT;Acc:Q63060]
16.3864 -8.91 0.00015398 700 12 1 17 [+] picture button
Tox_predicted ENSRNOT00000014661 Thymus high mobility group box protein TOX. [Source:Uniprot/SWISSPROT;Acc:O94900]Thymus high mobility group box protein TOX. [Source:Uniprot/SWISSPROT;Acc:O94900] BY ORTHOLOGY TO:ENST00000361421
16.213 -10.57 0.00015426 700 17 9 34 [+] picture button
RGD1306410 ENSRNOT00000001365 Similar to CG14980-PB. [Source:Uniprot/SPTREMBL;Acc:Q6AYE1]
16.8281 -14.13 0.000221719 278 14 8 44 [+] picture button
LMO7 ENSRNOT00000032917 LIM domain only protein 7 [Source:RefSeq_peptide;Acc:NP_001001515]
17.718 -17.1 0.000352376 700 20 3 32 [+] picture button
Slfn8 ENSRNOT00000055962 schlafen 8 [Source:RefSeq_peptide;Acc:NP_001013992]
17.631 -15.22 0.000407904 700 13 1 14 [+] picture button
RGD1560481_predicted ENSRNOT00000010846 fusilli CG8205-PB, isoform B [Source:RefSeq_peptide;Acc:NP_725483]fusilli CG8205-PB, isoform B [Source:RefSeq_peptide;Acc:NP_725483] BY ORTHOLOGY TO:CG8205-RD
16.9418 -9.56 0.000479533 279 14 4 37 [+] picture button
RGD1307009 ENSRNOT00000022703 retinoid x receptor interacting protein [Source:RefSeq_peptide;Acc:NP_001013906]
17.5103 -8.76 0.000501868 247 15 6 50 [+] picture button
ENSRNOT00000052135 NOT ANNOTATED
18.9792 -22.51 0.000515531 700 6 1 9 [+] picture button
ENSRNOT00000002766 NOT ANNOTATED
17.5555 -14.88 0.000556118 700 10 1 14 [+] picture button
ENSRNOT00000062058 NOT ANNOTATED
17.5555 -14.88 0.000556118 700 10 1 14 [+] picture button
FAKD3_RAT ENSRNOT00000034410 FAST kinase domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q68FN9]
18.6473 -20.46 0.000578919 214 11 6 37 [+] picture button
Cma1 ENSRNOT00000027895 chymase 1, mast cell [Source:MarkerSymbol;Acc:MGI:96941]
17.4249 -16.9 0.000580943 700 15 4 25 [+] picture button
E430025E21Rik ENSRNOT00000013315 RIKEN cDNA E430025E21 gene [Source:MarkerSymbol;Acc:MGI:2146110]
17.0087 -18.89 0.000590901 700 22 5 31 [+] picture button
RGD1561757_predicted ENSRNOT00000048408 similar to vomeronasal 2, receptor, 1 (LOC688196), mRNA [Source:RefSeq_dna;Acc:XR_009467]
18.0355 -14.8 0.000599723 700 10 1 10 [+] picture button
Chpt1 ENSRNOT00000007305 Cholinephosphotransferase 1 (EC 2.7.8.2) (Diacylglycerol cholinephosphotransferase 1). [Source:Uniprot/SWISSPROT;Acc:Q66H21]
17.8514 -11.58 0.000609792 188 9 6 31 [+] picture button
RGD1560280_predicted ENSRNOT00000031334 ATP/GTP binding protein-like 1 [Source:RefSeq_peptide;Acc:NP_689549]ATP/GTP binding protein-like 1 [Source:RefSeq_peptide;Acc:NP_689549] BY ORTHOLOGY TO:ENST00000389298
17.1124 -16.41 0.00061072 700 17 2 23 [+] picture button
ENSRNOT00000058733 NOT ANNOTATED
17.5986 -11.62 0.00064479 700 11 1 13 [+] picture button
RT1-CE4 ENSRNOT00000047837 RT1 class I, CE4 [Source:RefSeq_peptide;Acc:NP_001008842]
17.4209 -15.73 0.000646614 700 13 1 17 [+] picture button

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Download table: GFF TXT
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