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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-23b

955 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Kcnk3 ENSRNOT00000013107 Potassium channel subfamily K member 3 (Acid-sensitive potassium channel protein TASK-1) (TWIK-related acid-sensitive K(+) channel 1) (Two pore potassium channel KT3.1). [Source:Uniprot/SWISSPROT;Acc:O54912]
16.8679 -13.62 0.0000000403528 726 18 9 31 [+] picture button
LOC683642 ENSRNOT00000013260 RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399]RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399] BY ORTHOLOGY TO:ENSMUST00000052342
15.6989 -12.49 0.0000000477696 700 22 10 40 [+] picture button
RGD1309522 ENSRNOT00000039344 Protein aurora borealis. [Source:Uniprot/SWISSPROT;Acc:Q5M864]
18.7465 -13.08 0.000000232745 215 12 6 27 [+] picture button
LOC685079 ENSRNOT00000030054 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913710]SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913710] BY ORTHOLOGY TO:ENSMUST00000072452
17.9857 -23.59 0.00000035607 700 20 7 36 [+] picture button
Hook2 ENSRNOT00000035987 Hook2 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4FZR1]
17.1695 -20.09 0.000000622359 700 22 6 34 [+] picture button
Ssr2_predicted ENSRNOT00000027123 Translocon-associated protein subunit beta precursor (TRAP-beta) (Signal sequence receptor subunit beta) (SSR-beta) (Glycoprotein 25H) (gp25H). [Source:Uniprot/SWISSPROT;Acc:P23438]Translocon-associated protein subunit beta precursor (TRAP-beta) (Signal sequence receptor subunit beta) (SSR-beta) (Glycoprotein 25H) (gp25H). [Source:Uniprot/SWISSPROT;Acc:P23438] BY ORTHOLOGY TO:ENSCAFT00000026734
16.9869 -16.5 0.000000781037 700 16 6 28 [+] picture button
RGD1307100 ENSRNOT00000023150 CDNA: FLJ21404 fis, clone COL03835. [Source:Uniprot/SPTREMBL;Acc:Q9H742]CDNA: FLJ21404 fis, clone COL03835. [Source:Uniprot/SPTREMBL;Acc:Q9H742] BY ORTHOLOGY TO:ENSGALT00000019352
17.4379 -15.85 0.000000811135 487 17 6 30 [+] picture button
Mrc1_predicted ENSRNOT00000024736 mannose receptor, C type 1 [Source:MarkerSymbol;Acc:MGI:97142]mannose receptor, C type 1 [Source:MarkerSymbol;Acc:MGI:97142] BY ORTHOLOGY TO:ENSMUST00000028045
17.2605 -10.87 0.000000861119 200 9 4 21 [+] picture button
ENSRNOT00000061528 NOT ANNOTATED
16.3617 -15.28 0.000001 700 9 1 3 [+] picture button
RGD1359435 ENSRNOT00000049949 NOT ANNOTATED
16.4659 -14.8 0.000001 700 8 1 6 [+] picture button
ENSRNOT00000044597 NOT ANNOTATED
16.6743 -15.44 0.000001 700 9 1 5 [+] picture button
Erbb2 ENSRNOT00000042851 Receptor tyrosine-protein kinase erbB-2 precursor (EC 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Epidermal growth factor receptor-related protein) (CD340 antigen). [Source:Uniprot/SWISSPROT;Acc:P06494]
17.0912 -21.07 0.000001 700 15 1 15 [+] picture button
Ccm2 ENSRNOT00000010070 cerebral cavernous malformation 2 homolog (human) [Source:MarkerSymbol;Acc:MGI:2384924]
16.595 -15.86 0.00000164785 700 19 7 31 [+] picture button
Tada1l ENSRNOT00000058689 Tada1l protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJQ7]
15.9244 -15.91 0.00000190676 911 12 8 16 [+] picture button
LOC680102 ENSRNOT00000049461 mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430]mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430] BY ORTHOLOGY TO:ENSORLT00000009586
15.976 -13.3 0.00000200968 700 13 7 22 [+] picture button
RGD1309571 ENSRNOT00000044228 similar to RNA-binding protein isoform G3BP-2a (RGD1309571), mRNA [Source:RefSeq_dna;Acc:NM_001013989]
17.7177 -16.57 0.00000203553 139 8 9 23 [+] picture button
Sema6d_predicted ENSRNOT00000046514 Semaphorin-6D precursor. [Source:Uniprot/SWISSPROT;Acc:Q8NFY4]Semaphorin-6D precursor. [Source:Uniprot/SWISSPROT;Acc:Q8NFY4] BY ORTHOLOGY TO:ENSGALT00000007734
16.5741 -18.21 0.00000306096 700 17 6 26 [+] picture button
LOC500591 ENSRNOT00000025106 Calmodulin-binding transcription activator 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y6Y1]Calmodulin-binding transcription activator 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y6Y1] BY ORTHOLOGY TO:ENSXETT00000011010
17.3575 -21.9 0.00000316129 700 18 6 29 [+] picture button
Mcm3ap_predicted ENSRNOT00000001715 80 kDa MCM3-associated protein (GANP protein). [Source:Uniprot/SWISSPROT;Acc:O60318]80 kDa MCM3-associated protein (GANP protein). [Source:Uniprot/SWISSPROT;Acc:O60318] BY ORTHOLOGY TO:ENSOANT00000021397
16.1558 -13.31 0.00000333259 700 13 8 18 [+] picture button
Btbd14a ENSRNOT00000024786 BTB/POZ domain-containing protein 14A. [Source:Uniprot/SWISSPROT;Acc:Q562B4]
15.6072 -9.83 0.00000348028 901 13 6 14 [+] picture button
MGC94183 ENSRNOT00000037457 Coiled-coil domain-containing protein 82. [Source:Uniprot/SWISSPROT;Acc:Q66H73]
16.5755 -16.62 0.00000376877 1209 10 5 11 [+] picture button
4930481F22Rik ENSRNOT00000015375 RIKEN cDNA 4930481F22 gene [Source:MarkerSymbol;Acc:MGI:1922247]
16.0457 -19.95 0.00000387962 700 20 4 35 [+] picture button
Psma1 ENSRNOT00000015946 Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain). [Source:Uniprot/SWISSPROT;Acc:P18420]
15.8406 -10.92 0.00000413637 700 18 6 34 [+] picture button
Rxrg ENSRNOT00000006117 retinoid X receptor gamma [Source:RefSeq_peptide;Acc:NP_113953]
16.4319 -16.69 0.00000556462 344 15 6 45 [+] picture button
Pkp4_predicted ENSRNOT00000059246 Plakophilin-4 (p0071). [Source:Uniprot/SWISSPROT;Acc:Q99569]Plakophilin-4 (p0071). [Source:Uniprot/SWISSPROT;Acc:Q99569] BY ORTHOLOGY TO:ENSMMUT00000016309
16.3091 -12.23 0.0000057902 750 19 9 27 [+] picture button
Fbxo32 ENSRNOT00000056984 F-box only protein 32 (Muscle atrophy F-box protein) (MAFbx) (Atrogin- 1). [Source:Uniprot/SWISSPROT;Acc:Q91Z62]
15.8764 -13.03 0.00000631567 700 14 5 19 [+] picture button
Ggh ENSRNOT00000009758 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). [Source:Uniprot/SWISSPROT;Acc:Q62867]
16.4603 -20.42 0.00000698146 252 12 4 33 [+] picture button
Cck ENSRNOT00000026159 Cholecystokinins precursor (CCK) [Contains: Cholecystokinin 39 (CCK39); Cholecystokinin 33 (CCK33); Cholecystokinin 22 (CCK22); Cholecystokinin 12 (CCK12); Cholecystokinin 8 (CCK8)]. [Source:Uniprot/SWISSPROT;Acc:P01355]
17.1462 -18.12 0.00000716457 244 14 8 47 [+] picture button
Pdzk6_predicted ENSRNOT00000014116 PDZ domain-containing protein 6 (Inturned planar cell polarity effector homolog). [Source:Uniprot/SWISSPROT;Acc:Q9ULD6]PDZ domain-containing protein 6 (Inturned planar cell polarity effector homolog). [Source:Uniprot/SWISSPROT;Acc:Q9ULD6] BY ORTHOLOGY TO:ENSXETT00000048774
17.0912 -14.48 0.00000819843 700 14 5 18 [+] picture button
MGC105508 ENSRNOT00000049831 Vesicle transport protein SFT2A (SFT2 domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q5U3Y5]
16.3629 -10.18 0.0000095326 429 17 4 35 [+] picture button
Hoxd10_predicted ENSRNOT00000002148 Homeobox protein Hox-D10. [Source:Uniprot/SWISSPROT;Acc:A2T7D1]Homeobox protein Hox-D10. [Source:Uniprot/SWISSPROT;Acc:A2T7D1] BY ORTHOLOGY TO:ENSPTRT00000023468
15.7513 -15.39 0.0000113381 726 18 10 32 [+] picture button
Pou4f2 ENSRNOT00000016422 Homeodomain protein BRN3B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91XM3]
15.5284 -18.21 0.0000116563 1724 6 6 6 [+] picture button
RGD1304719 ENSRNOT00000015373 similar to RIKEN cDNA 2810002N01 (RGD1304719), mRNA [Source:RefSeq_dna;Acc:NM_001037769]
16.0031 -12.38 0.0000119317 222 10 4 29 [+] picture button
Gprc5b_predicted ENSRNOT00000021441 hypothetical protein LOC516334 [Source:RefSeq_peptide;Acc:NP_001069209]hypothetical protein LOC516334 [Source:RefSeq_peptide;Acc:NP_001069209] BY ORTHOLOGY TO:ENSBTAT00000026109
15.714 -13.84 0.0000123948 1509 7 8 6 [+] picture button
Mcfd2 ENSRNOT00000020328 Multiple coagulation factor deficiency protein 2 homolog precursor (Neural stem cell-derived neuronal survival protein). [Source:Uniprot/SWISSPROT;Acc:Q8K5B3]
17.7263 -21.55 0.0000145801 1224 8 3 8 [+] picture button
Vrk3 ENSRNOT00000035748 vaccinia related kinase 3 [Source:RefSeq_peptide;Acc:NP_001005561]
17.7177 -17.41 0.0000152566 277 16 5 51 [+] picture button
Eya1 ENSRNOT00000010064 eyes absent 1 homolog (Drosophila) [Source:MarkerSymbol;Acc:MGI:109344]
16.3617 -15.43 0.0000166211 700 19 5 37 [+] picture button
Rad17 ENSRNOT00000024801 RAD17 homolog [Source:RefSeq_peptide;Acc:NP_001019949]
16.7694 -8.29 0.0000171622 492 16 4 23 [+] picture button
Zbtb8os_predicted ENSRNOT00000010941 C43H8.1 [Source:RefSeq_peptide;Acc:NP_492778]C43H8.1 [Source:RefSeq_peptide;Acc:NP_492778] BY ORTHOLOGY TO:C43H8.1.1
15.5304 -20.63 0.0000188061 837 19 2 24 [+] picture button
RGD1560481_predicted ENSRNOT00000010846 fusilli CG8205-PB, isoform B [Source:RefSeq_peptide;Acc:NP_725483]fusilli CG8205-PB, isoform B [Source:RefSeq_peptide;Acc:NP_725483] BY ORTHOLOGY TO:CG8205-RD
16.0031 -10.5 0.000021345 279 14 4 37 [+] picture button
Slc6a14 ENSRNOT00000007967 colonic system B0+ amino acid transporter [Source:RefSeq_peptide;Acc:NP_001032633]
17.1462 -12.85 0.0000233096 98 4 4 8 [+] picture button
Ube2d1_predicted ENSRNOT00000000750 Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin- conjugating enzyme E2-17 kDa 1) (E2(17)KB 1). [Source:Uniprot/SWISSPROT;Acc:P51668]Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin- conjugating enzyme E2-17 kDa 1) (E2(17)KB 1). [Source:Uniprot/SWISSPROT;Acc:P51668] BY ORTHOLOGY TO:ENSMMUT00000027859
16.8424 -14.08 0.000024108 700 14 11 27 [+] picture button
LOC503000 ENSRNOT00000021930 Similar to beta-catenin-interacting protein ICAT. [Source:Uniprot/SPTREMBL;Acc:Q4KM58]
18.0968 -16.29 0.0000249029 700 15 4 24 [+] picture button
Slc6a2 ENSRNOT00000048470 solute carrier family 6 member 2 [Source:RefSeq_peptide;Acc:NP_112633]
16.8033 -20.4 0.0000252814 117 6 4 18 [+] picture button
Setd1b ENSRNOT00000047609 SET domain containing 1B [Source:MarkerSymbol;Acc:MGI:2652820]
16.6743 -13.22 0.0000275352 700 21 4 38 [+] picture button
BC021891 ENSRNOT00000026986 cDNA sequence BC021891 [Source:MarkerSymbol;Acc:MGI:2385307]
16.4943 -14.97 0.0000317536 700 16 3 25 [+] picture button
LOC305913 ENSRNOT00000011684 zinc finger, MYM-type 2 [Source:MarkerSymbol;Acc:MGI:1923257]zinc finger, MYM-type 2 [Source:MarkerSymbol;Acc:MGI:1923257] BY ORTHOLOGY TO:ENSMUST00000022511
16.52 -17.91 0.0000321303 655 22 10 45 [+] picture button
RGD1564130_predicted ENSRNOT00000024465 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2147538]BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2147538] BY ORTHOLOGY TO:ENSMUST00000046374
15.8406 -10.5 0.0000339264 700 21 9 30 [+] picture button
Atp6v1e1 ENSRNOT00000016495 Vacuolar ATP synthase subunit E 1 (EC 3.6.3.14) (V-ATPase subunit E 1) (Vacuolar proton pump subunit E 1). [Source:Uniprot/SWISSPROT;Acc:Q6PCU2]
17.286 -14.45 0.0000368983 444 16 5 36 [+] picture button
LOC683577 ENSRNOT00000061721 Teneurin-1 (Ten-1) (Tenascin-M1) (Ten-m1) (Protein Odd Oz/ten-m homolog 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKZ4]Teneurin-1 (Ten-1) (Tenascin-M1) (Ten-m1) (Protein Odd Oz/ten-m homolog 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKZ4] BY ORTHOLOGY TO:SINFRUT00000128209
16.5362 -14.97 0.0000375393 700 15 9 24 [+] picture button

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Download table: GFF TXT
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