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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-22

1069 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Cav3 ENSRNOT00000007601 Caveolin-3. [Source:Uniprot/SWISSPROT;Acc:P51638]
17.678 -19.32 0.000000183763 764 17 7 24 [+] picture button
Brpf3_predicted ENSRNOT00000042143 Bromodomain and PHD finger-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULD4]Bromodomain and PHD finger-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULD4] BY ORTHOLOGY TO:ENSOANT00000003693
16.179 -19.52 0.00000126983 700 20 6 28 [+] picture button
Erbb3 ENSRNOT00000006796 Receptor tyrosine-protein kinase erbB-3 precursor (EC 2.7.10.1) (c- erbB3). [Source:Uniprot/SWISSPROT;Acc:Q62799]
16.6007 -17.86 0.0000030969 62 2 6 11 [+] picture button
Yars ENSRNOT00000010674 Tyrosyl-tRNA synthetase, cytoplasmic (EC 6.1.1.1) (Tyrosyl--tRNA ligase) (TyrRS). [Source:Uniprot/SWISSPROT;Acc:Q4KM49]
17.7216 -23.32 0.00000344852 705 18 7 27 [+] picture button
LOC368084 ENSRNOT00000044449 Putative methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosome region 22 protein). [Source:Uniprot/SWISSPROT;Acc:O43709]Putative methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosome region 22 protein). [Source:Uniprot/SWISSPROT;Acc:O43709] BY ORTHOLOGY TO:ENST00000265758
17.7118 -19.07 0.00000372954 403 17 3 45 [+] picture button
Ccnb3_predicted ENSRNOT00000003954 G2/mitotic-specific cyclin-B3. [Source:Uniprot/SWISSPROT;Acc:Q8WWL7]G2/mitotic-specific cyclin-B3. [Source:Uniprot/SWISSPROT;Acc:Q8WWL7] BY ORTHOLOGY TO:ENSXETT00000048888
17.6486 -20.99 0.00000462823 700 16 3 24 [+] picture button
Hdac8_predicted ENSRNOT00000004224 histone deacetylasehistone deacetylase BY ORTHOLOGY TO:AAEL004416-RA
17.0705 -17.87 0.0000113237 700 17 2 25 [+] picture button
RGD1307697_predicted ENSRNOT00000007528 hypothetical protein LOC510019 [Source:RefSeq_peptide;Acc:NP_001039512]hypothetical protein LOC510019 [Source:RefSeq_peptide;Acc:NP_001039512] BY ORTHOLOGY TO:ENSBTAT00000040368
16.1032 -16.99 0.0000228783 674 19 10 25 [+] picture button
LOC361473 ENSRNOT00000025398 similar to mitochondrial translational release factor 1-like (LOC361473), mRNA [Source:RefSeq_dna;Acc:NM_001025723]
15.9716 -18.09 0.0000274516 700 11 1 22 [+] picture button
Ap2a1_predicted ENSRNOT00000020304 The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase]The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase] BY ORTHOLOGY TO:T20B5.1.1
16.3733 -18.62 0.0000374862 236 15 7 69 [+] picture button
Wscd2 ENSRNOT00000000895 WSC domain containing 2 [Source:MarkerSymbol;Acc:MGI:2445030]
16.2827 -16.67 0.0000394474 700 19 3 25 [+] picture button
RGD1309644_predicted ENSRNOT00000027232 Kelch-like protein 30. [Source:Uniprot/SWISSPROT;Acc:Q0D2K2]Kelch-like protein 30. [Source:Uniprot/SWISSPROT;Acc:Q0D2K2] BY ORTHOLOGY TO:ENSMMUT00000025998
16.179 -18.21 0.000039659 700 20 3 28 [+] picture button
LOC690654 ENSRNOT00000026458 hypothetical protein LOC503745 [Source:RefSeq_peptide;Acc:NP_001013341]hypothetical protein LOC503745 [Source:RefSeq_peptide;Acc:NP_001013341] BY ORTHOLOGY TO:ENSDART00000018570
16.0753 -18.15 0.0000419998 700 19 4 30 [+] picture button
RGD1311940_predicted ENSRNOT00000013623 Putative transporter C20orf59. [Source:Uniprot/SWISSPROT;Acc:Q9BYT1]Putative transporter C20orf59. [Source:Uniprot/SWISSPROT;Acc:Q9BYT1] BY ORTHOLOGY TO:ENSORLT00000012257
16.9214 -17.51 0.0000428467 362 17 3 46 [+] picture button
Ss18l1 ENSRNOT00000049563 synovial sarcoma translocation gene on chromosome 18-like 1 [Source:RefSeq_peptide;Acc:NP_620273]
19.0829 -29.89 0.0000466174 700 16 5 24 [+] picture button
Arhgap20 ENSRNOT00000035989 Rho GTPase-activating protein 20 (Rho-type GTPase-activating protein 20) (RA and RhoGAP domain-containing protein) (RARhoGAP). [Source:Uniprot/SWISSPROT;Acc:Q6REY9]
16.7144 -16.34 0.0000476737 153 8 3 21 [+] picture button
Pcdh20_predicted ENSRNOT00000017765 Protocadherin-20 precursor (Protocadherin-13). [Source:Uniprot/SWISSPROT;Acc:Q8N6Y1]Protocadherin-20 precursor (Protocadherin-13). [Source:Uniprot/SWISSPROT;Acc:Q8N6Y1] BY ORTHOLOGY TO:ENST00000358674
15.7457 -21.18 0.0000660164 1553 8 3 9 [+] picture button
Slc37a3_predicted ENSRNOT00000011915 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671]solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671] BY ORTHOLOGY TO:SINFRUT00000150830
15.5567 -17.05 0.0000684195 700 23 3 30 [+] picture button
RGD1306939 ENSRNOT00000048298 similar to mKIAA0386 protein (RGD1306939), mRNA [Source:RefSeq_dna;Acc:NM_001014009]
15.8709 -16.73 0.0000755884 700 13 1 18 [+] picture button
Ppm1g ENSRNOT00000031842 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform [Source:RefSeq_peptide;Acc:NP_671742]
16.6976 -22.24 0.0000762415 700 17 9 26 [+] picture button
Odf1 ENSRNOT00000008700 Outer dense fiber protein (Protein RT7) (RTS 5/1). [Source:Uniprot/SWISSPROT;Acc:P21769]
17.2161 -22.03 0.0000777219 700 15 4 18 [+] picture button
ZBT24_RAT ENSRNOT00000000339 Zinc finger and BTB domain-containing protein 24 (Zinc finger protein 450) (Bone morphogenetic protein-induced factor 1). [Source:Uniprot/SWISSPROT;Acc:Q3B725]
15.6572 -21.18 0.0000832867 700 21 5 31 [+] picture button
RGD1305833 ENSRNOT00000004298 Ankyrin repeat and SAM domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q5M9H0]
17.2087 -21.06 0.0000835338 350 19 6 53 [+] picture button
Tada1l ENSRNOT00000058689 Tada1l protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJQ7]
15.7487 -21.6 0.0000839696 911 12 8 16 [+] picture button
RGD1305274_predicted ENSRNOT00000014401 Hcp beta-lactamase-like protein C1orf163. [Source:Uniprot/SWISSPROT;Acc:Q96BR5]Hcp beta-lactamase-like protein C1orf163. [Source:Uniprot/SWISSPROT;Acc:Q96BR5] BY ORTHOLOGY TO:ENSXETT00000017668
18.5336 -25.45 0.0000845914 153 8 3 27 [+] picture button
Ppyr1 ENSRNOT00000027469 Neuropeptide Y receptor type 4 (NPY4-R) (Pancreatic polypeptide receptor 1) (PP1). [Source:Uniprot/SWISSPROT;Acc:Q63447]
15.3493 -16.68 0.0000917705 700 16 4 29 [+] picture button
Plau ENSRNOT00000014273 Urokinase-type plasminogen activator precursor (EC 3.4.21.73) (uPA) (U-plasminogen activator) [Contains: Urokinase-type plasminogen activator long chain A; Urokinase-type plasminogen activator short chain A; Urokinase-type plasminogen activator chain B]. [Source:Uniprot/SWISSPROT;Acc:P29598]
16.1756 -12.27 0.0000938906 378 18 5 37 [+] picture button
RGD1306932 ENSRNOT00000001831 similar to CG9117-PA (RGD1306932), mRNA [Source:RefSeq_dna;Acc:NM_001024996]
19.0703 -21.68 0.0000955211 417 17 2 42 [+] picture button
Msl2l1_predicted ENSRNOT00000039593 Protein male-specific lethal-2. [Source:Uniprot/SWISSPROT;Acc:P50534]Protein male-specific lethal-2. [Source:Uniprot/SWISSPROT;Acc:P50534] BY ORTHOLOGY TO:CG3241-RA
15.543 -20.33 0.000100406 662 14 7 24 [+] picture button
Camk2n2 ENSRNOT00000058131 calcium/calmodulin-dependent protein kinase II inhibitor 2 [Source:RefSeq_peptide;Acc:NP_067710]
17.0087 -22.17 0.000104786 700 16 4 27 [+] picture button
Gm672 ENSRNOT00000024716 gene model 672, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685518]
16.5826 -26.46 0.000112658 588 19 5 30 [+] picture button
Jdp1 ENSRNOT00000004962 Jun dimerization protein 1 [Source:RefSeq_peptide;Acc:NP_068637]
15.453 -16.11 0.00013035 700 22 4 31 [+] picture button
Irf5_predicted ENSRNOT00000010001 Interferon regulatory factor 5 (IRF-5). [Source:Uniprot/SWISSPROT;Acc:Q58DJ0]Interferon regulatory factor 5 (IRF-5). [Source:Uniprot/SWISSPROT;Acc:Q58DJ0] BY ORTHOLOGY TO:ENSBTAT00000006567
17.5679 -24.3 0.000140718 515 17 5 33 [+] picture button
Ncln ENSRNOT00000007110 Nicalin precursor (Nicastrin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q5XIA1]
16.8145 -20.24 0.000145325 1118 14 4 19 [+] picture button
LOC687226 ENSRNOT00000010606 WBP2 N-terminal like [Source:RefSeq_peptide;Acc:NP_689826]WBP2 N-terminal like [Source:RefSeq_peptide;Acc:NP_689826] BY ORTHOLOGY TO:SINFRUT00000147773
15.3493 -18.67 0.000145712 700 12 2 21 [+] picture button
Aip1 ENSRNOT00000039132 AIP1 [Source:RefSeq_peptide;Acc:NP_775140]
17.0555 -14.17 0.000159749 275 13 9 57 [+] picture button
Wdr33_predicted ENSRNOT00000017075 WD repeat protein 33 (WD repeat protein WDC146). [Source:Uniprot/SWISSPROT;Acc:Q9C0J8]WD repeat protein 33 (WD repeat protein WDC146). [Source:Uniprot/SWISSPROT;Acc:Q9C0J8] BY ORTHOLOGY TO:ENSOANT00000014269
16.7545 -21.74 0.000161247 913 9 2 11 [+] picture button
nod3l ENSRNOT00000061185 Uncharacterized protein C6orf154 homolog (NOD3-like protein). [Source:Uniprot/SWISSPROT;Acc:Q587K4]
17.2829 -19.21 0.000161621 243 14 8 41 [+] picture button
LOC689826 ENSRNOT00000047742 RIKEN cDNA A330049M08 gene [Source:MarkerSymbol;Acc:MGI:2444888]RIKEN cDNA A330049M08 gene [Source:MarkerSymbol;Acc:MGI:2444888] BY ORTHOLOGY TO:ENSMUST00000064481
17.5445 -21.46 0.00017316 700 19 3 30 [+] picture button
Pnpla2_predicted ENSRNOT00000025319 Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase). [Source:Uniprot/SWISSPROT;Acc:P0C548]
17.3028 -23.38 0.0001749 667 19 5 31 [+] picture button
St3gal5 ENSRNOT00000050249 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:RefSeq_peptide;Acc:NP_112627]
16.2285 -20.53 0.000177662 962 15 8 21 [+] picture button
CPG2 ENSRNOT00000047472 CPG2 protein [Source:RefSeq_peptide;Acc:NP_001025080]
15.7805 -20.42 0.000192494 3600 2 1 2 [+] picture button
Sfmbt1 ENSRNOT00000022865 Scm-like with four MBT domains protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9JMD2]
16.6145 -14.68 0.000198198 490 17 6 43 [+] picture button
Stx4a ENSRNOT00000026224 Syntaxin-4. [Source:Uniprot/SWISSPROT;Acc:Q08850]
17.7059 -21.79 0.000204325 700 16 5 24 [+] picture button
Inpp5b ENSRNOT00000010885 Inpp5b protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G006]
16.0149 -16.67 0.000210421 682 17 4 22 [+] picture button
RGD1307682 ENSRNOT00000019011 UPF0360 protein C11orf60 homolog. [Source:Uniprot/SWISSPROT;Acc:Q6AXQ9]
18.8747 -20.41 0.000224217 293 17 5 50 [+] picture button
CPG2 ENSRNOT00000026147 CPG2 protein [Source:RefSeq_peptide;Acc:NP_001025080]
18.1959 -19.98 0.000225532 700 10 1 13 [+] picture button
Tnfrsf1a ENSRNOT00000047373 Tumor necrosis factor receptor superfamily member 1A precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55). [Source:Uniprot/SWISSPROT;Acc:P22934]
15.3493 -19.69 0.000227511 700 17 4 27 [+] picture button
Homer3 ENSRNOT00000027428 Homer protein homolog 3 (Homer-3) (VASP/Ena-related gene up-regulated during seizure and LTP 3) (Vesl-3). [Source:Uniprot/SWISSPROT;Acc:Q9Z2X5]
16.179 -19.01 0.000237103 700 20 2 29 [+] picture button
Cpsf5 ENSRNOT00000026340 Cleavage and polyadenylation specificity factor 5 (Nucleoside diphosphate-linked moiety X motif 21) (Nudix motif 21). [Source:Uniprot/SWISSPROT;Acc:Q4KM65]
15.9716 -17.75 0.000246704 700 17 8 25 [+] picture button

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Download table: GFF TXT
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