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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-17

1113 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Dock4 ENSRNOT00000006709 dedicator of cytokinesis 4 [Source:MarkerSymbol;Acc:MGI:1918006]
15.9052 -17.67 0.000000000240123 1845 8 6 13 [+] picture button
Wee1 ENSRNOT00000013362 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase). [Source:Uniprot/SWISSPROT;Acc:Q63802]
16.5527 -19.23 0.00000000130531 1120 17 8 34 [+] picture button
Pde3b ENSRNOT00000015498 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1). [Source:Uniprot/SWISSPROT;Acc:Q63085]
16.5575 -22.17 0.0000000017557 990 8 11 15 [+] picture button
LOC301334 ENSRNOT00000018935 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
16.4145 -21.42 0.00000000363239 700 23 5 44 [+] picture button
Q80YF3_RAT ENSRNOT00000009693 Mixed-lineage kinase 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q80YF3]
20.8162 -27.62 0.00000000462807 207 11 8 44 [+] picture button
Bambi ENSRNOT00000021801 BMP and activin membrane-bound inhibitor homolog precursor (Kinase- deficient TGFbeta superfamily receptor subunit). [Source:Uniprot/SWISSPROT;Acc:Q91XN4]
16.8641 -17.19 0.00000000557026 357 17 14 45 [+] picture button
Arid4b ENSRNOT00000010836 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9JKB5]
16.4364 -18.04 0.0000000275341 700 19 11 38 [+] picture button
RGD1306658 ENSRNOT00000021403 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001014238]
16.0775 -20.37 0.0000000417287 1510 10 5 10 [+] picture button
Rsnl2 ENSRNOT00000011810 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q66HD5]
17.343 -13.02 0.0000000460124 700 18 12 44 [+] picture button
Fgd5_predicted ENSRNOT00000051022 FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6]FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6] BY ORTHOLOGY TO:ENSMODT00000035165
17.6533 -18.22 0.000000073971 700 13 7 22 [+] picture button
2210018M11Rik ENSRNOT00000043788 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]
16.0692 -14.69 0.0000000834539 700 14 7 31 [+] picture button
Tbx3 ENSRNOT00000011552 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:Q7TST9]
16.289 -20.17 0.0000000892872 700 12 5 21 [+] picture button
RGD1560731_predicted ENSRNOT00000001733 Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1]Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1] BY ORTHOLOGY TO:ENSXETT00000046667
16.7242 -22.23 0.00000010361 700 15 4 33 [+] picture button
Fts ENSRNOT00000060865 AKT interacting protein [Source:RefSeq_peptide;Acc:NP_001011926]
16.1956 -16.04 0.000000118496 673 16 9 28 [+] picture button
Nritp ENSRNOT00000023149 Ion transporter protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9QZG1]
16.4842 -15.15 0.000000149012 910 11 8 23 [+] picture button
RGD1306344 ENSRNOT00000055127 similar to Ab1-133 (RGD1306344), mRNA [Source:RefSeq_dna;Acc:NM_001047860]
18.0662 -28.25 0.000000167429 700 23 8 43 [+] picture button
Med6_predicted ENSRNOT00000009483 RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586]RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586] BY ORTHOLOGY TO:ENSXETT00000004723
16.8251 -15.51 0.000000236567 305 14 4 46 [+] picture button
Map3k2 ENSRNOT00000018975 Mitogen activated serine/threonine protein kinase MEKK2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8R4A9]
16.4879 -13.27 0.000000277417 700 17 7 22 [+] picture button
Pou6f1 ENSRNOT00000049998 POU domain, class 6, transcription factor 1 (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein). [Source:Uniprot/SWISSPROT;Acc:P56223]
17.1863 -16.68 0.000000310689 359 17 5 54 [+] picture button
RGD1561632_predicted ENSRNOT00000022563 Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293]Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293] BY ORTHOLOGY TO:ENSMMUT00000020692
16.4145 -20.25 0.000000496806 700 12 5 22 [+] picture button
RGD1564719_predicted ENSRNOT00000033396 Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7]Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7] BY ORTHOLOGY TO:ENST00000254262
17.5315 -24.74 0.000000509418 700 15 5 31 [+] picture button
Rnf6_predicted ENSRNOT00000001282 RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252]RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252] BY ORTHOLOGY TO:ENSPTRT00000010539
18.4404 -15.81 0.000000651374 303 13 8 50 [+] picture button
Zfp367 ENSRNOT00000036287 Zinc finger protein 367. [Source:Uniprot/SWISSPROT;Acc:Q5U2Z0]
15.7466 -20.63 0.00000066397 2290 5 6 7 [+] picture button
RGD1564528_predicted ENSRNOT00000026724 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728] BY ORTHOLOGY TO:ENSXETT00000010187
15.7128 -12.9 0.00000071529 700 18 13 27 [+] picture button
Trpv6 ENSRNOT00000020616 Transient receptor potential cation channel subfamily V member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1). [Source:Uniprot/SWISSPROT;Acc:Q9R186]
17.7787 -22.68 0.000000871854 441 16 6 46 [+] picture button
Tsg101 ENSRNOT00000018194 Tumor susceptibility gene 101 protein. [Source:Uniprot/SWISSPROT;Acc:Q6IRE4]
15.9092 -12.04 0.000000931336 700 15 6 32 [+] picture button
RGD1565551_predicted ENSRNOT00000012513 NOT ANNOTATED
16.208 -24.36 0.000001 700 16 1 6 [+] picture button
2210018M11Rik ENSRNOT00000020882 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]
17.5354 -14.69 0.000001 199 9 1 38 [+] picture button
Gab1_predicted ENSRNOT00000024390 GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480]GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480] BY ORTHOLOGY TO:ENSORLT00000009187
16.0015 -16.17 0.00000107654 700 12 8 17 [+] picture button
Frmd4a_predicted ENSRNOT00000045765 PREDICTED: Gallus gallus hypothetical LOC419035 (LOC419035), mRNA. [Source:RefSeq_dna;Acc:XR_027002]PREDICTED: Gallus gallus hypothetical LOC419035 (LOC419035), mRNA. [Source:RefSeq_dna;Acc:XR_027002] BY ORTHOLOGY TO:ENSGALT00000010765
16.3112 -12.73 0.00000142437 700 17 7 27 [+] picture button
Camk4 ENSRNOT00000009507 Calcium/calmodulin-dependent protein kinase type IV (EC 2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin). [Source:Uniprot/SWISSPROT;Acc:P13234]
18.3358 -20.17 0.00000146142 725 11 6 19 [+] picture button
Usp53_predicted ENSRNOT00000019684 Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8]Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8] BY ORTHOLOGY TO:SINFRUT00000152651
16.1048 -14.74 0.00000166726 700 14 5 21 [+] picture button
Stk17b ENSRNOT00000016856 Serine/threonine-protein kinase 17B (EC 2.7.11.1) (DAP kinase-related apoptosis-inducing protein kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q91XS8]
16.3457 -11.47 0.00000193716 876 17 7 23 [+] picture button
RGD1310969_predicted ENSRNOT00000031672 hypothetical protein LOC566768 [Source:RefSeq_peptide;Acc:NP_001038584]hypothetical protein LOC566768 [Source:RefSeq_peptide;Acc:NP_001038584] BY ORTHOLOGY TO:ENSDART00000103336
17.1371 -19.82 0.00000248328 700 14 8 30 [+] picture button
LOC690286 ENSRNOT00000055664 Hepatic leukemia factor. [Source:Uniprot/SWISSPROT;Acc:Q64709]
16.2579 -14.8 0.00000320475 700 16 7 32 [+] picture button
Tubgcp5_predicted ENSRNOT00000055989 Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8]Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8] BY ORTHOLOGY TO:ENSMMUT00000007789
16.6879 -18.56 0.00000324123 499 20 6 37 [+] picture button
4930424G05Rik ENSRNOT00000022964 RIKEN cDNA 4930424G05 gene [Source:MarkerSymbol;Acc:MGI:1914828]
16.0132 -17.6 0.00000336126 700 17 8 30 [+] picture button
Perq1_predicted ENSRNOT00000001912 PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677]PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677] BY ORTHOLOGY TO:ENSMUST00000031727
16.5331 -16.92 0.00000355901 352 16 6 50 [+] picture button
Bag5 ENSRNOT00000015333 BAG family molecular chaperone regulator 5 (BCL2-associated athanogene 5) (BAG-5). [Source:Uniprot/SWISSPROT;Acc:Q5QJC9]
16.0722 -18.78 0.00000400264 533 15 7 42 [+] picture button
Hsd11b2 ENSRNOT00000023130 Corticosteroid 11-beta-dehydrogenase isozyme 2 (EC 1.1.1.-) (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2) (11-beta-HSD2) (NAD- dependent 11-beta-hydroxysteroid dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P50233]
16.9892 -18.39 0.00000443833 535 20 8 42 [+] picture button
RGD1563421_predicted ENSRNOT00000018634 FYN binding protein [Source:MarkerSymbol;Acc:MGI:1346327]FYN binding protein [Source:MarkerSymbol;Acc:MGI:1346327] BY ORTHOLOGY TO:ENSMUST00000090461
16.6134 -17.87 0.0000052803 700 17 3 34 [+] picture button
Hs3st5_predicted ENSRNOT00000000743 heparan sulphate sulfotransferaseheparan sulphate sulfotransferase BY ORTHOLOGY TO:AAEL001458-RA
16.8274 -13.71 0.0000054489 700 16 9 32 [+] picture button
Polq ENSRNOT00000034841 polymerase (DNA directed), theta [Source:MarkerSymbol;Acc:MGI:2155399]
16.6209 -22.75 0.00000590628 700 22 4 44 [+] picture button
LOC682704 ENSRNOT00000047305 Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02]Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02] BY ORTHOLOGY TO:ENSGACT00000003616
17.2123 -20.39 0.00000595746 700 19 7 46 [+] picture button
Rragd_predicted ENSRNOT00000009730 Ras-related GTP-binding protein D (Rag D). [Source:Uniprot/SWISSPROT;Acc:Q9NQL2]Ras-related GTP-binding protein D (Rag D). [Source:Uniprot/SWISSPROT;Acc:Q9NQL2] BY ORTHOLOGY TO:ENSMODT00000023193
16.6371 -19.87 0.00000606958 700 14 6 28 [+] picture button
LOC683642 ENSRNOT00000013260 RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399]RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399] BY ORTHOLOGY TO:ENSMUST00000052342
16.2766 -17.69 0.00000624434 700 22 10 40 [+] picture button
Dapk2 ENSRNOT00000023372 death-associated kinase 2 [Source:RefSeq_peptide;Acc:NP_001013127]
17.3403 -20.07 0.00000645101 700 15 5 26 [+] picture button
Paf1 ENSRNOT00000026778 Paf1, RNA polymerase II associated factor, homolog [Source:RefSeq_peptide;Acc:NP_001020069]
18.3273 -25.95 0.00000666177 134 8 5 43 [+] picture button
Mmp23 ENSRNOT00000023590 matrix metallopeptidase 23 [Source:MarkerSymbol;Acc:MGI:1347361]
16.7242 -16.2 0.00000674686 700 18 6 30 [+] picture button
RGD1563482_predicted ENSRNOT00000001421 T23B5.4 [Source:RefSeq_peptide;Acc:NP_001023399]T23B5.4 [Source:RefSeq_peptide;Acc:NP_001023399] BY ORTHOLOGY TO:T23B5.4
17.8748 -22.62 0.00000712092 118 6 3 27 [+] picture button

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Download table: GFF TXT
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