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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-10b

866 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Rap2a ENSRNOT00000032395 RAS related protein 2a? [Source:RefSeq_peptide;Acc:NP_446193]
16.1983 -23.22 0.0000000345248 700 12 6 15 [+] picture button
Wnt9a ENSRNOT00000058327 wingless-type MMTV integration site 9A [Source:MarkerSymbol;Acc:MGI:2446084]
15.5567 -18.04 0.000000445552 700 24 4 38 [+] picture button
Pelo ENSRNOT00000032223 pelota homolog [Source:RefSeq_peptide;Acc:NP_001007635]
15.691 -12.81 0.00000544456 166 7 5 30 [+] picture button
Supt16h_predicted ENSRNOT00000016288 FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (hSPT16) (FACT 140 kDa subunit) (FACTp140) (Chromatin-specific transcription elongation factor 140 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B9]FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (hSPT16) (FACT 140 kDa subunit) (FACTp140) (Chromatin-specific transcription elongation factor 140 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B9] BY ORTHOLOGY TO:ENST00000216297
15.5368 -20.06 0.0000144184 1247 14 5 17 [+] picture button
Htatip ENSRNOT00000028110 Histone acetyltransferase HTATIP (EC 2.3.1.48) (EC 2.3.1.-) (60 kDa Tat interactive protein) (Tip60). [Source:Uniprot/SWISSPROT;Acc:Q99MK2]
16.5017 -13.5 0.0000248236 403 20 5 50 [+] picture button
LOC316432 ENSRNOT00000041546 Islet cell autoantigen 1-like protein (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 15 protein homolog) (Ica69-related protein). [Source:Uniprot/SWISSPROT;Acc:Q6RUG5]
15.8679 -13.81 0.0000309942 700 14 2 22 [+] picture button
Imp3_predicted ENSRNOT00000023456 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:MarkerSymbol;Acc:MGI:1916119]IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:MarkerSymbol;Acc:MGI:1916119] BY ORTHOLOGY TO:ENSMUST00000034827
16.6705 -14.05 0.0000321589 326 15 3 47 [+] picture button
B4galt5_predicted ENSRNOT00000011013 Beta-1,4-galactosyltransferase 5 (EC 2.4.1.-) (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 5) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 5) (Beta-1,4-GalT II). [Source:Uniprot/SWISSPROT;Acc:O43286]Beta-1,4-galactosyltransferase 5 (EC 2.4.1.-) (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 5) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 5) (Beta-1,4-GalT II). [Source:Uniprot/SWISSPROT;Acc:O43286] BY ORTHOLOGY TO:ENSPTRT00000025359
15.4051 -24.06 0.0000325035 700 16 4 29 [+] picture button
Hes3 ENSRNOT00000014536 Transcription factor HES-3 (Hairy and enhancer of split 3). [Source:Uniprot/SWISSPROT;Acc:Q04667]
15.9185 -23.22 0.0000415211 160 8 1 20 [+] picture button
Cdadc1 ENSRNOT00000016416 cytidine and dCMP deaminase domain containing 1 [Source:RefSeq_peptide;Acc:NP_001012156]
15.6622 -16.32 0.0000419629 700 22 2 39 [+] picture button
Olr1432_predicted ENSRNOT00000058511 olfactory receptor Olr1432 [Source:RefSeq_peptide;Acc:NP_001000012]
15.7433 -13.16 0.0000493878 700 12 3 23 [+] picture button
N6amt1 ENSRNOT00000002182 N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:MarkerSymbol;Acc:MGI:1915018]
16.0322 -19.7 0.0000499486 255 8 2 23 [+] picture button
Prpf39_predicted ENSRNOT00000006096 Pre-mRNA-processing factor 39 (PRP39 homolog). [Source:Uniprot/SWISSPROT;Acc:Q86UA1]Pre-mRNA-processing factor 39 (PRP39 homolog). [Source:Uniprot/SWISSPROT;Acc:Q86UA1] BY ORTHOLOGY TO:ENSGALT00000020376
15.6357 -16.57 0.0000515943 918 10 1 15 [+] picture button
Ank ENSRNOT00000015561 Progressive ankylosis protein homolog (ANK). [Source:Uniprot/SWISSPROT;Acc:P58366]
15.502 -21.29 0.0000599921 679 18 7 26 [+] picture button
Bcar1 ENSRNOT00000041815 Breast cancer anti-estrogen resistance protein 1 (CRK-associated substrate) (p130cas). [Source:Uniprot/SWISSPROT;Acc:Q63767]
15.3383 -18.36 0.0000617168 392 19 7 58 [+] picture button
RGD1563203_predicted ENSRNOT00000029386 NOT ANNOTATED
16.1015 -17.17 0.0000634257 348 15 1 47 [+] picture button
Pex12 ENSRNOT00000013233 Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome assembly factor 3) (PAF-3). [Source:Uniprot/SWISSPROT;Acc:O88177]
16.0913 -17.2 0.0000690976 946 11 2 13 [+] picture button
Olr1432_predicted ENSRNOT00000003818 olfactory receptor Olr1432 [Source:RefSeq_peptide;Acc:NP_001000012]
15.6031 -13.16 0.000073196 700 8 1 10 [+] picture button
Slc26a6 ENSRNOT00000027762 solute carrier family 26, member 6 [Source:MarkerSymbol;Acc:MGI:2159728]
18.6473 -18.85 0.0000786585 236 11 2 41 [+] picture button
RGD1564904_predicted ENSRNOT00000052079 similar to ring finger and KH domain containing 2 (predicted) (RGD1564904_predicted), mRNA [Source:RefSeq_dna;Acc:XR_008935]
16.1085 -17.5 0.0000824116 966 14 5 20 [+] picture button
Hnrpdl ENSRNOT00000003106 Heterogeneous nuclear ribonucleoprotein D-like (hnRPD-like protein) (hnRNP-DL). [Source:Uniprot/SWISSPROT;Acc:Q3SWU3]
16.0753 -14.99 0.000083312 700 17 5 27 [+] picture button
RGD1306064_predicted ENSRNOT00000016233 family with sequence similarity 116, member A (FAM116A), mRNA [Source:RefSeq_dna;Acc:NM_152678]family with sequence similarity 116, member A (FAM116A), mRNA [Source:RefSeq_dna;Acc:NM_152678] BY ORTHOLOGY TO:ENST00000311128
15.9612 -13.5 0.0000839293 1238 7 2 8 [+] picture button
Armc5 ENSRNOT00000027032 Armadillo repeat-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q5PQP9]
15.691 -14.66 0.0000842533 277 13 5 40 [+] picture button
RGD1307173 ENSRNOT00000015366 family with sequence similarity 118, member B (FAM118B), mRNA [Source:RefSeq_dna;Acc:NM_024556]family with sequence similarity 118, member B (FAM118B), mRNA [Source:RefSeq_dna;Acc:NM_024556] BY ORTHOLOGY TO:ENSGACT00000008672
16.0572 -12.68 0.0000868357 487 20 5 55 [+] picture button
Gemin4 ENSRNOT00000010187 gem (nuclear organelle) associated protein 4 [Source:MarkerSymbol;Acc:MGI:2449313]
15.4785 -21.02 0.0000908257 700 17 2 27 [+] picture button
Endog ENSRNOT00000021531 endonuclease G [Source:RefSeq_peptide;Acc:NP_001030110]
15.4738 -20.37 0.000094237 700 21 5 31 [+] picture button
Cldn10_predicted ENSRNOT00000013634 NOT ANNOTATED
16.2596 -15.39 0.0000992929 220 10 1 22 [+] picture button
Rpl8 ENSRNOT00000005960 60S ribosomal protein L8. [Source:Uniprot/SWISSPROT;Acc:P62919]
16.0753 -17.54 0.00010096 700 16 1 16 [+] picture button
RGD1564361_predicted ENSRNOT00000002853 solute carrier family 35, member A5 [Source:MarkerSymbol;Acc:MGI:1921352]solute carrier family 35, member A5 [Source:MarkerSymbol;Acc:MGI:1921352] BY ORTHOLOGY TO:ENSMUST00000023344
15.7295 -14.46 0.000104317 700 19 2 31 [+] picture button
Arsj ENSRNOT00000055633 arylsulfatase J [Source:RefSeq_peptide;Acc:NP_001041352]
15.3493 -15.71 0.000104909 700 13 4 17 [+] picture button
Foxi1_predicted ENSRNOT00000009058 Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3). [Source:Uniprot/SWISSPROT;Acc:Q12951]Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3). [Source:Uniprot/SWISSPROT;Acc:Q12951] BY ORTHOLOGY TO:ENSMMUT00000019824
16.213 -20.75 0.000105908 700 15 2 20 [+] picture button
Chst8_predicted ENSRNOT00000037700 Carbohydrate sulfotransferase 8 (EC 2.8.2.-) (N-acetylgalactosamine-4- O-sulfotransferase 1) (GalNAc-4-O-sulfotransferase 1) (GalNAc-4-ST1) (GalNAc4ST-1). [Source:Uniprot/SWISSPROT;Acc:Q9H2A9]Carbohydrate sulfotransferase 8 (EC 2.8.2.-) (N-acetylgalactosamine-4- O-sulfotransferase 1) (GalNAc-4-O-sulfotransferase 1) (GalNAc-4-ST1) (GalNAc4ST-1). [Source:Uniprot/SWISSPROT;Acc:Q9H2A9] BY ORTHOLOGY TO:ENSMMUT00000025314
16.3864 -18.65 0.000118626 700 19 4 38 [+] picture button
Rg9mtd3 ENSRNOT00000016720 RNA (guanine-9-) methyltransferase domain containing 3 [Source:RefSeq_peptide;Acc:NP_001013108]
18.0788 -22.53 0.000122753 294 17 5 45 [+] picture button
Ptpn6 ENSRNOT00000019462 Tyrosine-protein phosphatase non-receptor type 6 (EC 3.1.3.48) (Protein-tyrosine phosphatase SHP-1). [Source:Uniprot/SWISSPROT;Acc:P81718]
16.0322 -16.67 0.000125672 206 9 6 25 [+] picture button
Ppil3 ENSRNOT00000018284 Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (CYP10L). [Source:Uniprot/SWISSPROT;Acc:Q812D3]
17.5273 -24.4 0.000140894 700 15 5 23 [+] picture button
B230208H17Rik ENSRNOT00000022855 RIKEN cDNA B230208H17 gene [Source:MarkerSymbol;Acc:MGI:2442633]
15.453 -18.44 0.000147962 700 18 6 31 [+] picture button
LOC690654 ENSRNOT00000026458 hypothetical protein LOC503745 [Source:RefSeq_peptide;Acc:NP_001013341]hypothetical protein LOC503745 [Source:RefSeq_peptide;Acc:NP_001013341] BY ORTHOLOGY TO:ENSDART00000018570
15.9716 -21.31 0.000149019 700 19 4 30 [+] picture button
LOC686318 ENSRNOT00000058091 Serine/threonine-protein kinase Nek5 (EC 2.7.11.1) (NimA-related protein kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q6P3R8]Serine/threonine-protein kinase Nek5 (EC 2.7.11.1) (NimA-related protein kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q6P3R8] BY ORTHOLOGY TO:ENSMMUT00000023214
15.6082 -14.08 0.000150437 700 14 1 21 [+] picture button
Prkrir_predicted ENSRNOT00000021228 52 kDa repressor of the inhibitor of the protein kinase (p58IPK- interacting protein) (58 kDa interferon-induced protein kinase- interacting protein) (P52rIPK) (Death-associated protein 4) (THAP domain-containing protein 0). [Source:Uniprot/SWISSPROT;Acc:O43422]52 kDa repressor of the inhibitor of the protein kinase (p58IPK- interacting protein) (58 kDa interferon-induced protein kinase- interacting protein) (P52rIPK) (Death-associated protein 4) (THAP domain-containing protein 0). [Source:Uniprot/SWISSPROT;Acc:O43422] BY ORTHOLOGY TO:ENSORLT00000006836
15.6977 -14.49 0.000159307 411 14 3 37 [+] picture button
RGD1565522_predicted ENSRNOT00000055999 transmembrane protein 132E [Source:RefSeq_peptide;Acc:NP_997196]transmembrane protein 132E [Source:RefSeq_peptide;Acc:NP_997196] BY ORTHOLOGY TO:ENSMMUT00000018197
15.5956 -19.83 0.000164801 1004 13 6 17 [+] picture button
Pign_predicted ENSRNOT00000020752 Phosphatidylinositol glycan class N (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q06A39]
15.3493 -16.32 0.000167234 700 18 3 32 [+] picture button
Avpi1 ENSRNOT00000019978 Arginine vasopressin-induced protein 1 (AVP-induced protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8VDA6]
15.3499 -16.04 0.000172764 221 13 3 46 [+] picture button
Fgf6 ENSRNOT00000026866 fibroblast growth factor 6 [Source:RefSeq_peptide;Acc:NP_571983]
15.8679 -19.17 0.000177011 700 17 3 23 [+] picture button
Slc25a2_predicted ENSRNOT00000027128 Mitochondrial ornithine transporter 2 (Solute carrier family 25 member 2). [Source:Uniprot/SWISSPROT;Acc:Q9BXI2]Mitochondrial ornithine transporter 2 (Solute carrier family 25 member 2). [Source:Uniprot/SWISSPROT;Acc:Q9BXI2] BY ORTHOLOGY TO:ENSMMUT00000030873
16.766 -22.05 0.000179621 700 10 4 13 [+] picture button
Rtcd1 ENSRNOT00000020149 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_001004227]
15.5773 -14.99 0.000194247 243 15 8 49 [+] picture button
Q8CFM9_RAT ENSRNOT00000020700 Adenylyl cyclase 7 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8CFM9]
16.0322 -12.93 0.00020304 171 9 4 35 [+] picture button
Entpd4_predicted ENSRNOT00000022440 Ectonucleoside triphosphate diphosphohydrolase 4 (EC 3.6.1.6) (NTPDase 4) (Uridine-diphosphatase) (UDPase) (Lysosomal apyrase-like protein of 70 kDa). [Source:Uniprot/SWISSPROT;Acc:Q9Y227]Ectonucleoside triphosphate diphosphohydrolase 4 (EC 3.6.1.6) (NTPDase 4) (Uridine-diphosphatase) (UDPase) (Lysosomal apyrase-like protein of 70 kDa). [Source:Uniprot/SWISSPROT;Acc:Q9Y227] BY ORTHOLOGY TO:ENSMODT00000021339
15.978 -13.68 0.000242181 700 16 5 26 [+] picture button
Hipk2 ENSRNOT00000010384 homeodomain interacting protein kinase 2 [Source:MarkerSymbol;Acc:MGI:1314872]
15.9185 -11.37 0.000248868 234 16 5 46 [+] picture button
RGD1565542_predicted ENSRNOT00000023963 Nucleoplasmin-3. [Source:Uniprot/SWISSPROT;Acc:O75607]Nucleoplasmin-3. [Source:Uniprot/SWISSPROT;Acc:O75607] BY ORTHOLOGY TO:ENSMMUT00000022144
15.8093 -15.48 0.000255039 700 17 5 23 [+] picture button
Ercc2 ENSRNOT00000024246 excision repair cross-complementing rodent repair deficiency, complementation group 2 [Source:MarkerSymbol;Acc:MGI:95413]
16.179 -20.19 0.00026255 700 16 5 25 [+] picture button

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Download table: GFF TXT
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