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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-10a-3p

873 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1561431_predicted ENSRNOT00000008447 Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365]Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365] BY ORTHOLOGY TO:ENSMMUT00000017974
14.9678 -14.99 0.00000000909035 1115 19 8 28 [+] picture button
Tsta3_predicted ENSRNOT00000012306 tissue specific transplantation antigen P35B [Source:MarkerSymbol;Acc:MGI:98857]tissue specific transplantation antigen P35B [Source:MarkerSymbol;Acc:MGI:98857] BY ORTHOLOGY TO:ENSMUST00000023231
15.3499 -5.73 0.000000258982 261 14 5 39 [+] picture button
LOC689054 ENSRNOT00000034485 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17] BY ORTHOLOGY TO:SINFRUT00000134438
15.2397 -20.11 0.000000304575 700 18 6 29 [+] picture button
Cpn1 ENSRNOT00000018221 Carboxypeptidase N catalytic chain precursor (EC 3.4.17.3) (CPN) (Carboxypeptidase N polypeptide 1) (Carboxypeptidase N small subunit). [Source:Uniprot/SWISSPROT;Acc:Q9EQV8]
15.453 -12.63 0.00000752491 700 18 5 29 [+] picture button
RGD1307851 ENSRNOT00000003892 similar to RIKEN cDNA 4933439F11 (RGD1307851), mRNA [Source:RefSeq_dna;Acc:NM_001013861]
16.4085 -17.52 0.00000909456 700 22 6 34 [+] picture button
Vps37b_predicted ENSRNOT00000001445 vacuolar protein sorting 37B [Source:RefSeq_peptide;Acc:NP_078943]vacuolar protein sorting 37B [Source:RefSeq_peptide;Acc:NP_078943] BY ORTHOLOGY TO:SINFRUT00000148201
14.9774 -20.93 0.00000943272 1622 8 3 8 [+] picture button
RGD1564615_predicted ENSRNOT00000045507 similar to mKIAA0241 protein (predicted) (RGD1564615_predicted), mRNA [Source:RefSeq_dna;Acc:XR_007937]
15.2115 -12.29 0.0000132716 325 18 5 57 [+] picture button
Prim2 ENSRNOT00000016828 DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58). [Source:Uniprot/SWISSPROT;Acc:O89044]
16.395 -18.45 0.0000135861 335 17 6 47 [+] picture button
Mtap_predicted ENSRNOT00000029486 methylthioadenosine phosphorylase (predicted) [Source:RefSeq_peptide;Acc:NP_001041332]
16.1213 -17.2 0.0000252213 700 15 1 18 [+] picture button
ENSRNOT00000051343 NOT ANNOTATED
15.5068 -17 0.000037878 700 10 1 17 [+] picture button
Hes3 ENSRNOT00000014536 Transcription factor HES-3 (Hairy and enhancer of split 3). [Source:Uniprot/SWISSPROT;Acc:Q04667]
15.5773 -13.77 0.0000415211 160 8 1 20 [+] picture button
Cdadc1 ENSRNOT00000016416 cytidine and dCMP deaminase domain containing 1 [Source:RefSeq_peptide;Acc:NP_001012156]
15.4534 -12.47 0.0000419629 700 22 2 39 [+] picture button
Pcdh19_predicted ENSRNOT00000042335 Protocadherin-19 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8TAB3]Protocadherin-19 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8TAB3] BY ORTHOLOGY TO:ENSMMUT00000015488
15.7005 -5.06 0.0000441162 385 16 8 39 [+] picture button
Olr1432_predicted ENSRNOT00000058511 olfactory receptor Olr1432 [Source:RefSeq_peptide;Acc:NP_001000012]
16.3772 -13.72 0.0000493878 700 12 3 23 [+] picture button
Glt1d1 ENSRNOT00000001275 glycosyltransferase 1 domain containing 1 [Source:MarkerSymbol;Acc:MGI:2442755]
15.5567 -12.59 0.0000501997 700 17 2 25 [+] picture button
Cbll1_predicted ENSRNOT00000009566 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL013816-RA
15.0561 -8.29 0.0000583143 700 15 7 22 [+] picture button
Nlgn2 ENSRNOT00000020818 Neuroligin-2 precursor. [Source:Uniprot/SWISSPROT;Acc:Q62888]
15.7234 -15.92 0.0000652312 700 18 6 22 [+] picture button
Exdl2_predicted ENSRNOT00000033378 Exonuclease 3'-5' domain-like-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9NVH0]Exonuclease 3'-5' domain-like-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9NVH0] BY ORTHOLOGY TO:ENSOANT00000019961
16.079 -9.83 0.0000665808 375 18 5 43 [+] picture button
Smndc1 ENSRNOT00000020539 survival motor neuron domain containing 1 [Source:RefSeq_peptide;Acc:NP_001030311]
15.1419 -8.92 0.0000668823 700 12 10 18 [+] picture button
Fbxo30 ENSRNOT00000019918 F-box only protein 30. [Source:Uniprot/SWISSPROT;Acc:Q5XI67]
15.3171 -11.46 0.0000691687 814 13 6 21 [+] picture button
Adh4 ENSRNOT00000031437 Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (Alcohol dehydrogenase 2) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (Alcohol dehydrogenase-B2). [Source:Uniprot/SWISSPROT;Acc:P12711]
15.6 -17.52 0.0000705438 700 16 2 43 [+] picture button
RGD1563296_predicted ENSRNOT00000011718 Conserved oligomeric Golgi complex component 5 (13S Golgi transport complex 90 kDa subunit) (GTC-90) (Golgi transport complex 1). [Source:Uniprot/SWISSPROT;Acc:Q9UP83]Conserved oligomeric Golgi complex component 5 (13S Golgi transport complex 90 kDa subunit) (GTC-90) (Golgi transport complex 1). [Source:Uniprot/SWISSPROT;Acc:Q9UP83] BY ORTHOLOGY TO:ENSMMUT00000021609
16.0124 -13.42 0.0000731074 700 16 2 20 [+] picture button
Olr1432_predicted ENSRNOT00000003818 olfactory receptor Olr1432 [Source:RefSeq_peptide;Acc:NP_001000012]
16.2314 -13.72 0.000073196 700 8 1 10 [+] picture button
Pgap1 ENSRNOT00000017967 GPI inositol-deacylase (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q765A7]
15.9136 -14.31 0.0000760375 467 16 3 36 [+] picture button
Rfpl4_predicted ENSRNOT00000021077 ret finger protein-like 4 [Source:MarkerSymbol;Acc:MGI:2149590]ret finger protein-like 4 [Source:MarkerSymbol;Acc:MGI:2149590] BY ORTHOLOGY TO:ENSMUST00000045215
15.5567 -14.1 0.0000765859 700 13 2 13 [+] picture button
Drd1a ENSRNOT00000030893 D(1A) dopamine receptor. [Source:Uniprot/SWISSPROT;Acc:P18901]
16.1095 -24.05 0.0000785365 1624 16 6 14 [+] picture button
ENSRNOT00000043992 NOT ANNOTATED
15.1917 -12.85 0.0000880978 700 11 1 10 [+] picture button
Centd1_predicted ENSRNOT00000003014 Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin homology domain-containing protein 2) (PARX protein). [Source:Uniprot/SWISSPROT;Acc:Q8WZ64]Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin homology domain-containing protein 2) (PARX protein). [Source:Uniprot/SWISSPROT;Acc:Q8WZ64] BY ORTHOLOGY TO:ENSGALT00000023171
16.1983 -18.48 0.0000892694 700 12 3 19 [+] picture button
LOC312299 ENSRNOT00000008149 enhancer of zeste homolog 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:107940]enhancer of zeste homolog 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:107940] BY ORTHOLOGY TO:ENSMUST00000081721
15.8047 -7 0.0000992929 266 15 8 52 [+] picture button
Cldn10_predicted ENSRNOT00000013634 NOT ANNOTATED
17.0555 -12.18 0.0000992929 220 10 1 22 [+] picture button
LOC294762 ENSRNOT00000014944 NOT ANNOTATED
16.6007 -7.83 0.0000992929 274 12 1 33 [+] picture button
RGD1305506_predicted ENSRNOT00000005486 Ubiquitin domain-containing protein 2 (Dendritic cell-derived ubiquitin-like protein) (DC-UbP) (Ubiquitin-like protein SB72). [Source:Uniprot/SWISSPROT;Acc:Q8WUN7]Ubiquitin domain-containing protein 2 (Dendritic cell-derived ubiquitin-like protein) (DC-UbP) (Ubiquitin-like protein SB72). [Source:Uniprot/SWISSPROT;Acc:Q8WUN7] BY ORTHOLOGY TO:ENSGALT00000004443
16.0057 -16.51 0.000100746 416 17 9 39 [+] picture button
RGD1564361_predicted ENSRNOT00000002853 solute carrier family 35, member A5 [Source:MarkerSymbol;Acc:MGI:1921352]solute carrier family 35, member A5 [Source:MarkerSymbol;Acc:MGI:1921352] BY ORTHOLOGY TO:ENSMUST00000023344
15.1045 -14.49 0.000104317 700 19 2 31 [+] picture button
RGD1559876_predicted ENSRNOT00000048355 NOT ANNOTATED
16.352 -9.39 0.000104987 700 12 1 18 [+] picture button
Krt25d ENSRNOT00000015817 keratin 25D [Source:RefSeq_peptide;Acc:NP_001008760]
15.1783 -11.25 0.00011125 700 17 4 21 [+] picture button
LOC687226 ENSRNOT00000010606 WBP2 N-terminal like [Source:RefSeq_peptide;Acc:NP_689826]WBP2 N-terminal like [Source:RefSeq_peptide;Acc:NP_689826] BY ORTHOLOGY TO:SINFRUT00000147773
15.5567 -20.72 0.000139994 700 12 2 21 [+] picture button
Dcp2_predicted ENSRNOT00000015645 DCP2 protein. [Source:Uniprot/SPTREMBL;Acc:Q3ZBQ7]DCP2 protein. [Source:Uniprot/SPTREMBL;Acc:Q3ZBQ7] BY ORTHOLOGY TO:ENSBTAT00000001015
15.9185 -11.68 0.000149123 222 11 8 54 [+] picture button
Rpo1-2 ENSRNOT00000024882 DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA polymerase I subunit 2) (RPA135) (A127). [Source:Uniprot/SWISSPROT;Acc:O54888]
15.5773 -7.72 0.00015739 304 15 2 51 [+] picture button
Prkrir_predicted ENSRNOT00000021228 52 kDa repressor of the inhibitor of the protein kinase (p58IPK- interacting protein) (58 kDa interferon-induced protein kinase- interacting protein) (P52rIPK) (Death-associated protein 4) (THAP domain-containing protein 0). [Source:Uniprot/SWISSPROT;Acc:O43422]52 kDa repressor of the inhibitor of the protein kinase (p58IPK- interacting protein) (58 kDa interferon-induced protein kinase- interacting protein) (P52rIPK) (Death-associated protein 4) (THAP domain-containing protein 0). [Source:Uniprot/SWISSPROT;Acc:O43422] BY ORTHOLOGY TO:ENSORLT00000006836
16.1368 -13.42 0.000159307 411 14 3 37 [+] picture button
Suclg1 ENSRNOT00000007624 Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS- alpha). [Source:Uniprot/SWISSPROT;Acc:P13086]
15.9185 -6.31 0.000193366 187 11 5 34 [+] picture button
IGF1_RAT ENSRNOT00000005949 Insulin-like growth factor I precursor (IGF-I) (Somatomedin). [Source:Uniprot/SWISSPROT;Acc:P08025]
15.4949 -13.91 0.000239803 700 17 6 32 [+] picture button
Mdh2 ENSRNOT00000001958 Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37). [Source:Uniprot/SWISSPROT;Acc:P04636]
15.0088 -8.71 0.000275518 172 6 4 24 [+] picture button
Nfkb1 ENSRNOT00000036838 Nuclear factor NF-kappa-B p105 subunit (DNA-binding factor KBF1) (EBP- 1) [Contains: Nuclear factor NF-kappa-B p50 subunit] (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q63369]
15.5578 -13.84 0.000304256 676 13 5 20 [+] picture button
Npepl1 ENSRNOT00000034915 aminopeptidase-like 1 [Source:MarkerSymbol;Acc:MGI:2448523]
16.1873 -19.49 0.000305225 452 18 8 56 [+] picture button
Rab3c ENSRNOT00000015871 Ras-related protein Rab-3C. [Source:Uniprot/SWISSPROT;Acc:P62824]
17.1692 -11.08 0.000346126 228 13 5 45 [+] picture button
Pdia5 ENSRNOT00000048283 Protein disulfide-isomerase A5 precursor (EC 5.3.4.1). [Source:Uniprot/SWISSPROT;Acc:Q5I0H9]
15.453 -7.21 0.000352194 700 13 11 18 [+] picture button
RGD1566227_predicted ENSRNOT00000011609 similar to RIKEN cDNA 2610101N10 (predicted) (RGD1566227_predicted), mRNA [Source:RefSeq_dna;Acc:XR_007733]
15.6216 -9.04 0.000371055 439 18 10 47 [+] picture button
LOC687236 ENSRNOT00000059824 CDNA FLJ39575 fis, clone SKMUS2002821 (Hypothetical protein FLJ39575). [Source:Uniprot/SPTREMBL;Acc:Q8N8F7]CDNA FLJ39575 fis, clone SKMUS2002821 (Hypothetical protein FLJ39575). [Source:Uniprot/SPTREMBL;Acc:Q8N8F7] BY ORTHOLOGY TO:ENSMMUT00000041913
15.4738 -15.46 0.000376185 700 15 4 23 [+] picture button
LOC680683 ENSRNOT00000061930 Laforin (EC 3.1.3.48) (EC 3.1.3.16) (Lafora PTPase) (LAFPTPase) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q91XQ2]
15.7391 -23.22 0.000378282 700 16 4 30 [+] picture button
Me1 ENSRNOT00000013244 NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (Malic enzyme 1). [Source:Uniprot/SWISSPROT;Acc:P13697]
15.2456 -15.88 0.000401506 700 15 3 21 [+] picture button

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Download table: GFF TXT
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