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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-106b*

657 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Tcfdp2_predicted ENSRNOT00000015015 hypothetical protein LOC506114 [Source:RefSeq_peptide;Acc:NP_001068709]hypothetical protein LOC506114 [Source:RefSeq_peptide;Acc:NP_001068709] BY ORTHOLOGY TO:ENSBTAT00000008169
17.0087 -17.84 0.000030012 700 19 8 33 [+] picture button
LOC679102 ENSRNOT00000016948 BCL2-associated athanogene 2 [Source:RefSeq_peptide;Acc:NP_957294]BCL2-associated athanogene 2 [Source:RefSeq_peptide;Acc:NP_957294] BY ORTHOLOGY TO:ENSDART00000049684
16.1387 -24.05 0.000101175 700 14 4 23 [+] picture button
Nek2 ENSRNOT00000046401 NIMA related kinase 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91XQ1]
16.3687 -22.81 0.000128126 700 9 1 9 [+] picture button
Ifi44 ENSRNOT00000029990 Interferon-induced protein 44 (p44). [Source:Uniprot/SWISSPROT;Acc:Q8TCB0]Interferon-induced protein 44 (p44). [Source:Uniprot/SWISSPROT;Acc:Q8TCB0] BY ORTHOLOGY TO:ENST00000370747
15.9902 -20.26 0.000199442 307 13 3 36 [+] picture button
NP_001012059.1 ENSRNOT00000020230 mucolipin 3 [Source:RefSeq_peptide;Acc:NP_001012059]
16.9418 -17.16 0.000278018 257 14 4 48 [+] picture button
Neurl2_predicted ENSRNOT00000021216 neuralized-like 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:3043305]neuralized-like 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:3043305] BY ORTHOLOGY TO:ENSMUST00000042775
15.8178 -19.57 0.000279324 700 20 3 34 [+] picture button
LOC361014 ENSRNOT00000008289 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (PNGase) (Peptide:N-glycanase) (N-glycanase 1). [Source:Uniprot/SWISSPROT;Acc:Q5XI55]
16.8281 -22.87 0.000342304 180 10 4 42 [+] picture button
RGD1559712_predicted ENSRNOT00000002953 Phosducin-like protein 2. [Source:Uniprot/SWISSPROT;Acc:Q32LN3]Phosducin-like protein 2. [Source:Uniprot/SWISSPROT;Acc:Q32LN3] BY ORTHOLOGY TO:ENSBTAT00000002322
16.905 -22.13 0.000352976 700 16 4 25 [+] picture button
Kcna2 ENSRNOT00000050149 Potassium voltage-gated channel subfamily A member 2 (Voltage-gated potassium channel subunit Kv1.2) (RBK2) (RCK5) (RAK). [Source:Uniprot/SWISSPROT;Acc:P63142]
18.5336 -24.97 0.000374507 243 13 8 41 [+] picture button
Evl ENSRNOT00000032757 Ena/VASP-like protein (Ena/vasodilator-stimulated phosphoprotein- like). [Source:Uniprot/SWISSPROT;Acc:O08719]
18.2006 -26.85 0.000391547 439 17 4 31 [+] picture button
RGD1308881_predicted ENSRNOT00000025590 GH3 domain-containing protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N2G8]GH3 domain-containing protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N2G8] BY ORTHOLOGY TO:ENSMMUT00000008986
15.8263 -17.88 0.000470046 700 13 2 23 [+] picture button
Psmb9 ENSRNOT00000000532 Proteasome subunit beta type 9 precursor (EC 3.4.25.1) (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2). [Source:Uniprot/SWISSPROT;Acc:P28077]
18.3062 -20.17 0.000479215 182 8 5 28 [+] picture button
Nr2c2 ENSRNOT00000014353 Orphan nuclear receptor TR4. [Source:Uniprot/SWISSPROT;Acc:P55094]
17.525 -24.43 0.000540194 453 15 5 48 [+] picture button
ENSRNOT00000040370 Homolog of Homo sapiens "Zinc finger protein 339 [Source:IPI;Acc:IPI00305086]"Homolog of Homo sapiens "Zinc finger protein 339 [Source:IPI;Acc:IPI00305086]" BY ORTHOLOGY TO:SINFRUT00000143124
17.0087 -35.38 0.000564546 700 16 6 28 [+] picture button
RGD1305157_predicted ENSRNOT00000014323 Uncharacterized protein C3orf41 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UFP1]Uncharacterized protein C3orf41 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UFP1] BY ORTHOLOGY TO:ENSCAFT00000008652
16.9736 -22.63 0.000619424 332 18 3 55 [+] picture button
Gpr120_predicted ENSRNOT00000034563 G-protein coupled receptor 120. [Source:Uniprot/SWISSPROT;Acc:Q2AC31]
18.8747 -19.8 0.000727044 258 12 4 35 [+] picture button
Sh3gl3 ENSRNOT00000026870 SH3-containing GRB2-like protein 3 (Endophilin-3) (Endophilin-A3) (SH3 domain protein 2C) (SH3p13) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O35180]
16.6976 -24.96 0.000747793 700 13 6 25 [+] picture button
Ky_predicted ENSRNOT00000035723 kyphoscoliosis peptidase [Source:RefSeq_peptide;Acc:NP_848649]kyphoscoliosis peptidase [Source:RefSeq_peptide;Acc:NP_848649] BY ORTHOLOGY TO:ENSBTAT00000043993
17.0555 -24.13 0.000759597 282 16 5 51 [+] picture button
LOC498664 ENSRNOT00000041223 Uncharacterized protein C13orf16. [Source:Uniprot/SWISSPROT;Acc:Q8N6K0]Uncharacterized protein C13orf16. [Source:Uniprot/SWISSPROT;Acc:Q8N6K0] BY ORTHOLOGY TO:ENSMMUT00000018437
16.6299 -23.23 0.000791312 939 9 3 12 [+] picture button
Nme6 ENSRNOT00000028125 Nucleoside diphosphate kinase 6 (EC 2.7.4.6) (NDK 6) (NDP kinase 6) (nm23-R6) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O88426]
16.223 -20.71 0.000835654 306 18 7 51 [+] picture button
Tfb1m ENSRNOT00000022397 Mitochondrial dimethyladenosine transferase 1, mitochondrial precursor (EC 2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1) (Mitochondrial 12S rRNA dimethylase 1) (Mitochondrial transcription factor B1) (mtTFB1). [Source:Uniprot/SWISSPROT;Acc:Q811P6]
17.7122 -31.8 0.000915154 531 14 4 27 [+] picture button
Prim1 ENSRNOT00000045511 DNA primase, p49 subunit [Source:RefSeq_peptide;Acc:NP_001008768]
16.1653 -20.89 0.000927352 700 17 2 22 [+] picture button
RGD1304774 ENSRNOT00000009150 similar to opposite strand transcription unit to Stag3; Gats protein (RGD1304774), mRNA [Source:RefSeq_dna;Acc:NM_001025128]
17.2368 -27.3 0.000934897 461 17 3 32 [+] picture button
RGD1311539_predicted ENSRNOT00000018071 Integrator complex subunit 9 (Int9) (Protein related to CPSF subunits of 74 kDa) (RC-74). [Source:Uniprot/SWISSPROT;Acc:Q9NV88]Integrator complex subunit 9 (Int9) (Protein related to CPSF subunits of 74 kDa) (RC-74). [Source:Uniprot/SWISSPROT;Acc:Q9NV88] BY ORTHOLOGY TO:ENSMMUT00000027716
16.0838 -22.41 0.000956856 374 19 4 46 [+] picture button
Rnf190 ENSRNOT00000009316 Probable E3 ubiquitin-protein ligase RNF190 (EC 6.3.2.-) (RING finger protein 190). [Source:Uniprot/SWISSPROT;Acc:Q5XIV2]
16.6394 -25.72 0.00107905 352 17 5 49 [+] picture button
Dkk1_predicted ENSRNOT00000015771 Dickkopf-related protein 1 precursor (Dkk-1) (Dickkopf-1) (hDkk-1) (SK). [Source:Uniprot/SWISSPROT;Acc:O94907]Dickkopf-related protein 1 precursor (Dkk-1) (Dickkopf-1) (hDkk-1) (SK). [Source:Uniprot/SWISSPROT;Acc:O94907] BY ORTHOLOGY TO:ENSORLT00000007972
16.4468 -18.58 0.00119863 563 16 11 29 [+] picture button
Slc25a12 ENSRNOT00000036728 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 [Source:MarkerSymbol;Acc:MGI:1926080]
16.3389 -27.6 0.00122556 415 13 1 26 [+] picture button
Serpinf1 ENSRNOT00000056370 serine (or cysteine) proteinase inhibitor, clade F, member 1 [Source:RefSeq_peptide;Acc:NP_808788]
16.6363 -19.69 0.00129019 700 14 3 19 [+] picture button
Trim14_predicted ENSRNOT00000011817 tripartite motif-containing 14 [Source:MarkerSymbol;Acc:MGI:1921985]tripartite motif-containing 14 [Source:MarkerSymbol;Acc:MGI:1921985] BY ORTHOLOGY TO:ENSMUST00000046897
17.2093 -22.59 0.00158813 700 14 4 37 [+] picture button
ENSRNOT00000060208 NOT ANNOTATED
15.9603 -29.85 0.00161321 700 14 1 17 [+] picture button
LOC683907 ENSRNOT00000014986 NOT ANNOTATED
19.6468 -33.63 0.00172519 448 19 1 28 [+] picture button
Aspm_predicted ENSRNOT00000016797 Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog). [Source:Uniprot/SWISSPROT;Acc:Q8IZT6]Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog). [Source:Uniprot/SWISSPROT;Acc:Q8IZT6] BY ORTHOLOGY TO:ENSGALT00000003688
17.2829 -18.4 0.00172949 133 5 5 23 [+] picture button
Fdxr ENSRNOT00000004592 NADPH:adrenodoxin oxidoreductase, mitochondrial precursor (EC 1.18.1.2) (Adrenodoxin reductase) (AR) (Ferredoxin reductase) (Ferredoxin--NADP(+) reductase). [Source:Uniprot/SWISSPROT;Acc:P56522]
16.8281 -24.27 0.0017668 280 14 5 51 [+] picture button
Ddx59 ENSRNOT00000060390 Probable ATP-dependent RNA helicase DDX59 (EC 3.6.1.-) (DEAD box protein 59). [Source:Uniprot/SWISSPROT;Acc:Q66HG7]
16.8013 -29.93 0.00176786 700 20 4 28 [+] picture button
ENSRNOT00000057511 NOT ANNOTATED
16.2008 -22.02 0.00182864 700 20 1 27 [+] picture button
Eif4g1 ENSRNOT00000041777 NOT ANNOTATED
19.5646 -33.63 0.00186269 450 19 1 29 [+] picture button
Ddx24 ENSRNOT00000012256 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Source:RefSeq_peptide;Acc:NP_954550]
16.1459 -16.61 0.00189256 213 13 4 40 [+] picture button
Txnrd1 ENSRNOT00000013613 Thioredoxin reductase 1, cytoplasmic (EC 1.8.1.9) (TR) (TR1) (NADPH- dependent thioredoxin reductase). [Source:Uniprot/SWISSPROT;Acc:O89049]
15.8679 -20.46 0.00189857 700 17 5 25 [+] picture button
RGD1566151_predicted ENSRNOT00000034188 Interleukin-20 receptor beta chain precursor (IL-20R-beta) (IL-20R2). [Source:Uniprot/SWISSPROT;Acc:Q6UXL0]Interleukin-20 receptor beta chain precursor (IL-20R-beta) (IL-20R2). [Source:Uniprot/SWISSPROT;Acc:Q6UXL0] BY ORTHOLOGY TO:ENSGALT00000021510
17.3198 -23.35 0.0019296 700 16 4 29 [+] picture button
Gcdh_predicted ENSRNOT00000004570 glutaryl-Coenzyme A dehydrogenase [Source:MarkerSymbol;Acc:MGI:104541]glutaryl-Coenzyme A dehydrogenase [Source:MarkerSymbol;Acc:MGI:104541] BY ORTHOLOGY TO:ENSMUST00000003907
16.2971 -18.86 0.00194553 543 22 7 42 [+] picture button
Adamtsl5_predicted ENSRNOT00000042159 NOT ANNOTATED
16.936 -30.73 0.00195535 1103 12 1 9 [+] picture button
Rab4a ENSRNOT00000049337 Ras-related protein Rab-4A. [Source:Uniprot/SWISSPROT;Acc:P05714]
16.0299 -15.65 0.00202396 635 19 4 25 [+] picture button
Gpc5_predicted ENSRNOT00000057665 Glypican-5 precursor. [Source:Uniprot/SWISSPROT;Acc:P78333]Glypican-5 precursor. [Source:Uniprot/SWISSPROT;Acc:P78333] BY ORTHOLOGY TO:ENSMODT00000011988
16.1031 -18.14 0.00204268 700 15 1 19 [+] picture button
Ube2c_predicted ENSRNOT00000020323 NOT ANNOTATED
15.7101 -23.22 0.0020891 700 13 1 13 [+] picture button
Adamts16_predicted ENSRNOT00000022790 ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16). [Source:Uniprot/SWISSPROT;Acc:Q8TE57]ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16). [Source:Uniprot/SWISSPROT;Acc:Q8TE57] BY ORTHOLOGY TO:ENSMODT00000001894
15.8964 -19.46 0.00216986 700 15 4 23 [+] picture button
RGD1564214_predicted ENSRNOT00000030433 NOT ANNOTATED
16.3864 -23.4 0.00228016 700 7 1 8 [+] picture button
Neurog3 ENSRNOT00000000661 neurogenin 3 [Source:RefSeq_peptide;Acc:NP_067732]
16.0185 -21.94 0.00237453 388 19 4 56 [+] picture button
Atf7ip_predicted ENSRNOT00000055702 Activating transcription factor 7-interacting protein 1 (ATFa- associated modulator) (hAM) (ATF-IP) (ATF-interacting protein) (MBD1- containing chromatin-associated factor 1) (P621). [Source:Uniprot/SWISSPROT;Acc:Q6VMQ6]Activating transcription factor 7-interacting protein 1 (ATFa- associated modulator) (hAM) (ATF-IP) (ATF-interacting protein) (MBD1- containing chromatin-associated factor 1) (P621). [Source:Uniprot/SWISSPROT;Acc:Q6VMQ6] BY ORTHOLOGY TO:ENST00000261168
17.631 -22.3 0.00238018 700 19 7 31 [+] picture button
Lgi1 ENSRNOT00000020411 Leucine-rich glioma-inactivated protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8K4Y5]
19.2262 -23.13 0.00255344 349 15 9 27 [+] picture button
Txndc11_predicted ENSRNOT00000003332 thioredoxin domain containing 11 (predicted) (Txndc11_predicted), mRNA [Source:RefSeq_dna;Acc:XR_009202]
16.3194 -24.31 0.00257273 700 16 8 28 [+] picture button

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Download table: GFF TXT
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