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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-101b

1021 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Atxn1 ENSRNOT00000023140 Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q63540]
17.1482 -19.04 0.00000000000995746 700 18 9 31 [+] picture button
LOC361237 ENSRNOT00000048757 Chromodomain Y-like protein (EC 2.3.1.48) (CDY-like). [Source:Uniprot/SWISSPROT;Acc:Q6AYK9]
16.7513 -16.02 0.00000000204854 700 19 8 22 [+] picture button
Ube2d1_predicted ENSRNOT00000000750 Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin- conjugating enzyme E2-17 kDa 1) (E2(17)KB 1). [Source:Uniprot/SWISSPROT;Acc:P51668]Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin- conjugating enzyme E2-17 kDa 1) (E2(17)KB 1). [Source:Uniprot/SWISSPROT;Acc:P51668] BY ORTHOLOGY TO:ENSMMUT00000027859
16.1101 -15.79 0.0000000136808 700 14 11 27 [+] picture button
Cav3 ENSRNOT00000007601 Caveolin-3. [Source:Uniprot/SWISSPROT;Acc:P51638]
17.9695 -21.54 0.0000000212687 764 17 7 24 [+] picture button
BC039210 ENSRNOT00000018671 cDNA sequence BC039210 [Source:MarkerSymbol;Acc:MGI:3603204]
16.4659 -17.9 0.000000108499 700 24 9 48 [+] picture button
Fga ENSRNOT00000012192 Fibrinogen alpha chain precursor [Contains: Fibrinopeptide A]. [Source:Uniprot/SWISSPROT;Acc:P06399]
16.4188 -14.27 0.000000191997 700 15 7 25 [+] picture button
RGD1560666_predicted ENSRNOT00000029467 WWC family member 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULE0]WWC family member 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULE0] BY ORTHOLOGY TO:ENST00000380861
16.0898 -19.25 0.000000227895 700 19 10 26 [+] picture button
Kcnh7 ENSRNOT00000009920 Potassium voltage-gated channel subfamily H member 7 (Voltage-gated potassium channel subunit Kv11.3) (Ether-a-go-go-related gene potassium channel 3) (Ether-a-go-go-related protein 3) (Eag-related protein 3). [Source:Uniprot/SWISSPROT;Acc:O54852]
16.5701 -13.74 0.000000437172 700 17 11 26 [+] picture button
Gmps ENSRNOT00000057688 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase). [Source:Uniprot/SWISSPROT;Acc:Q4V7C6]
16.4855 -16.31 0.00000186687 700 15 7 27 [+] picture button
Pank3_predicted ENSRNOT00000059780 Pantothenate kinase 3 (EC 2.7.1.33) (Pantothenic acid kinase 3) (hPanK3). [Source:Uniprot/SWISSPROT;Acc:Q9H999]Pantothenate kinase 3 (EC 2.7.1.33) (Pantothenic acid kinase 3) (hPanK3). [Source:Uniprot/SWISSPROT;Acc:Q9H999] BY ORTHOLOGY TO:ENSOANT00000012442
16.6481 -17.63 0.00000207221 851 16 8 25 [+] picture button
Flrt3_predicted ENSRNOT00000006454 Leucine-rich repeat transmembrane protein FLRT3 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NZU0]Leucine-rich repeat transmembrane protein FLRT3 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NZU0] BY ORTHOLOGY TO:ENSPTRT00000024657
17.3557 -15.08 0.00000229369 437 17 10 47 [+] picture button
Ascc3 ENSRNOT00000057016 activating signal cointegrator 1 complex subunit 3 [Source:MarkerSymbol;Acc:MGI:1925237]
15.8406 -13.6 0.00000271681 700 15 7 24 [+] picture button
Ss18l1 ENSRNOT00000049563 synovial sarcoma translocation gene on chromosome 18-like 1 [Source:RefSeq_peptide;Acc:NP_620273]
15.8406 -15.98 0.00000313192 700 16 5 24 [+] picture button
Slc30a7 ENSRNOT00000019172 Slc30a7 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJM8]
16.9522 -19.94 0.00000341329 681 20 8 33 [+] picture button
Gdap1l1_predicted ENSRNOT00000011748 Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1-L1). [Source:Uniprot/SWISSPROT;Acc:Q96MZ0]Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1-L1). [Source:Uniprot/SWISSPROT;Acc:Q96MZ0] BY ORTHOLOGY TO:ENSXETT00000057084
16.4497 -20.4 0.0000035198 798 11 7 14 [+] picture button
Rcn2 ENSRNOT00000021817 Reticulocalbin-2 precursor (Calcium-binding protein ERC-55) (Taipoxin- associated calcium-binding protein 49) (TCBP-49). [Source:Uniprot/SWISSPROT;Acc:Q62703]
16.0509 -18.65 0.00000430215 834 17 9 20 [+] picture button
Stk25 ENSRNOT00000024487 serine/threonine kinase 25 [Source:RefSeq_peptide;Acc:NP_908938]
16.2617 -19.23 0.00000579139 566 14 7 26 [+] picture button
Gli3 ENSRNOT00000019396 Zinc finger transcription factor GLI3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91WY5]
16.056 -19.36 0.0000059389 700 14 10 18 [+] picture button
Mon2 ENSRNOT00000045130 Mon2 protein. [Source:Uniprot/SPTREMBL;Acc:Q3KR70]
16.9869 -13.05 0.00000951354 700 19 11 33 [+] picture button
Dusp1 ENSRNOT00000005383 Dual specificity protein phosphatase 1 (EC 3.1.3.48) (EC 3.1.3.16) (MAP kinase phosphatase 1) (MKP-1) (Protein-tyrosine phosphatase CL100) (Protein-tyrosine phosphatase non-receptor type 16). [Source:Uniprot/SWISSPROT;Acc:Q64623]
16.46 -11.76 0.0000111606 681 16 9 25 [+] picture button
LOC686449 ENSRNOT00000050814 WD repeat protein 74 (NOP seven-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6RFH5]WD repeat protein 74 (NOP seven-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6RFH5] BY ORTHOLOGY TO:ENSORLT00000025257
16.2245 -19.88 0.000011656 631 15 7 28 [+] picture button
Adam12_predicted ENSRNOT00000024974 ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 12) (Meltrin alpha). [Source:Uniprot/SWISSPROT;Acc:O43184]ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 12) (Meltrin alpha). [Source:Uniprot/SWISSPROT;Acc:O43184] BY ORTHOLOGY TO:ENSMODT00000013448
15.7572 -18.67 0.0000130875 416 18 7 51 [+] picture button
Sox9 ENSRNOT00000003511 SRY-box containing gene 9a [Source:RefSeq_peptide;Acc:NP_571718]SRY-box containing gene 9a [Source:RefSeq_peptide;Acc:NP_571718] BY ORTHOLOGY TO:ENSDART00000005676
15.7843 -13.56 0.0000136105 700 16 5 21 [+] picture button
Zfand3 ENSRNOT00000045636 AN1-type zinc finger protein 3 (Testis-expressed sequence 27). [Source:Uniprot/SWISSPROT;Acc:Q5U2M7]
16.9059 -23.21 0.0000136378 1788 8 8 9 [+] picture button
Ube2a ENSRNOT00000061455 ubiquitin-conjugating enzyme E2A, RAD6 homolog [Source:RefSeq_peptide;Acc:NP_001013955]
15.7364 -22.88 0.0000140019 700 14 8 25 [+] picture button
Lrrfip2 ENSRNOT00000056060 Leucine-rich repeat flightless-interacting protein 2 (LRR FLII- interacting protein 2). [Source:Uniprot/SWISSPROT;Acc:Q4V7E8]
17.832 -22.14 0.0000151324 160 8 4 27 [+] picture button
Myst2 ENSRNOT00000031274 Histone acetyltransferase MYST2 (EC 2.3.1.48) (MYST protein 2) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 2) (Histone acetyltransferase binding to ORC1). [Source:Uniprot/SWISSPROT;Acc:Q810T5]
16.1766 -18.79 0.0000155156 1542 9 6 12 [+] picture button
Rnf25 ENSRNOT00000022677 ring finger protein 25 [Source:RefSeq_peptide;Acc:NP_001012004]
17.1462 -13.05 0.0000164999 72 4 6 18 [+] picture button
RGD1561386_predicted ENSRNOT00000011250 Cas-Br-M (murine) ecotropic retroviral transforming sequence [Source:RefSeq_peptide;Acc:NP_001007331]Cas-Br-M (murine) ecotropic retroviral transforming sequence [Source:RefSeq_peptide;Acc:NP_001007331] BY ORTHOLOGY TO:ENSDART00000006085
15.9006 -14.6 0.0000165413 338 13 5 30 [+] picture button
Hnf4g_predicted ENSRNOT00000011890 hepatocyte nuclear factor 4gamma [Source:RefSeq_peptide;Acc:NP_991380]hepatocyte nuclear factor 4gamma [Source:RefSeq_peptide;Acc:NP_991380] BY ORTHOLOGY TO:ENSBTAT00000010892
16.8033 -19.58 0.0000166676 206 10 5 39 [+] picture button
RGD1304982_predicted ENSRNOT00000006924 cDNA sequence BC026585 [Source:MarkerSymbol;Acc:MGI:2448516]cDNA sequence BC026585 [Source:MarkerSymbol;Acc:MGI:2448516] BY ORTHOLOGY TO:ENSMUST00000046743
16.2143 -16.72 0.000020618 496 18 2 41 [+] picture button
Ttbk1_predicted ENSRNOT00000006019 tau tubulin kinase 2 [Source:MarkerSymbol;Acc:MGI:2155779]tau tubulin kinase 2 [Source:MarkerSymbol;Acc:MGI:2155779] BY ORTHOLOGY TO:ENSMUST00000028740
17.0135 -13.29 0.0000211783 457 16 9 33 [+] picture button
Q5BJT5_RAT ENSRNOT00000006574 RGD1307897 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJT5]
15.8406 -21.97 0.0000223014 700 10 4 14 [+] picture button
Cyba ENSRNOT00000058375 cytochrome b-245, alpha polypeptide [Source:MarkerSymbol;Acc:MGI:1316658]
16.7785 -22.32 0.0000239184 700 18 2 29 [+] picture button
Adck1 ENSRNOT00000016962 aarF domain containing kinase 1 [Source:MarkerSymbol;Acc:MGI:1919363]
15.6322 -12.33 0.0000241429 700 25 4 46 [+] picture button
Eya1 ENSRNOT00000010064 eyes absent 1 homolog (Drosophila) [Source:MarkerSymbol;Acc:MGI:109344]
16.4659 -24.23 0.0000259368 700 19 5 37 [+] picture button
Plekhh1 ENSRNOT00000014257 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:MarkerSymbol;Acc:MGI:2144989]
16.2191 -16.04 0.00002664 646 21 4 32 [+] picture button
Ptprd ENSRNOT00000025426 protein tyrosine phosphatase, receptor type, D [Source:MarkerSymbol;Acc:MGI:97812]
16.2829 -18 0.0000280058 367 13 7 43 [+] picture button
Ddx46 ENSRNOT00000029885 Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD box protein 46) (Helicase of 117.4 kDa). [Source:Uniprot/SWISSPROT;Acc:Q62780]
16.346 -13.33 0.0000285408 287 14 5 59 [+] picture button
Ap3s1_predicted ENSRNOT00000005222 MGC89782 protein. [Source:Uniprot/SPTREMBL;Acc:Q6DDC0]MGC89782 protein. [Source:Uniprot/SPTREMBL;Acc:Q6DDC0] BY ORTHOLOGY TO:ENSXETT00000057126
17.2586 -16.21 0.0000288232 558 15 9 26 [+] picture button
Tnks2_predicted ENSRNOT00000039942 Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2]Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2] BY ORTHOLOGY TO:ENSMODT00000008519
16.6743 -18.54 0.0000300579 700 18 9 32 [+] picture button
Dcbld2 ENSRNOT00000002251 Discoidin, CUB and LCCL domain-containing protein 2 precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q91ZV2]
16.4659 -15.06 0.0000312241 700 20 6 34 [+] picture button
LOC312299 ENSRNOT00000008149 enhancer of zeste homolog 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:107940]enhancer of zeste homolog 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:107940] BY ORTHOLOGY TO:ENSMUST00000081721
19.0894 -14.98 0.0000334977 266 15 8 52 [+] picture button
Slc24a4_predicted ENSRNOT00000008886 Sodium/potassium/calcium exchanger 4 precursor (Na(+)/K(+)/Ca(2+)- exchange protein 4) (Solute carrier family 24 member 4). [Source:Uniprot/SWISSPROT;Acc:Q8NFF2]Sodium/potassium/calcium exchanger 4 precursor (Na(+)/K(+)/Ca(2+)- exchange protein 4) (Solute carrier family 24 member 4). [Source:Uniprot/SWISSPROT;Acc:Q8NFF2] BY ORTHOLOGY TO:ENSGACT00000011181
17.1462 -14.48 0.0000359147 246 15 4 46 [+] picture button
LOC498962 ENSRNOT00000020313 CDNA PSEC0197 fis, clone HEMBA1001490, weakly similar to PEROXISOMAL- COENZYME A SYNTHETASE (EC 6.-.-.-). [Source:Uniprot/SPTREMBL;Acc:Q8N2F7]CDNA PSEC0197 fis, clone HEMBA1001490, weakly similar to PEROXISOMAL- COENZYME A SYNTHETASE (EC 6.-.-.-). [Source:Uniprot/SPTREMBL;Acc:Q8N2F7] BY ORTHOLOGY TO:ENSCAFT00000031573
15.7364 -18.67 0.000036502 700 17 2 26 [+] picture button
Hat1 ENSRNOT00000002085 Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48). [Source:Uniprot/SWISSPROT;Acc:Q5M939]
16.4603 -16.88 0.0000401937 179 10 8 33 [+] picture button
Dlgap3 ENSRNOT00000019214 Disks large-associated protein 3 (DAP-3) (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:P97838]
17.6034 -18.88 0.0000403521 67 3 6 9 [+] picture button
Tm2d2 ENSRNOT00000022425 TM2 domain containing 2 [Source:RefSeq_peptide;Acc:NP_001017444]
16.5587 -13.45 0.0000414794 521 18 4 35 [+] picture button
Arhgef1 ENSRNOT00000027379 Rho guanine nucleotide exchange factor 1 (Lbc's second cousin). [Source:Uniprot/SWISSPROT;Acc:Q9Z1I6]
16.2574 -22.42 0.0000485258 700 19 3 21 [+] picture button
Mppe1_predicted ENSRNOT00000025164 hypothetical protein LOC550396 [Source:RefSeq_peptide;Acc:NP_001017701]hypothetical protein LOC550396 [Source:RefSeq_peptide;Acc:NP_001017701] BY ORTHOLOGY TO:ENSDART00000066783
15.8461 -12.65 0.0000499397 665 15 5 20 [+] picture button

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Download table: GFF TXT
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