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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-1*

618 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
Hrbl_predicted ENSRNOT00000059611 NOT ANNOTATED
17.0087 -16.48 0.000001 700 23 1 19 [+] picture button
Hrbl_predicted ENSRNOT00000001902 NOT ANNOTATED
17.0087 -16.48 0.000001 700 25 1 16 [+] picture button
Recc1 ENSRNOT00000003860 VIP-receptor-gene repressor protein. [Source:Uniprot/SPTREMBL;Acc:O88461]
17.3198 -16.78 0.000001 700 16 1 10 [+] picture button
RGD1563072_predicted ENSRNOT00000029395 CDNA FLJ39147 fis, clone OCBBF2000523. [Source:Uniprot/SPTREMBL;Acc:Q8N8N6]CDNA FLJ39147 fis, clone OCBBF2000523. [Source:Uniprot/SPTREMBL;Acc:Q8N8N6] BY ORTHOLOGY TO:ENST00000270815
16.8642 -12.29 0.0000334461 458 19 4 42 [+] picture button
Agbl2_predicted ENSRNOT00000038696 NOT ANNOTATED
17.2673 -20.4 0.0000406786 700 12 1 11 [+] picture button
ENSRNOT00000042436 NOT ANNOTATED
16.4901 -14.2 0.000070975 700 13 1 13 [+] picture button
Mrps18b ENSRNOT00000001058 mitochondrial ribosomal protein S18B [Source:RefSeq_peptide;Acc:NP_997699]
18.1925 -12.38 0.0000950589 266 15 4 55 [+] picture button
ENSRNOT00000043747 NOT ANNOTATED
17.0087 -17.44 0.000112448 700 9 1 5 [+] picture button
Xpot_predicted ENSRNOT00000009645 NOT ANNOTATED
18.0788 -13.4 0.000192879 281 14 1 34 [+] picture button
Usp42_predicted ENSRNOT00000001404 Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15) (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42). [Source:Uniprot/SWISSPROT;Acc:Q9H9J4]Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15) (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42). [Source:Uniprot/SWISSPROT;Acc:Q9H9J4] BY ORTHOLOGY TO:ENSGALT00000005338
17.1124 -20.65 0.000498821 700 16 2 22 [+] picture button
ENSRNOT00000060127 NOT ANNOTATED
17.0087 -15.37 0.000584837 700 17 1 20 [+] picture button
LOC501427 ENSRNOT00000061060 NOT ANNOTATED
17.0524 -13.91 0.000650847 700 17 1 34 [+] picture button
Sgne1 ENSRNOT00000010679 Neuroendocrine protein 7B2 precursor (Secretogranin-5) (Secretogranin V) (Secretory granule endocrine protein I) [Contains: N-terminal peptide; C-terminal peptide]. [Source:Uniprot/SWISSPROT;Acc:P27682]
17.224 -13.32 0.000826144 438 21 6 54 [+] picture button
ENSRNOT00000055592 NOT ANNOTATED
18.2714 -20.45 0.000827311 700 14 1 25 [+] picture button
Olr203_predicted ENSRNOT00000046398 olfactory receptor Olr203 [Source:RefSeq_peptide;Acc:NP_001000191]
16.6618 -19.13 0.000847922 700 7 1 9 [+] picture button
LOC499563 ENSRNOT00000032909 similar to zinc finger protein 458 [Source:RefSeq_peptide;Acc:NP_001019470]
17.117 -17.39 0.000916716 882 12 2 13 [+] picture button
ENSRNOT00000061605 Keratin-associated protein 20-1. [Source:Uniprot/SWISSPROT;Acc:Q3LI63]Keratin-associated protein 20-1. [Source:Uniprot/SWISSPROT;Acc:Q3LI63] BY ORTHOLOGY TO:ENST00000334664
17.0996 -18.5 0.000977081 700 11 1 18 [+] picture button
ENSRNOT00000043295 NOT ANNOTATED
16.8468 -15.13 0.00102849 700 12 1 15 [+] picture button
Agpat4 ENSRNOT00000024213 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC 2.3.1.51) (1- AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O- acyltransferase 4). [Source:Uniprot/SWISSPROT;Acc:Q924S1]
17.6777 -23.85 0.00109755 509 18 5 40 [+] picture button
ENSRNOT00000030593 NOT ANNOTATED
18.6681 -17.96 0.00110056 700 18 1 19 [+] picture button
Mrps18b ENSRNOT00000043359 mitochondrial ribosomal protein S18B [Source:RefSeq_peptide;Acc:NP_997699]
16.5939 -12.38 0.00110056 700 17 1 23 [+] picture button
RGD1565002_predicted ENSRNOT00000007645 Dehydrogenase/reductase SDR family member 7 precursor (EC 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4). [Source:Uniprot/SWISSPROT;Acc:Q9Y394]Dehydrogenase/reductase SDR family member 7 precursor (EC 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4). [Source:Uniprot/SWISSPROT;Acc:Q9Y394] BY ORTHOLOGY TO:SINFRUT00000164652
17.5103 -14.41 0.00110587 216 11 4 36 [+] picture button
ENSRNOT00000046981 NOT ANNOTATED
16.8991 -14.83 0.00111449 700 14 1 18 [+] picture button
Olr479_predicted ENSRNOT00000012872 olfactory receptor Olr479 [Source:RefSeq_peptide;Acc:NP_001000305]
17.4235 -22.8 0.00128747 700 16 1 20 [+] picture button
4930564D02Rik ENSRNOT00000055994 RIKEN cDNA 4930564D02 gene [Source:MarkerSymbol;Acc:MGI:1922519]
16.8736 -17.47 0.00136102 700 17 2 30 [+] picture button
RGD1562720_predicted ENSRNOT00000008473 CDNA FLJ25369 fis, clone TST01830 (Hypothetical protein FLJ25369) (Chromosome 2 open reading frame 51). [Source:Uniprot/SPTREMBL;Acc:Q96LM6]CDNA FLJ25369 fis, clone TST01830 (Hypothetical protein FLJ25369) (Chromosome 2 open reading frame 51). [Source:Uniprot/SPTREMBL;Acc:Q96LM6] BY ORTHOLOGY TO:ENSMMUT00000014739
16.9481 -21.71 0.0014306 700 16 2 34 [+] picture button
LOC363269 ENSRNOT00000034152 similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (LOC363269), mRNA [Source:RefSeq_dna;Acc:NM_001014220]
16.6685 -19.05 0.00159597 560 18 1 26 [+] picture button
NP_001071127.1 ENSRNOT00000016207 mitochondrial ribosomal protein S24 [Source:RefSeq_peptide;Acc:NP_001071127]
20.694 -22.72 0.00177126 277 15 4 40 [+] picture button
ENSRNOT00000057174 NOT ANNOTATED
16.4328 -11.9 0.00192474 700 8 1 11 [+] picture button
Omd ENSRNOT00000020648 Osteomodulin precursor (Osteoadherin) (OSAD) (Keratan sulfate proteoglycan osteomodulin) (KSPG osteomodulin). [Source:Uniprot/SWISSPROT;Acc:Q9Z1S7]
20.5803 -23.7 0.00193542 224 9 2 25 [+] picture button
RGD1562200_predicted ENSRNOT00000030771 Patatin-like phospholipase domain-containing protein 4 (Protein GS2). [Source:Uniprot/SWISSPROT;Acc:P41247]Patatin-like phospholipase domain-containing protein 4 (Protein GS2). [Source:Uniprot/SWISSPROT;Acc:P41247] BY ORTHOLOGY TO:ENSGALT00000026826
17.3752 -20.58 0.00194554 700 18 3 27 [+] picture button
Olr1507_predicted ENSRNOT00000026924 olfactory receptor Olr1507 [Source:RefSeq_peptide;Acc:NP_001000033]
16.9405 -15.49 0.00195293 700 14 2 21 [+] picture button
Xpot_predicted ENSRNOT00000058126 Exportin-T (tRNA exportin) (Exportin(tRNA)). [Source:Uniprot/SWISSPROT;Acc:O43592]Exportin-T (tRNA exportin) (Exportin(tRNA)). [Source:Uniprot/SWISSPROT;Acc:O43592] BY ORTHOLOGY TO:SINFRUT00000147979
16.4901 -13.4 0.00205384 700 18 5 26 [+] picture button
ENSRNOT00000036446 NOT ANNOTATED
17.3198 -16.77 0.00205384 700 8 1 7 [+] picture button
Bfsp1 ENSRNOT00000055608 Filensin (Beaded filament structural protein 1) (Lens fiber cell beaded-filament structural protein CP 94) (CP94) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q02435]
16.3864 -19.99 0.00205384 700 14 1 17 [+] picture button
Olfml2b_predicted ENSRNOT00000004117 olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256]olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256] BY ORTHOLOGY TO:ENST00000294794
16.1835 -13.56 0.00205525 470 17 5 33 [+] picture button
Cntn5 ENSRNOT00000061745 contactin 5 (Cntn5), mRNA [Source:RefSeq_dna;Acc:NM_053746]
16.6975 -14.27 0.00207811 700 15 1 22 [+] picture button
Carf_predicted ENSRNOT00000058397 NOT ANNOTATED
16.1164 -17.86 0.00225552 700 9 1 8 [+] picture button
SPBP_RAT ENSRNOT00000007126 Prostatic spermine-binding protein precursor (SBP). [Source:Uniprot/SWISSPROT;Acc:P08723]
17.1543 -14.44 0.00233354 700 12 1 18 [+] picture button
Arfgap1 ENSRNOT00000013900 ADP-ribosylation factor GTPase-activating protein 1 (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1 GAP) (ARF1-directed GTPase- activating protein) (GAP protein). [Source:Uniprot/SWISSPROT;Acc:Q62848]
16.2913 -19.55 0.00237396 700 16 1 19 [+] picture button
RGD1564437_predicted ENSRNOT00000043382 Forkhead box protein R2 (Forkhead box protein N6). [Source:Uniprot/SWISSPROT;Acc:Q6PJQ5]Forkhead box protein R2 (Forkhead box protein N6). [Source:Uniprot/SWISSPROT;Acc:Q6PJQ5] BY ORTHOLOGY TO:ENST00000339140
16.0753 -14.28 0.00239661 700 14 2 29 [+] picture button
E2f1_predicted ENSRNOT00000022414 Transcription factor E2F1 (E2F-1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O09139]
16.2655 -15.35 0.00246459 700 13 1 17 [+] picture button
RGD1566097_predicted ENSRNOT00000024361 NOT ANNOTATED
20.2392 -19.59 0.00253145 131 6 1 16 [+] picture button
LOC682767 ENSRNOT00000034994 NOT ANNOTATED
16.9418 -11.18 0.00259305 700 12 1 29 [+] picture button
SPBP_RAT ENSRNOT00000007123 Prostatic spermine-binding protein precursor (SBP). [Source:Uniprot/SWISSPROT;Acc:P08723]
17.0504 -14.44 0.00269377 700 12 1 15 [+] picture button
LOC689986 ENSRNOT00000002824 Uncharacterized protein C1orf146. [Source:Uniprot/SPTREMBL;Acc:Q5VVC0]Uncharacterized protein C1orf146. [Source:Uniprot/SPTREMBL;Acc:Q5VVC0] BY ORTHOLOGY TO:ENSMODT00000015089
16.905 -12.3 0.00279445 700 17 2 18 [+] picture button
Spergen2 ENSRNOT00000015907 spermatogenic cell-specific gene 2 [Source:RefSeq_peptide;Acc:NP_941956]
16.905 -16.31 0.00279445 700 14 2 18 [+] picture button
Tnfrsf11a ENSRNOT00000061814 Tnfrsf11a protein. [Source:Uniprot/SPTREMBL;Acc:Q498S6]
16.2579 -15.3 0.00290736 700 12 1 19 [+] picture button
Olr590_predicted ENSRNOT00000050096 olfactory receptor Olr590 [Source:RefSeq_peptide;Acc:NP_001000658]
16.0141 -19.69 0.00306691 700 15 2 16 [+] picture button
Olr590_predicted ENSRNOT00000057437 olfactory receptor Olr590 [Source:RefSeq_peptide;Acc:NP_001000658]
16.0141 -19.69 0.00306691 700 14 1 15 [+] picture button

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Download table: GFF TXT
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