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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7i

1141 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
19.4433 -20.29 0.0000000000000920453 175 8 7 20 [+] picture button
ENSRNOT00000047198 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2] BY ORTHOLOGY TO:ENSXETT00000033413
17.5445 -18.9 0.000000000111674 700 17 7 25 [+] picture button
Adck1 ENSRNOT00000016962 aarF domain containing kinase 1 [Source:MarkerSymbol;Acc:MGI:1919363]
16.6976 -20.09 0.00000000772334 700 25 4 46 [+] picture button
ENSRNOT00000034333 PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436]PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436] BY ORTHOLOGY TO:ENSXETT00000030786
16.3864 -18.05 0.00000002126 700 20 2 36 [+] picture button
Sema4c_predicted ENSRNOT00000021956 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4] BY ORTHOLOGY TO:ENSORLT00000019166
16.4275 -24.22 0.0000000294605 700 26 9 60 [+] picture button
Nr6a1 ENSRNOT00000018751 Germ cell nuclear factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6EUW0]
17.8384 -20.68 0.0000000619932 700 18 12 34 [+] picture button
Myc ENSRNOT00000006188 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P09416]
16.8281 -22.12 0.0000000734567 211 8 13 20 [+] picture button
Hspbp1 ENSRNOT00000024251 Hsp70-binding protein 1 (HspBP1) (Heat shock protein-binding protein 1) (Hsp70-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6IMX7]
16.2596 -14.31 0.000000191164 247 14 5 41 [+] picture button
LOC681499 ENSRNOT00000023067 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679] BY ORTHOLOGY TO:ENSPTRT00000023959
16.905 -23.42 0.000000215448 700 18 8 34 [+] picture button
ENSRNOT00000011023 Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427]Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427] BY ORTHOLOGY TO:ENSCAFT00000002971
17.8596 -22.09 0.000000225526 316 18 5 57 [+] picture button
Zfyve26_predicted ENSRNOT00000016380 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.5449 -21.19 0.000000352332 700 18 4 36 [+] picture button
RGD1564821_predicted ENSRNOT00000006946 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906]N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906] BY ORTHOLOGY TO:ENSMMUT00000017610
16.5686 -14.58 0.000000381097 558 14 8 24 [+] picture button
Lrig2_predicted ENSRNOT00000027042 Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898]Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898] BY ORTHOLOGY TO:ENSMMUT00000026841
17.2589 -20.17 0.000000574124 700 17 7 32 [+] picture button
Acvr1b ENSRNOT00000009345 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2). [Source:Uniprot/SWISSPROT;Acc:P80202]
16.8617 -18.49 0.000000822493 745 18 7 30 [+] picture button
Slc35d2_predicted ENSRNOT00000036212 UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24]UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24] BY ORTHOLOGY TO:SINFRUT00000160116
18.0141 -18.53 0.000000858875 442 16 6 29 [+] picture button
Apbb3 ENSRNOT00000024313 Amyloid beta A4 precursor protein-binding family B member 3 (Fe65-like protein 2) (Fe65L2). [Source:Uniprot/SWISSPROT;Acc:O35827]
17.1692 -18.43 0.000000916424 218 9 6 25 [+] picture button
LOC257650 ENSRNOT00000038939 hippyragranin [Source:RefSeq_peptide;Acc:NP_671483]
16.4301 -22.4 0.000001 700 13 1 16 [+] picture button
RGD1560496_predicted ENSRNOT00000009620 Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4]Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4] BY ORTHOLOGY TO:ENSGALT00000018067
16.6137 -17.02 0.00000116427 700 18 5 41 [+] picture button
PENK_RAT ENSRNOT00000011892 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P04094]
17.9855 -20.96 0.00000146981 314 18 8 53 [+] picture button
RGD1560408_predicted ENSRNOT00000024701 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346] BY ORTHOLOGY TO:ENSXETT00000042031
17.2032 -16.72 0.00000154834 372 15 8 39 [+] picture button
Pld3 ENSRNOT00000057177 Phospholipase D3 (EC 3.1.4.4) (PLD 3) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3). [Source:Uniprot/SWISSPROT;Acc:Q5FVH2]
16.6892 -15.54 0.00000160093 304 17 7 46 [+] picture button
Acadvl ENSRNOT00000024973 Very-long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.-) (VLCAD). [Source:Uniprot/SWISSPROT;Acc:P45953]
16.2596 -19.27 0.00000195969 113 5 6 25 [+] picture button
RGD1563619_predicted ENSRNOT00000013880 Carboxypeptidase A4 precursor (EC 3.4.17.-) (Carboxypeptidase A3). [Source:Uniprot/SWISSPROT;Acc:Q9UI42]Carboxypeptidase A4 precursor (EC 3.4.17.-) (Carboxypeptidase A3). [Source:Uniprot/SWISSPROT;Acc:Q9UI42] BY ORTHOLOGY TO:ENSMODT00000018511
16.6127 -20.85 0.0000019601 700 16 3 28 [+] picture button
Q4G022_RAT ENSRNOT00000005122 Asna1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G022]
16.2596 -16.98 0.00000209836 310 15 8 65 [+] picture button
Ngfb ENSRNOT00000022200 Beta-nerve growth factor precursor (Beta-NGF). [Source:Uniprot/SWISSPROT;Acc:P25427]
16.487 -14.62 0.00000246281 152 9 9 22 [+] picture button
Gpr156 ENSRNOT00000003773 Probable G-protein coupled receptor 156 (GABAB-related G-protein coupled receptor). [Source:Uniprot/SWISSPROT;Acc:Q8K451]
16.8013 -23.69 0.00000248776 700 22 7 31 [+] picture button
Dhtkd1 ENSRNOT00000029338 dehydrogenase E1 and transketolase domain containing 1 [Source:RefSeq_peptide;Acc:NP_001020891]
17.7347 -22.33 0.00000248806 700 16 3 24 [+] picture button
Riok3_predicted ENSRNOT00000039377 Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649]Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649] BY ORTHOLOGY TO:ZK632.3.2
17.4105 -15.37 0.0000027829 397 18 7 45 [+] picture button
RGD1561223_predicted ENSRNOT00000029602 gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313]gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313] BY ORTHOLOGY TO:ENSMUST00000096108
17.1124 -18.06 0.00000363208 700 17 4 26 [+] picture button
Slc35b1 ENSRNOT00000006179 Solute carrier family 35 member B1 (UDP-galactose transporter-related protein 1) (UGTrel1). [Source:Uniprot/SWISSPROT;Acc:Q6V7K3]
17.624 -17.5 0.00000415783 235 11 5 33 [+] picture button
Alg8 ENSRNOT00000055359 asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) [Source:RefSeq_peptide;Acc:NP_001029299]
16.3962 -18.05 0.00000456763 402 15 5 29 [+] picture button
Polq ENSRNOT00000034841 polymerase (DNA directed), theta [Source:MarkerSymbol;Acc:MGI:2155399]
16.5939 -22.66 0.00000483273 700 22 4 44 [+] picture button
Usp32_predicted ENSRNOT00000036814 TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809]TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809] BY ORTHOLOGY TO:ENSGACT00000017939
17.6942 -15.9 0.00000494318 700 16 8 23 [+] picture button
Foxh1_predicted ENSRNOT00000020696 forkhead box H1 [Source:MarkerSymbol;Acc:MGI:1347465]forkhead box H1 [Source:MarkerSymbol;Acc:MGI:1347465] BY ORTHOLOGY TO:ENSMUST00000037824
16.3733 -19.44 0.00000545783 83 4 3 14 [+] picture button
Josd2_predicted ENSRNOT00000026379 Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2]Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2] BY ORTHOLOGY TO:ENSORLT00000014254
17.0555 -19.76 0.00000593291 147 7 8 22 [+] picture button
Coro1c_predicted ENSRNOT00000044751 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5] BY ORTHOLOGY TO:ENST00000326495
16.9534 -21.26 0.00000596386 700 18 7 26 [+] picture button
LOC361596 ENSRNOT00000019059 Isocitrate dehydrogenase [NADP], mitochondrial precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M). [Source:Uniprot/SWISSPROT;Acc:P56574]
16.7144 -19.38 0.00000606759 284 13 7 65 [+] picture button
Rtcd1 ENSRNOT00000020149 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_001004227]
16.6007 -17.43 0.00000660249 243 15 8 49 [+] picture button
Plk4_predicted ENSRNOT00000016946 Plk4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZVS3]Plk4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZVS3] BY ORTHOLOGY TO:ENSDART00000043866
16.3494 -17.77 0.00000724355 700 12 2 20 [+] picture button
Prss22_predicted ENSRNOT00000060888 Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4]Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4] BY ORTHOLOGY TO:ENSOANT00000006171
16.7144 -12.94 0.0000074317 269 12 6 38 [+] picture button
RGD1560783_predicted ENSRNOT00000044274 Protein FAM118A. [Source:Uniprot/SWISSPROT;Acc:Q9NWS6]Protein FAM118A. [Source:Uniprot/SWISSPROT;Acc:Q9NWS6] BY ORTHOLOGY TO:ENSMMUT00000032369
17.1124 -19.68 0.00000814871 700 17 6 27 [+] picture button
Pbx2 ENSRNOT00000041201 pre-B-cell leukemia homeobox 2 [Source:RefSeq_peptide;Acc:NP_001002828]
16.5054 -18.36 0.00000838662 700 17 5 20 [+] picture button
Limk2 ENSRNOT00000057669 LIM domain kinase 2 (EC 2.7.11.1) (LIMK-2). [Source:Uniprot/SWISSPROT;Acc:P53670]
17.2393 -21.43 0.00000875402 700 15 6 26 [+] picture button
RGD1311487 ENSRNOT00000028747 similar to TNF intracellular domain-interacting protein [Source:RefSeq_peptide;Acc:NP_001020290]
16.9418 -22.9 0.0000089936 103 5 5 15 [+] picture button
Ntn1 ENSRNOT00000005255 netrin 1 [Source:RefSeq_peptide;Acc:NP_446183]
16.5134 -21.02 0.00000957622 700 14 3 23 [+] picture button
LOC363675 ENSRNOT00000037531 similar to es 64 (LOC363675), mRNA [Source:RefSeq_dna;Acc:NM_001014229]
16.2596 -17.75 0.0000107026 700 14 4 40 [+] picture button
Acads ENSRNOT00000001556 Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.2) (SCAD) (Butyryl-CoA dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P15651]
17.0653 -20.15 0.0000116283 477 19 4 42 [+] picture button
Arg2 ENSRNOT00000015083 Arginase-2, mitochondrial precursor (EC 3.5.3.1) (Arginase II) (Non- hepatic arginase) (Kidney-type arginase). [Source:Uniprot/SWISSPROT;Acc:O08701]
16.8281 -22.42 0.0000129327 264 15 4 52 [+] picture button
Grid2ip_predicted ENSRNOT00000041416 Homolog of Homo sapiens "PREDICTED "similar to Grid2ip protein [Source:IPI;Acc:IPI00248627]"Homolog of Homo sapiens "PREDICTED "similar to Grid2ip protein [Source:IPI;Acc:IPI00248627]" BY ORTHOLOGY TO:SINFRUT00000180703
17.0441 -14.93 0.0000136825 320 16 5 57 [+] picture button
Nkd1_predicted ENSRNOT00000019301 naked cuticle homolog 1 [Source:RefSeq_peptide;Acc:NP_149110]naked cuticle homolog 1 [Source:RefSeq_peptide;Acc:NP_149110] BY ORTHOLOGY TO:ENSORLT00000017426
18.247 -23.79 0.0000136935 452 15 6 32 [+] picture button

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Download table: GFF TXT
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