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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7d*

1000 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Rabggtb ENSRNOT00000013660 Geranylgeranyl transferase type-2 subunit beta (EC 2.5.1.60) (Geranylgeranyl transferase type II subunit beta) (Rab geranylgeranyltransferase subunit beta) (Rab geranyl- geranyltransferase subunit beta) (Rab GG transferase beta) (Rab GGTase beta). [Source:Uniprot/SWISSPROT;Acc:Q08603]
15.8603 -3.32 0.000000827762 330 16 5 52 [+] picture button
Tubgcp5_predicted ENSRNOT00000015789 NOT ANNOTATED
14.3122 -6.98 0.000001 700 13 1 12 [+] picture button
ENSRNOT00000033618 NOT ANNOTATED
14.7772 -15.14 0.000001 700 12 1 17 [+] picture button
Frrs1 ENSRNOT00000021988 ferric-chelate reductase 1 [Source:MarkerSymbol;Acc:MGI:108076]
15.2232 -19.8 0.00000192139 700 16 2 29 [+] picture button
Renbp ENSRNOT00000056337 N-acylglucosamine 2-epimerase (EC 5.1.3.8) (GlcNAc 2-epimerase) (N- acetyl-D-glucosamine 2-epimerase) (AGE) (Renin-binding protein) (RnBP). [Source:Uniprot/SWISSPROT;Acc:P51607]
16.179 -25.19 0.00000304125 700 20 4 32 [+] picture button
Tubgcp5_predicted ENSRNOT00000055989 Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8]Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8] BY ORTHOLOGY TO:ENSMMUT00000007789
14.8329 -6.98 0.00000834914 499 20 6 37 [+] picture button
ENSRNOT00000060306 NOT ANNOTATED
15.097 -20.72 0.0000144043 700 11 1 15 [+] picture button
Mmp19_predicted ENSRNOT00000008909 Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542]Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542] BY ORTHOLOGY TO:ENSMMUT00000008819
15.0262 -14.57 0.0000161287 700 14 3 19 [+] picture button
Q9D6J0_MOUSE ENSRNOT00000061274 Adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019J01 product:hypothetical Serine-rich region profile containing protein, full insert sequence. [Source:Uniprot/SPTREMBL;Acc:Q9D6J0]
14.9658 -7.8 0.0000180807 700 14 1 21 [+] picture button
Stxbp4_predicted ENSRNOT00000041119 Syntaxin-binding protein 4 (Syntaxin 4-interacting protein) (STX4- interacting protein) (Synip). [Source:Uniprot/SWISSPROT;Acc:Q6ZWJ1]Syntaxin-binding protein 4 (Syntaxin 4-interacting protein) (STX4- interacting protein) (Synip). [Source:Uniprot/SWISSPROT;Acc:Q6ZWJ1] BY ORTHOLOGY TO:SINFRUT00000148810
14.5545 -16.22 0.000025151 700 22 1 28 [+] picture button
Irx3_predicted ENSRNOT00000015583 Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1). [Source:Uniprot/SWISSPROT;Acc:P78415]Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1). [Source:Uniprot/SWISSPROT;Acc:P78415] BY ORTHOLOGY TO:ENSCAFT00000015031
14.3545 -3.32 0.0000401221 339 15 6 38 [+] picture button
Fam3c ENSRNOT00000007886 family with sequence similarity 3, member C [Source:RefSeq_peptide;Acc:NP_942066]
16.3393 -21.21 0.0000406323 700 18 6 29 [+] picture button
Olfml2b_predicted ENSRNOT00000004117 olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256]olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256] BY ORTHOLOGY TO:ENST00000294794
15.4232 -3.57 0.0000482433 470 17 5 33 [+] picture button
Tmod3 ENSRNOT00000013852 tropomodulin 3 [Source:RefSeq_peptide;Acc:NP_001011997]
15.9961 -19.28 0.0000526518 474 18 4 30 [+] picture button
LOC367134 ENSRNOT00000051207 similar to 60S ribosomal protein L7a (LOC367134), mRNA [Source:RefSeq_dna;Acc:XR_008300]
14.8693 -15.08 0.0000535076 700 13 1 17 [+] picture button
Bag3 ENSRNOT00000027616 Bcl2-associated athanogene 3 [Source:RefSeq_peptide;Acc:NP_001011936]
15.253 -12.51 0.0000558183 502 19 7 35 [+] picture button
RGD1564178_predicted ENSRNOT00000020643 Growth differentiation factor 3. [Source:Uniprot/SPTREMBL;Acc:A2SY89]
14.8596 -11.17 0.0000562999 700 15 1 17 [+] picture button
RGD1306433_predicted ENSRNOT00000043408 CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896]CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896] BY ORTHOLOGY TO:CG11342-RA
14.7304 -9.75 0.0000575066 359 20 4 47 [+] picture button
Crim1_predicted ENSRNOT00000005983 Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2]Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2] BY ORTHOLOGY TO:ENSDART00000050534
16.0011 -15.55 0.0000575189 700 23 8 36 [+] picture button
Gpr27 ENSRNOT00000014455 Probable G-protein coupled receptor 27 (Super conserved receptor expressed in brain 1). [Source:Uniprot/SWISSPROT;Acc:Q9JJH3]
15.8964 -15.55 0.0000659036 700 19 5 26 [+] picture button
Abca2 ENSRNOT00000020339 ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2). [Source:Uniprot/SWISSPROT;Acc:Q9ESR9]
15.0381 -16.9 0.000066075 655 17 4 27 [+] picture button
RGD1308329_predicted ENSRNOT00000011061 WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03]WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03] BY ORTHOLOGY TO:ENSGALT00000002822
16.3496 -10.65 0.0000705981 390 16 7 44 [+] picture button
LOC683924 ENSRNOT00000011217 CDNA FLJ31166 fis, clone KIDNE1000143 (SWRP5927). [Source:Uniprot/SPTREMBL;Acc:Q96NA7]CDNA FLJ31166 fis, clone KIDNE1000143 (SWRP5927). [Source:Uniprot/SPTREMBL;Acc:Q96NA7] BY ORTHOLOGY TO:ENSGALT00000022982
15.1419 -12.01 0.0000757421 700 12 2 18 [+] picture button
Q63274_RAT ENSRNOT00000056464 Kallikrein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q63274]
14.6233 -19.75 0.0000788095 700 10 1 9 [+] picture button
Olr720_predicted ENSRNOT00000008676 olfactory receptor Olr720 [Source:RefSeq_peptide;Acc:NP_001001067]
14.3775 -5.34 0.000112353 700 6 2 13 [+] picture button
Cops4 ENSRNOT00000003046 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q68FS2]
16.8303 -15.34 0.000120027 318 16 6 71 [+] picture button
Ets2 ENSRNOT00000002247 C-ets-2 protein. [Source:Uniprot/SWISSPROT;Acc:P15036]C-ets-2 protein. [Source:Uniprot/SWISSPROT;Acc:P15036] BY ORTHOLOGY TO:ENSOANT00000010247
14.3488 -12.11 0.000121749 700 16 3 23 [+] picture button
Epb4.1l2 ENSRNOT00000037224 erythrocyte protein band 4.1-like 2 [Source:MarkerSymbol;Acc:MGI:103009]
14.3117 -8.6 0.000135035 700 7 1 5 [+] picture button
Hspb3 ENSRNOT00000014627 Heat-shock protein beta-3 (HspB3). [Source:Uniprot/SWISSPROT;Acc:Q9QZ58]
14.9345 -14.22 0.000137814 700 17 4 25 [+] picture button
Tagap_predicted ENSRNOT00000025580 T-cell activation Rho GTPase-activating protein (T-cell activation GTPase-activating protein). [Source:Uniprot/SWISSPROT;Acc:Q8N103]T-cell activation Rho GTPase-activating protein (T-cell activation GTPase-activating protein). [Source:Uniprot/SWISSPROT;Acc:Q8N103] BY ORTHOLOGY TO:ENSMODT00000009606
14.9345 -17.16 0.000137814 700 19 6 47 [+] picture button
Pgr ENSRNOT00000038313 Progesterone receptor (PR). [Source:Uniprot/SWISSPROT;Acc:Q63449]
16.3733 -9.43 0.000140594 283 17 5 62 [+] picture button
Uox ENSRNOT00000021970 Uricase (EC 1.7.3.3) (Urate oxidase). [Source:Uniprot/SWISSPROT;Acc:P09118]
14.5018 -15.54 0.000144536 408 19 2 45 [+] picture button
Kcnmb4 ENSRNOT00000030847 Calcium-activated potassium channel subunit beta 4 (Calcium-activated potassium channel, subfamily M subunit beta 4) (Maxi K channel subunit beta 4) (BK channel subunit beta 4) (Slo-beta 4) (K(VCA)beta 4) (Charybdotoxin receptor subunit beta 4) (BKbeta4). [Source:Uniprot/SWISSPROT;Acc:Q9ESK8]
14.9222 -11.31 0.000151946 361 20 6 52 [+] picture button
RGD1308276 ENSRNOT00000027526 Protein FAM26B. [Source:Uniprot/SWISSPROT;Acc:Q5RJQ8]
14.7478 -11.8 0.000181862 492 21 5 34 [+] picture button
LOC686566 ENSRNOT00000038519 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5] BY ORTHOLOGY TO:ENSPTRT00000021702
15.6005 -15.67 0.000197703 700 17 4 31 [+] picture button
LOC689240 ENSRNOT00000023678 Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30]Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30] BY ORTHOLOGY TO:ENSMODT00000037307
15.0238 -15.73 0.000243483 700 13 7 20 [+] picture button
Slc38a1 ENSRNOT00000008138 solute carrier family 38, member 1 [Source:RefSeq_peptide;Acc:NP_620187]
14.5577 -4.73 0.00025046 430 16 5 32 [+] picture button
Olr51_predicted ENSRNOT00000020678 olfactory receptor Olr51 [Source:RefSeq_peptide;Acc:NP_001001021]
14.727 -16.46 0.000250841 700 14 2 17 [+] picture button
Fbxo38 ENSRNOT00000025790 F-box protein 38 [Source:MarkerSymbol;Acc:MGI:2444639]
15.9185 -9.92 0.000251568 216 10 10 23 [+] picture button
Nudt9 ENSRNOT00000002973 ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (Nucleoside diphosphate- linked moiety X motif 9) (Nudix motif 9). [Source:Uniprot/SWISSPROT;Acc:Q5XIG0]
15.691 -7.97 0.000257108 247 11 5 34 [+] picture button
RGD1564342_predicted ENSRNOT00000030991 Serine/threonine-protein kinase Nek10 (EC 2.7.11.1) (NimA-related protein kinase 10). [Source:Uniprot/SWISSPROT;Acc:Q6ZWH5]Serine/threonine-protein kinase Nek10 (EC 2.7.11.1) (NimA-related protein kinase 10). [Source:Uniprot/SWISSPROT;Acc:Q6ZWH5] BY ORTHOLOGY TO:ENSMMUT00000027137
16.1241 -20.12 0.00025939 700 11 2 16 [+] picture button
Atpbd1c ENSRNOT00000001722 protein x 0004 [Source:RefSeq_peptide;Acc:NP_973720]
15.2362 -6.94 0.000290309 262 14 4 56 [+] picture button
Gcg ENSRNOT00000007356 Glucagon precursor [Contains: Glicentin; Glicentin-related polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon; Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide 1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36) (GLP-1(7-36)); Glucagon-like pe [Source:Uniprot/SWISSPROT;Acc:P06883]
15.6031 -13.85 0.000313874 700 16 2 21 [+] picture button
Exosc7 ENSRNOT00000005975 Exosc7 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5EB65]
15.4636 -8.61 0.000321179 127 4 4 15 [+] picture button
Upb1 ENSRNOT00000058237 ureidopropionase, beta [Source:MarkerSymbol;Acc:MGI:2143535]
16.0753 -11.07 0.000382076 700 21 2 28 [+] picture button
RGD1306783 ENSRNOT00000003636 Uncharacterized protein C1orf156 homolog. [Source:Uniprot/SWISSPROT;Acc:Q4KM84]
16.0753 -13.98 0.000388698 700 13 3 23 [+] picture button
Agxt2 ENSRNOT00000059952 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate aminotransferase) (Beta- ALAAT II) (D-AIBAT). [Source:Uniprot/SWISSPROT;Acc:Q64565]
14.8505 -14 0.000419255 604 17 3 24 [+] picture button
Nfyb ENSRNOT00000014122 Nuclear transcription factor Y subunit beta (Nuclear transcription factor Y subunit B) (NF-YB) (CAAT-box DNA-binding protein subunit B) (CCAAT-binding transcription factor subunit A) (CBF-A). [Source:Uniprot/SWISSPROT;Acc:P63140]
14.8664 -13.22 0.000457203 700 18 7 33 [+] picture button
Stk16 ENSRNOT00000026194 Serine/threonine-protein kinase 16 (EC 2.7.11.1) (Protein kinase PKL12) (Myristoylated and palmitoylated serine/threonine-protein kinase) (MPSK) (TGF-beta-stimulated factor 1) (TSF-1). [Source:Uniprot/SWISSPROT;Acc:P57760]
16.9418 -13.3 0.000473191 284 11 4 39 [+] picture button
RGD1560606_predicted ENSRNOT00000008317 similar to down-regulated in metastasis (predicted) (RGD1560606_predicted), mRNA [Source:RefSeq_dna;Acc:XR_009342]
14.7468 -9.99 0.000481062 700 16 3 24 [+] picture button

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Download table: GFF TXT
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