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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7d

851 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
19.7844 -25.41 0.0000000000000920453 175 8 7 20 [+] picture button
Sema4c_predicted ENSRNOT00000021956 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4] BY ORTHOLOGY TO:ENSORLT00000019166
16.2169 -18.98 0.0000000294605 700 26 9 60 [+] picture button
Pias4 ENSRNOT00000027441 Pias4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G041]
16.6911 -18.17 0.0000000595665 824 21 2 33 [+] picture button
Myc ENSRNOT00000006188 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P09416]
16.6007 -13.23 0.0000000734567 211 8 13 20 [+] picture button
RGD1562119_predicted ENSRNOT00000029868 Coiled-coil domain-containing protein 111. [Source:Uniprot/SWISSPROT;Acc:Q96LW4]Coiled-coil domain-containing protein 111. [Source:Uniprot/SWISSPROT;Acc:Q96LW4] BY ORTHOLOGY TO:ENSXETT00000003206
16.2827 -20.1 0.0000000757772 700 19 4 30 [+] picture button
Agxt2 ENSRNOT00000059952 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate aminotransferase) (Beta- ALAAT II) (D-AIBAT). [Source:Uniprot/SWISSPROT;Acc:Q64565]
16.2197 -16.36 0.000000161489 604 17 3 24 [+] picture button
Hspbp1 ENSRNOT00000024251 Hsp70-binding protein 1 (HspBP1) (Heat shock protein-binding protein 1) (Hsp70-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6IMX7]
16.3733 -18.45 0.000000191164 247 14 5 41 [+] picture button
LOC681499 ENSRNOT00000023067 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679] BY ORTHOLOGY TO:ENSPTRT00000023959
16.3864 -17.38 0.000000215448 700 18 8 34 [+] picture button
ENSRNOT00000011023 Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427]Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427] BY ORTHOLOGY TO:ENSCAFT00000002971
18.4248 -23.31 0.000000225526 316 18 5 57 [+] picture button
RGD1560587_predicted ENSRNOT00000041689 similar to Eph receptor A4 (predicted) (RGD1560587_predicted), mRNA [Source:RefSeq_dna;Acc:XR_007714]
16.2126 -24.96 0.000000295206 2478 5 3 5 [+] picture button
Zfyve26_predicted ENSRNOT00000016380 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
17.2733 -17.24 0.000000352332 700 18 4 36 [+] picture button
RGD1564821_predicted ENSRNOT00000006946 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906]N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906] BY ORTHOLOGY TO:ENSMMUT00000017610
16.25 -15.26 0.000000381097 558 14 8 24 [+] picture button
Lrig2_predicted ENSRNOT00000027042 Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898]Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898] BY ORTHOLOGY TO:ENSMMUT00000026841
18.7233 -22.76 0.000000574124 700 17 7 32 [+] picture button
Slc35d2_predicted ENSRNOT00000036212 UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24]UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24] BY ORTHOLOGY TO:SINFRUT00000160116
16.1581 -13.28 0.000000858875 442 16 6 29 [+] picture button
Apbb3 ENSRNOT00000024313 Amyloid beta A4 precursor protein-binding family B member 3 (Fe65-like protein 2) (Fe65L2). [Source:Uniprot/SWISSPROT;Acc:O35827]
16.7144 -17.58 0.000000916424 218 9 6 25 [+] picture button
Stxbp5 ENSRNOT00000049699 Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant larvae protein homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q9WU70]
16.5939 -16.18 0.00000094961 700 13 12 23 [+] picture button
ENSRNOT00000048206 NOT ANNOTATED
16.7225 -21.85 0.000001 700 14 1 13 [+] picture button
LOC257650 ENSRNOT00000038939 hippyragranin [Source:RefSeq_peptide;Acc:NP_671483]
16.2208 -17.65 0.000001 700 13 1 16 [+] picture button
Alkbh4_predicted ENSRNOT00000001939 Alkylated repair protein alkB homolog 4. [Source:Uniprot/SWISSPROT;Acc:Q9NXW9]Alkylated repair protein alkB homolog 4. [Source:Uniprot/SWISSPROT;Acc:Q9NXW9] BY ORTHOLOGY TO:ENST00000292566
16.5939 -18.37 0.000001 700 21 2 27 [+] picture button
RGD1560496_predicted ENSRNOT00000009620 Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4]Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4] BY ORTHOLOGY TO:ENSGALT00000018067
17.5482 -19.28 0.00000116427 700 18 5 41 [+] picture button
PENK_RAT ENSRNOT00000011892 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P04094]
17.42 -22.25 0.00000146981 314 18 8 53 [+] picture button
RGD1560408_predicted ENSRNOT00000024701 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346] BY ORTHOLOGY TO:ENSXETT00000042031
16.7593 -17.96 0.00000154834 372 15 8 39 [+] picture button
Pld3 ENSRNOT00000057177 Phospholipase D3 (EC 3.1.4.4) (PLD 3) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3). [Source:Uniprot/SWISSPROT;Acc:Q5FVH2]
16.2351 -18.11 0.00000160093 304 17 7 46 [+] picture button
LOC683868 ENSRNOT00000060260 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985] BY ORTHOLOGY TO:ENSGACT00000027449
16.3864 -22.69 0.00000180212 700 20 8 27 [+] picture button
Acadvl ENSRNOT00000024973 Very-long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.-) (VLCAD). [Source:Uniprot/SWISSPROT;Acc:P45953]
16.2596 -20.25 0.00000195969 113 5 6 25 [+] picture button
Poli_predicted ENSRNOT00000016189 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4] BY ORTHOLOGY TO:ENSGACT00000018347
16.4761 -22.44 0.00000230348 700 17 2 40 [+] picture button
Ngfb ENSRNOT00000022200 Beta-nerve growth factor precursor (Beta-NGF). [Source:Uniprot/SWISSPROT;Acc:P25427]
17.5103 -17.89 0.00000246281 152 9 9 22 [+] picture button
Riok3_predicted ENSRNOT00000039377 Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649]Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649] BY ORTHOLOGY TO:ZK632.3.2
17.6309 -16.01 0.0000027829 397 18 7 45 [+] picture button
RGD1359201 ENSRNOT00000003131 RGD1359201 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5HZX2]
16.5341 -18.8 0.00000348511 906 20 5 24 [+] picture button
RGD1561223_predicted ENSRNOT00000029602 gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313]gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313] BY ORTHOLOGY TO:ENSMUST00000096108
16.905 -20.52 0.00000363208 700 17 4 26 [+] picture button
Usp32_predicted ENSRNOT00000036814 TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809]TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809] BY ORTHOLOGY TO:ENSGACT00000017939
16.8517 -17.32 0.00000494318 700 16 8 23 [+] picture button
Gipc1 ENSRNOT00000005374 PDZ domain-containing protein GIPC1 (RGS19-interacting protein 1) (GAIP C-terminus-interacting protein) (RGS-GAIP-interacting protein) (GLUT1 C-terminal-binding protein) (GLUT1CBP). [Source:Uniprot/SWISSPROT;Acc:Q9Z254]
16.7785 -24.11 0.00000569691 516 18 6 35 [+] picture button
Map2k5 ENSRNOT00000051558 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q62862]
16.384 -15.68 0.00000617758 337 18 5 60 [+] picture button
Rtcd1 ENSRNOT00000020149 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_001004227]
16.487 -15.44 0.00000660249 243 15 8 49 [+] picture button
Prss22_predicted ENSRNOT00000060888 Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4]Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4] BY ORTHOLOGY TO:ENSOANT00000006171
17.5103 -16.06 0.0000074317 269 12 6 38 [+] picture button
Stard5_predicted ENSRNOT00000037996 Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5]Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5] BY ORTHOLOGY TO:ENSMMUT00000016202
16.5939 -14.75 0.00000771544 700 17 2 24 [+] picture button
RGD1309656_predicted ENSRNOT00000058788 transmembrane anterior posterior transformation 1 [Source:RefSeq_peptide;Acc:NP_699196]transmembrane anterior posterior transformation 1 [Source:RefSeq_peptide;Acc:NP_699196] BY ORTHOLOGY TO:ENSGACT00000022542
16.905 -25.07 0.00000787961 700 13 6 21 [+] picture button
RGD1308257 ENSRNOT00000025121 CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4]CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4] BY ORTHOLOGY TO:ENSMODT00000022922
16.179 -22.02 0.00000813674 700 21 5 33 [+] picture button
Rbm35b_predicted ENSRNOT00000026873 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0] BY ORTHOLOGY TO:ENSPTRT00000015229
16.3864 -19.67 0.00000839126 700 11 3 14 [+] picture button
RGD1308106_predicted ENSRNOT00000034477 RIKEN cDNA 1700105P06 gene [Source:MarkerSymbol;Acc:MGI:1915479]RIKEN cDNA 1700105P06 gene [Source:MarkerSymbol;Acc:MGI:1915479] BY ORTHOLOGY TO:ENSMUST00000025924
16.7276 -19 0.00000860103 700 17 5 24 [+] picture button
RGD1306153 ENSRNOT00000031243 RGD1306153 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FVM1]
16.3864 -22.39 0.00000860182 700 12 4 16 [+] picture button
LOC683774 ENSRNOT00000040165 Heparan-sulfate 6-O-sulfotransferase 2 (EC 2.8.2.-) (HS6ST-2). [Source:Uniprot/SWISSPROT;Acc:Q96MM7]Heparan-sulfate 6-O-sulfotransferase 2 (EC 2.8.2.-) (HS6ST-2). [Source:Uniprot/SWISSPROT;Acc:Q96MM7] BY ORTHOLOGY TO:ENSGACT00000022508
16.2827 -17.51 0.00000919054 700 14 4 20 [+] picture button
Faf1 ENSRNOT00000011765 FAS-associated factor 1 (Protein FAF1). [Source:Uniprot/SWISSPROT;Acc:Q924K2]
16.3647 -22.65 0.0000096955 700 15 3 20 [+] picture button
Pprc1_predicted ENSRNOT00000025221 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877] BY ORTHOLOGY TO:ENSMMUT00000001682
16.3749 -20.98 0.00000985341 700 18 7 31 [+] picture button
Etsrp71_predicted ENSRNOT00000031873 ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321]ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321] BY ORTHOLOGY TO:ENSORLT00000019930
16.3169 -16.44 0.00000989128 700 13 2 20 [+] picture button
LOC363675 ENSRNOT00000037531 similar to es 64 (LOC363675), mRNA [Source:RefSeq_dna;Acc:NM_001014229]
17.2829 -19.45 0.0000107026 700 14 4 40 [+] picture button
Pigv ENSRNOT00000000133 GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Phosphatidylinositol-glycan biosynthesis class V protein) (PIG-V). [Source:Uniprot/SWISSPROT;Acc:Q5KR61]
16.3407 -22.19 0.0000108678 563 17 5 33 [+] picture button
Acads ENSRNOT00000001556 Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.2) (SCAD) (Butyryl-CoA dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P15651]
17.7133 -21.65 0.0000116283 477 19 4 42 [+] picture button
Piga ENSRNOT00000004733 phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Source:RefSeq_peptide;Acc:NP_001025979]phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Source:RefSeq_peptide;Acc:NP_001025979] BY ORTHOLOGY TO:ENSGALT00000026721
17.3198 -20.55 0.0000124919 700 16 6 21 [+] picture button
RGD1307909_predicted ENSRNOT00000007946 Barrier-to-autointegration factor-like protein (BAF-L). [Source:Uniprot/SWISSPROT;Acc:Q9H503]Barrier-to-autointegration factor-like protein (BAF-L). [Source:Uniprot/SWISSPROT;Acc:Q9H503] BY ORTHOLOGY TO:ENSMMUT00000022549
16.2596 -15.96 0.0000133121 54 2 3 5 [+] picture button

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Download table: GFF TXT
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