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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-30b

238 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q6J9M5_PANTR ENSPTRT00000012595 Makorin ring finger protein 3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6J9M5]
16.5675 -17.43 0.00000000610598 1108 15 6 16 [+] picture button
XR_025607.1 ENSPTRT00000032192 PREDICTED: Pan troglodytes PGC-1-related estrogen receptor alpha coactivator (PPARGC1B), mRNA. [Source:RefSeq_dna;Acc:XR_025607]
16.8033 -9.45 0.00000000686984 146 8 14 15 [+] picture button
ASB3 ENSPTRT00000022178 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
18.1749 -13.6 0.000000100099 184 11 5 36 [+] picture button
HERC2 ENSPTRT00000012625 Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:O95714]
16.3017 -15.8 0.000000162646 480 21 9 51 [+] picture button
CUL2 ENSPTRT00000004474 Cullin-2 (CUL-2). [Source:Uniprot/SWISSPROT;Acc:Q13617]
16.3082 -10.73 0.000000216726 430 18 16 39 [+] picture button
PDSS1 ENSPTRT00000004356 Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-) (Decaprenyl pyrophosphate synthetase subunit 1) (Trans-prenyltransferase) (TPT). [Source:Uniprot/SWISSPROT;Acc:Q5T2R2]
16.1446 -14.21 0.00000023765 1000 15 8 23 [+] picture button
FAP ENSPTRT00000023310 Seprase (EC 3.4.21.-) (Fibroblast activation protein alpha) (Integral membrane serine protease) (170 kDa melanoma membrane-bound gelatinase). [Source:Uniprot/SWISSPROT;Acc:Q12884]
16.5746 -8.81 0.000000544621 285 15 8 54 [+] picture button
NKX2-2 ENSPTRT00000024735 Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:O95096]
15.8827 -13.18 0.00000086377 908 18 11 28 [+] picture button
AP3S1 ENSPTRT00000031765 AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma- 1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma- 3A-adaptin) (Clathrin-associated/assembly/adapter protein, small 3). [Source:Uniprot/SWISSPROT;Acc:Q92572]
15.3731 -7.77 0.00000110898 503 19 10 43 [+] picture button
SNRPD1 ENSPTRT00000018197 Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen). [Source:Uniprot/SWISSPROT;Acc:P62314]
15.4107 -14.9 0.00000122038 1240 17 8 19 [+] picture button
SLC7A10 ENSPTRT00000019999 Asc-type amino acid transporter 1 (Asc-1). [Source:Uniprot/SWISSPROT;Acc:Q9NS82]
16.5746 -11.78 0.00000195638 228 10 7 42 [+] picture button
POLR3E ENSPTRT00000014513 DNA-directed RNA polymerases III 80 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 5) (RPC5). [Source:Uniprot/SWISSPROT;Acc:Q9NVU0]
15.4863 -11.63 0.00000253444 1000 14 7 14 [+] picture button
MYCBP2 ENSPTRT00000043801 Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein). [Source:Uniprot/SWISSPROT;Acc:O75592]
16.0371 -18.15 0.0000026045 719 19 8 28 [+] picture button
REV1 ENSPTRT00000022803 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). [Source:Uniprot/SWISSPROT;Acc:Q9UBZ9]
16.0997 -13.44 0.00000484452 769 18 8 30 [+] picture button
PARP16 ENSPTRT00000013236 Poly [ADP-ribose] polymerase 16 (EC 2.4.2.30) (PARP-16). [Source:Uniprot/SWISSPROT;Acc:Q8N5Y8]
16.8411 -20 0.00000630064 1307 10 7 12 [+] picture button
PQLC3 ENSPTRT00000021722 PQ loop repeat-containing protein 3 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N755]
15.2129 -12.27 0.00000844531 1040 21 4 29 [+] picture button
SEC23B ENSPTRT00000024700 Protein transport protein Sec23B (SEC23-related protein B). [Source:Uniprot/SWISSPROT;Acc:Q15437]
15.5066 -12.58 0.00000894841 665 14 6 24 [+] picture button
GABRB1 ENSPTRT00000029887 Gamma-aminobutyric-acid receptor subunit beta-1 precursor (GABA(A) receptor subunit beta-1). [Source:Uniprot/SWISSPROT;Acc:P18505]
17.2117 -9.21 0.00000907636 410 15 4 32 [+] picture button
GALNT3 ENSPTRT00000023329 Polypeptide N-acetylgalactosaminyltransferase 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (Polypeptide GalNAc transferase 3) (GalNAc-T3) (pp-GaNTase 3). [Source:Uniprot/SWISSPROT;Acc:Q14435]
15.5938 -16.75 0.00000911815 1846 11 8 13 [+] picture button
SAMHD1 ENSPTRT00000025051 SAM domain and HD domain-containing protein 1 (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5). [Source:Uniprot/SWISSPROT;Acc:Q9Y3Z3]
15.4974 -15.21 0.0000134264 1000 8 4 11 [+] picture button
RRAD ENSPTRT00000015133 GTP-binding protein RAD (RAS associated with diabetes) (RAD1). [Source:Uniprot/SWISSPROT;Acc:P55042]
16.1012 -13.8 0.0000135634 388 19 7 49 [+] picture button
DMXL2 ENSPTRT00000013057 Protein DmX-like 2 (Rabconnectin-3). [Source:Uniprot/SWISSPROT;Acc:Q8TDJ6]
15.6519 -12.51 0.0000159223 1243 11 2 17 [+] picture button
MAL ENSPTRT00000022674 Myelin and lymphocyte protein (T-lymphocyte maturation-associated protein). [Source:Uniprot/SWISSPROT;Acc:P21145]
17.1069 -15.2 0.0000164391 539 20 5 31 [+] picture button
ENSPTRT00000012955 PREDICTED: similar to RIKEN cDNA 4930424G05 [Source:RefSeq_peptide_predicted;Acc:XP_113825] [from human gene ENSG00000184710]PREDICTED: similar to RIKEN cDNA 4930424G05 [Source:RefSeq_peptide_predicted;Acc:XP_113825] [from human gene ENSG00000184710] BY ORTHOLOGY TO:ENSXETT00000030950
18.5179 -13.32 0.0000164583 261 13 8 45 [+] picture button
TUBGCP5 ENSPTRT00000012583 Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8]
17.1415 -15.28 0.0000171595 642 21 6 36 [+] picture button
RKHD3 ENSPTRT00000013593 RNA-binding protein MEX3B (RING finger and KH domain-containing protein 3) (RING finger protein 195). [Source:Uniprot/SWISSPROT;Acc:Q6ZN04]
15.2894 -12.99 0.0000190952 1372 12 9 15 [+] picture button
KIAA1370 ENSPTRT00000013082 KIAA1370 (KIAA1370), mRNA [Source:RefSeq_dna;Acc:NM_019600]
15.2703 -10.95 0.0000230926 823 21 10 29 [+] picture button
XR_023925.1 ENSPTRT00000014469 PREDICTED: Pan troglodytes hypothetical protein LOC471766 (LOC471766), mRNA. [Source:RefSeq_dna;Acc:XR_023925]
16.9677 -24.86 0.0000243936 1794 7 8 7 [+] picture button
ARL6IP6 ENSPTRT00000023253 ADP-ribosylation-like factor 6 interacting protein 6 [Source:RefSeq_peptide;Acc:NP_689735]
17.2736 -16.37 0.0000248198 1343 8 7 9 [+] picture button
TANK ENSPTRT00000023303 TRAF family member-associated NF-kappa-B activator (TRAF-interacting protein) (I-TRAF). [Source:Uniprot/SWISSPROT;Acc:Q92844]
16.0435 -11.6 0.0000254933 655 17 6 22 [+] picture button
ORC2L ENSPTRT00000023708 Origin recognition complex subunit 2. [Source:Uniprot/SWISSPROT;Acc:Q13416]
16.7765 -17.59 0.0000262436 1129 16 8 17 [+] picture button
CEP76 ENSPTRT00000018149 Centrosomal protein of 76 kDa (Cep76 protein). [Source:Uniprot/SWISSPROT;Acc:Q8TAP6]
15.4872 -8.14 0.0000266533 681 16 5 23 [+] picture button
IL21R ENSPTRT00000014595 Interleukin-21 receptor precursor (IL-21R) (Novel interleukin receptor). [Source:Uniprot/SWISSPROT;Acc:Q9HBE5]
15.6671 -17.45 0.0000376544 1306 22 8 27 [+] picture button
NEUROD1 ENSPTRT00000023551 Neurogenic differentiation factor 1 (NeuroD1) (NeuroD). [Source:Uniprot/SWISSPROT;Acc:Q13562]
15.4464 -13.48 0.0000390476 1302 16 9 17 [+] picture button
HIRIP3 ENSPTRT00000014722 HIRA-interacting protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9BW71]
16.4603 -9.44 0.0000455761 211 12 5 48 [+] picture button
PAX3 ENSPTRT00000024032 Paired box protein Pax-3 (HUP2). [Source:Uniprot/SWISSPROT;Acc:P23760]
15.9278 -21.07 0.000048707 1000 17 5 27 [+] picture button
WDR70 ENSPTRT00000031199 WD repeat domain 70 [Source:RefSeq_peptide;Acc:NP_060504]
16.1174 -12.31 0.0000650439 100 3 5 15 [+] picture button
PITRM1 ENSPTRT00000004107 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (hPreP) (Pitrilysin metalloproteinase 1) (Metalloprotease 1) (hMP1). [Source:Uniprot/SWISSPROT;Acc:Q5JRX3]
15.3796 -8.8 0.0000651271 309 14 5 38 [+] picture button
DNTT ENSPTRT00000005281 DNA nucleotidylexotransferase (EC 2.7.7.31) (Terminal addition enzyme) (Terminal deoxynucleotidyltransferase) (Terminal transferase). [Source:Uniprot/SWISSPROT;Acc:P04053]
15.6645 -9.54 0.0000719368 319 17 6 62 [+] picture button
XR_021628.1 ENSPTRT00000046282 PREDICTED: Pan troglodytes hypothetical protein LOC742599 (LOC742599), mRNA. [Source:RefSeq_dna;Acc:XR_021628]
15.7507 -14.54 0.0000737876 1592 6 4 10 [+] picture button
JMJD1A ENSPTRT00000045387 JmjC domain-containing histone demethylation protein 2A (EC 1.14.11.-) (Jumonji domain-containing protein 1A). [Source:Uniprot/SWISSPROT;Acc:Q9Y4C1]
15.5779 -9.34 0.0000762621 597 18 10 38 [+] picture button
LYSMD2 ENSPTRT00000013059 LysM and putative peptidoglycan-binding domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IV50]
16.1674 -14.66 0.0000773297 542 16 7 38 [+] picture button
EPC2 ENSPTRT00000023218 Enhancer of polycomb homolog 2. [Source:Uniprot/SWISSPROT;Acc:Q52LR7]
15.7523 -9.26 0.0000826598 1190 18 9 23 [+] picture button
C19orf50 ENSPTRT00000019757 Uncharacterized protein C19orf50 (Fragment). [Source:Uniprot/SPTREMBL;Acc:O76098]
16.1484 -14.26 0.0000922811 702 18 7 26 [+] picture button
NT5C1B ENSPTRT00000044225 Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol dehydrogenase PAN2). [Source:Uniprot/SWISSPROT;Acc:Q9HBH5]
16.4187 -14.73 0.0000946394 564 22 6 37 [+] picture button
KCTD5 ENSPTRT00000014127 BTB/POZ domain-containing protein KCTD5. [Source:Uniprot/SWISSPROT;Acc:Q9NXV2]
16.3782 -17.03 0.0000951233 1000 13 5 19 [+] picture button
GDF10 ENSPTRT00000043773 Bone morphogenetic protein 3b precursor (BMP-3b) (Growth/differentiation factor 10) (GDF-10) (Bone-inducing protein) (BIP). [Source:Uniprot/SWISSPROT;Acc:P55107]
17.9287 -28.14 0.0000963255 781 15 5 19 [+] picture button
PPIL3 ENSPTRT00000046989 Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (Cyclophilin J) (CyPJ). [Source:Uniprot/SWISSPROT;Acc:Q9H2H8]
16.1576 -9.1 0.000104933 439 15 5 37 [+] picture button
PGGT1B ENSPTRT00000031756 Geranylgeranyl transferase type-1 subunit beta (EC 2.5.1.59) (Geranylgeranyl transferase type I subunit beta) (Type I protein geranyl-geranyltransferase subunit beta) (GGTase-I-beta). [Source:Uniprot/SWISSPROT;Acc:P53609]
15.6137 -8.77 0.00010561 522 23 8 45 [+] picture button
SPATA5L1 ENSPTRT00000012986 spermatogenesis associated 5-like 1 [Source:RefSeq_peptide;Acc:NP_076968]
15.4316 -7.09 0.000114731 108 7 4 19 [+] picture button

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