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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-1a

582 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NP_001025767.1 ENSGALT00000009145 inositol hexaphosphate kinase 2 [Source:RefSeq_peptide;Acc:NP_001025767]
17.2802 -15.7 0.000000000162292 600 11 10 16 [+] picture button
Q5ZIZ0_CHICK ENSGALT00000004426 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZIZ0]
16.0031 -8.48 0.000000000479126 162 10 7 30 [+] picture button
P25A_HUMAN ENSGALT00000020444 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
19.661 -19.07 0.00000000271308 268 12 10 32 [+] picture button
CLCN3 ENSGALT00000015746 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51790]
18.8626 -17.5 0.000000018002 412 14 8 32 [+] picture button
NP_001005427.1 ENSGALT00000017555 mesenchyme homeobox 2 [Source:RefSeq_peptide;Acc:NP_001005427]
15.9682 -15.5 0.00000003623 944 7 8 8 [+] picture button
XR_026944.1 ENSGALT00000025947 PREDICTED: Gallus gallus similar to chronic myelogenous leukemia tumor antigen 66 (LOC428379), mRNA. [Source:RefSeq_dna;Acc:XR_026944]
16.346 -8.91 0.0000000448157 600 6 1 15 [+] picture button
NUCL_CHICK ENSGALT00000012486 Nucleolin (Protein C23). [Source:Uniprot/SWISSPROT;Acc:P15771]
16.0875 -15.73 0.0000000802243 391 14 11 26 [+] picture button
GTF2B ENSGALT00000010015 Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II). [Source:Uniprot/SWISSPROT;Acc:Q00403]
16.5746 -13.33 0.00000013063 196 9 3 39 [+] picture button
WDR48_CHICK ENSGALT00000031283 WD repeat protein 48. [Source:Uniprot/SWISSPROT;Acc:Q5F3K4]
16.4911 -19.28 0.00000016152 1908 3 1 3 [+] picture button
MON2 ENSGALT00000038683 MON2 homolog [Source:RefSeq_peptide;Acc:NP_055841]
17.1554 -15.11 0.000000240968 492 14 12 26 [+] picture button
TPPC3_CHICK ENSGALT00000003587 Trafficking protein particle complex subunit 3. [Source:Uniprot/SWISSPROT;Acc:Q5ZI57]
16.0334 -9.23 0.000000376138 429 11 3 14 [+] picture button
YIPF5 ENSGALT00000011976 Protein YIPF5 (YIP1 family member 5) (YPT-interacting protein 1 A) (Five-pass transmembrane protein localizing in the Golgi apparatus and the endoplasmic reticulum 5) (Smooth muscle cell-associated protein 5) (SMAP-5). [Source:Uniprot/SWISSPROT;Acc:Q969M3]
16.417 -14.57 0.000000502903 307 12 2 26 [+] picture button
NP_990158.1 ENSGALT00000034644 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:RefSeq_peptide;Acc:NP_990158]
20.1595 -19.83 0.000000971838 417 13 12 44 [+] picture button
NP_001006179.1 ENSGALT00000014296 Sec23 homolog B [Source:RefSeq_peptide;Acc:NP_001006179]
16.9671 -11.45 0.00000126223 349 13 5 27 [+] picture button
NP_001034376.1 ENSGALT00000019060 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) [Source:RefSeq_peptide;Acc:NP_001034376]
17.832 -11.42 0.00000134754 282 12 2 30 [+] picture button
C4orf34 ENSGALT00000023145 Uncharacterized protein C4orf34. [Source:Uniprot/SWISSPROT;Acc:Q96QK8]
16.9938 -16.48 0.00000142361 365 14 7 35 [+] picture button
NP_001029996.1 ENSGALT00000036681 XK-related protein 9 [Source:RefSeq_peptide;Acc:NP_001029996]
16.1174 -12.22 0.00000150589 264 15 2 39 [+] picture button
CNN3 ENSGALT00000039077 Calponin-3 (Calponin, acidic isoform). [Source:Uniprot/SWISSPROT;Acc:Q15417]
17.237 -13.21 0.00000204061 430 14 8 33 [+] picture button
KLHL11 ENSGALT00000005592 Kelch-like protein 11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NVR0]
16.5229 -13.25 0.00000397616 600 16 5 30 [+] picture button
ENSGALT00000006438 PREDICTED: Bos taurus similar to centaurin gamma2 (LOC522241), mRNA. [Source:RefSeq_dna;Acc:XR_028590]PREDICTED: Bos taurus similar to centaurin gamma2 (LOC522241), mRNA. [Source:RefSeq_dna;Acc:XR_028590] BY ORTHOLOGY TO:ENSBTAT00000033190
16.417 -11.84 0.0000042845 600 17 6 24 [+] picture button
RSBN1L ENSGALT00000013555 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]
17.7939 -13.26 0.00000484532 600 14 7 33 [+] picture button
PHF12 ENSGALT00000006417 PHD finger protein 12 (PHD factor 1) (Pf1). [Source:Uniprot/SWISSPROT;Acc:Q96QT6]
16.8265 -15.68 0.00000511698 600 17 9 34 [+] picture button
CH60_CHICK ENSGALT00000013137 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60). [Source:Uniprot/SWISSPROT;Acc:Q5ZL72]
17.8486 -12.68 0.00000644668 652 10 6 20 [+] picture button
RASA1 ENSGALT00000037665 Ras GTPase-activating protein 1 (GTPase-activating protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP). [Source:Uniprot/SWISSPROT;Acc:P20936]
16.1765 -11.37 0.00000707328 657 19 10 31 [+] picture button
GNPDA2 ENSGALT00000022980 glucosamine-6-phosphate deaminase 2 [Source:RefSeq_peptide;Acc:NP_612208]
17.7551 -15.54 0.00000741368 656 11 9 15 [+] picture button
NP_989988.1 ENSGALT00000037121 branched chain keto acid dehydrogenase E1, beta polypeptide [Source:RefSeq_peptide;Acc:NP_989988]
17.1297 -14.17 0.00000767986 340 12 3 31 [+] picture button
Q8UUQ8_CHICK ENSGALT00000008250 Clathrin heavy-chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8UUR0]
17.7028 -17.03 0.00000886571 884 9 10 11 [+] picture button
DOCK9 ENSGALT00000027273 Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide exchange factor zizimin-1). [Source:Uniprot/SWISSPROT;Acc:Q9BZ29]
16.9959 -11.16 0.0000154325 435 17 5 35 [+] picture button
THOC7 ENSGALT00000011817 Ngg1 interacting factor 3 like 1 binding protein 1 [Source:RefSeq_peptide;Acc:NP_079351]
16.6513 -11.39 0.0000159332 306 15 2 34 [+] picture button
NP_001026547.1 ENSGALT00000001824 embryonic ectoderm development [Source:RefSeq_peptide;Acc:NP_001026547]
17.0319 -10.11 0.000016718 206 10 9 29 [+] picture button
STAMBPL1 ENSGALT00000010235 AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding protein-like 1). [Source:Uniprot/SWISSPROT;Acc:Q96FJ0]
16.4603 -9.36 0.0000172858 251 10 2 22 [+] picture button
MTMR7 ENSGALT00000022188 Myotubularin-related protein 7 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q9Y216]
16.4269 -12.82 0.0000172954 600 12 1 24 [+] picture button
XR_027038.1 ENSGALT00000024902 PREDICTED: Gallus gallus similar to choline transporter-like protein 1, splice (LOC427301), mRNA. [Source:RefSeq_dna;Acc:XR_027038]
17.3858 -12.82 0.0000174364 355 10 3 22 [+] picture button
Q2MHD2_CHICK ENSGALT00000017361 Scaffold attachment factor A (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2MHD2]
17.4765 -16.71 0.000020977 600 17 9 35 [+] picture button
ENSGALT00000003371 cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase]cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase] BY ORTHOLOGY TO:B0414.5
18.6646 -19.33 0.0000214711 562 22 9 46 [+] picture button
ENSGALT00000034804 LOC565764 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P426]LOC565764 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P426] BY ORTHOLOGY TO:ENSDART00000023509
16.8385 -16.17 0.0000220753 352 14 3 31 [+] picture button
PDIK1L ENSGALT00000002218 Serine/threonine-protein kinase PDIK1L (EC 2.7.11.1) (PDLIM1- interacting kinase 1-like). [Source:Uniprot/SWISSPROT;Acc:Q8N165]
16.5229 -16.09 0.0000231441 600 18 7 31 [+] picture button
CCD93_CHICK ENSGALT00000019817 Coiled-coil domain-containing protein 93. [Source:Uniprot/SWISSPROT;Acc:Q5ZKI4]
18.7246 -20.3 0.0000248222 1110 12 1 12 [+] picture button
NBEA_CHICK ENSGALT00000027557 Protein neurobeachin (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9DDD5]
17.5009 -13.01 0.0000263304 354 11 6 26 [+] picture button
NP_001006291.1 ENSGALT00000006710 tumor differentially expressed protein 1 [Source:RefSeq_peptide;Acc:NP_001006291]
16.7646 -16.04 0.0000281525 795 7 1 13 [+] picture button
SNF5_CHICK ENSGALT00000009622 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. [Source:Uniprot/SWISSPROT;Acc:Q5ZK40]
16.4073 -10.77 0.000032214 328 15 8 42 [+] picture button
NP_001006299.1 ENSGALT00000040509 WD repeat domain 8 [Source:RefSeq_peptide;Acc:NP_001006299]
17.1465 -20.47 0.0000339122 515 13 3 25 [+] picture button
PUR2_CHICK ENSGALT00000025758 Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6. [Source:Uniprot/SWISSPROT;Acc:P21872]
16.7116 -14.38 0.0000341221 520 15 2 20 [+] picture button
NP_001025773.1 ENSGALT00000036221 eukaryotic translation initiation factor 4E member 3 [Source:RefSeq_peptide;Acc:NP_001025773]
16.9228 -13.42 0.0000357075 495 16 5 27 [+] picture button
APAF1 ENSGALT00000038230 Apoptotic protease-activating factor 1 (Apaf-1). [Source:Uniprot/SWISSPROT;Acc:O14727]
19.5466 -17.1 0.0000378675 264 11 5 25 [+] picture button
NP_001026626.1 ENSGALT00000007014 cell cycle progression 1 [Source:RefSeq_peptide;Acc:NP_001026626]
18.1439 -22.5 0.0000379886 609 13 3 23 [+] picture button
NP_989637.1 ENSGALT00000034278 platelet-derived growth factor alpha polypeptide [Source:RefSeq_peptide;Acc:NP_989637]
20.9183 -19.47 0.0000484823 269 13 5 40 [+] picture button
NP_001012625.1 ENSGALT00000008561 hypothetical protein LOC426797 [Source:RefSeq_peptide;Acc:NP_001012625]
16.882 -14.28 0.0000550543 436 19 10 41 [+] picture button
COPB2 ENSGALT00000008592 Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP) (p102). [Source:Uniprot/SWISSPROT;Acc:P35606]
20.0039 -14.74 0.0000563631 249 12 2 34 [+] picture button
NP_001005840.1 ENSGALT00000039574 T-cell immunomodulatory protein [Source:RefSeq_peptide;Acc:NP_001005840]
16.2128 -9.23 0.0000573225 563 16 2 27 [+] picture button

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Download table: GFF TXT
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