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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and bta-miR-139

658 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PDE3A ENSGALT00000037438 cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q14432]
17.0897 -23.31 0.00000000000415124 600 17 11 31 [+] picture button
XR_027087.1 ENSGALT00000020748 PREDICTED: Gallus gallus similar to sca1 (LOC420843), mRNA. [Source:RefSeq_dna;Acc:XR_027087]
17.4823 -21.4 0.000000000164926 600 18 9 35 [+] picture button
TBC1D1 ENSGALT00000022020 TBC1 domain family member 1. [Source:Uniprot/SWISSPROT;Acc:Q86TI0]
17.9025 -17.76 0.000000428159 370 13 2 34 [+] picture button
RKHD3 ENSGALT00000034143 RNA-binding protein MEX3B (RING finger and KH domain-containing protein 3) (RING finger protein 195). [Source:Uniprot/SWISSPROT;Acc:Q6ZN04]
17.14 -18.98 0.000000781752 600 16 9 41 [+] picture button
ZBTB26 ENSGALT00000001877 Zinc finger and BTB domain-containing protein 26 (Zinc finger protein 481) (Zinc finger protein Bioref). [Source:Uniprot/SWISSPROT;Acc:Q9HCK0]
16.1128 -17.27 0.000000884356 600 19 2 36 [+] picture button
NP_001006549.1 ENSGALT00000011434 large subunit GTPase 1 homolog [Source:RefSeq_peptide;Acc:NP_001006549]
17.5028 -28.06 0.00000248423 371 19 5 49 [+] picture button
DGUOK ENSGALT00000035676 Deoxyguanosine kinase, mitochondrial precursor (EC 2.7.1.113) (dGK). [Source:Uniprot/SWISSPROT;Acc:Q16854]
16.1778 -19.92 0.00000417905 211 9 4 36 [+] picture button
ATP7B ENSGALT00000027501 Copper-transporting ATPase 2 (EC 3.6.3.4) (Copper pump 2) (Wilson disease-associated protein). [Source:Uniprot/SWISSPROT;Acc:P35670]
16.4041 -16.18 0.00000453515 250 12 1 30 [+] picture button
MON1A_CHICK ENSGALT00000004607 Vacuolar fusion protein MON1 homolog A. [Source:Uniprot/SWISSPROT;Acc:Q5ZIH2]
15.7867 -16.93 0.00000572699 600 13 3 33 [+] picture button
GSC_CHICK ENSGALT00000017878 Homeobox protein goosecoid. [Source:Uniprot/SWISSPROT;Acc:P53545]
18.2142 -23.78 0.00000599065 167 9 4 29 [+] picture button
RAVER2 ENSGALT00000017964 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]
15.7794 -16.26 0.00000665366 375 17 8 41 [+] picture button
BTAF1 ENSGALT00000011235 TATA-binding protein-associated factor 172 (EC 3.6.1.-) (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B- TFIID transcription factor-associated 170 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O14981]
15.8407 -16.37 0.00000716938 600 13 9 23 [+] picture button
CSRP2_CHICK ENSGALT00000016683 Cysteine and glycine-rich protein 2 (Cysteine-rich protein 2) (CRP2) (Beta-cysteine-rich protein) (Beta-CRP). [Source:Uniprot/SWISSPROT;Acc:P50460]
17.196 -13.37 0.00000945944 234 8 3 30 [+] picture button
RAB11FIP5 ENSGALT00000025927 Rab11 family-interacting protein 5 (Rab11-FIP5) (Rab11-interacting protein Rip11) (Gamma-SNAP-associated factor 1) (Gaf-1) (Phosphoprotein pp75). [Source:Uniprot/SWISSPROT;Acc:Q9BXF6]
16.2603 -21.74 0.00000980082 600 11 1 16 [+] picture button
USP47 ENSGALT00000008932 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
17.196 -15.82 0.0000108783 264 13 10 37 [+] picture button
C10orf12 ENSGALT00000012342 Uncharacterized protein C10orf12. [Source:Uniprot/SWISSPROT;Acc:Q8N655]
17.6241 -19.7 0.0000169109 600 16 7 29 [+] picture button
XR_026734.1 ENSGALT00000013349 PREDICTED: Gallus gallus similar to protein geranylgeranyltransferase type I, beta subunit (LOC770633), mRNA. [Source:RefSeq_dna;Acc:XR_026734]
15.8719 -20.07 0.000019448 352 16 8 45 [+] picture button
NP_001026378.1 ENSGALT00000037655 TFIIA alpha, p55 [Source:RefSeq_peptide;Acc:NP_001026378]
16.1847 -16.01 0.0000198012 490 13 6 24 [+] picture button
NP_001006272.1 ENSGALT00000027469 calcium binding protein 39-like [Source:RefSeq_peptide;Acc:NP_001006272]
16.5444 -18.03 0.0000233291 400 12 3 20 [+] picture button
ENSGALT00000016642 nucleosome assembly proteinnucleosome assembly protein BY ORTHOLOGY TO:AAEL005567-RA
15.8791 -20.02 0.0000234516 665 10 4 10 [+] picture button
NP_989623.1 ENSGALT00000008229 wingless-type MMTV integration site family, member 7A [Source:RefSeq_peptide;Acc:NP_989623]
16.6303 -13.53 0.0000246636 124 4 4 14 [+] picture button
FBXO2 ENSGALT00000007421 F-box only protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9UK22]
16.1778 -17.49 0.0000274039 297 16 6 49 [+] picture button
SLC25A19 ENSGALT00000013002 Mitochondrial deoxynucleotide carrier (Solute carrier family 25 member 19) (Mitochondrial uncoupling protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9HC21]
16.9946 -28.14 0.0000311465 600 16 2 24 [+] picture button
RASAL2 ENSGALT00000006891 Ras GTPase-activating protein nGAP (RAS protein activator-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9UJF2]
16.2732 -15.96 0.0000312674 600 20 8 29 [+] picture button
NUDT9 ENSGALT00000017784 ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (Nucleoside diphosphate- linked moiety X motif 9) (Nudix motif 9). [Source:Uniprot/SWISSPROT;Acc:Q9BW91]
15.9691 -23.12 0.0000434017 522 18 3 33 [+] picture button
ZNF291 ENSGALT00000004548 Zinc finger protein 291. [Source:Uniprot/SWISSPROT;Acc:Q9BY12]
17.7616 -22.47 0.0000453329 239 12 5 28 [+] picture button
AKR_CHICK ENSGALT00000023884 Homeobox protein AKR (Avian knotted-related protein). [Source:Uniprot/SWISSPROT;Acc:Q90655]
16.6303 -13.93 0.0000454263 275 11 7 20 [+] picture button
NP_001033675.1 ENSGALT00000037018 glutamate-ammonia ligase (glutamine synthase) domain containing 1 [Source:RefSeq_peptide;Acc:NP_001033675]
16.4041 -14.75 0.0000582427 86 4 4 8 [+] picture button
TTC1 ENSGALT00000002177 Tetratricopeptide repeat protein 1 (TPR repeat protein 1). [Source:Uniprot/SWISSPROT;Acc:Q99614]
15.8423 -11.89 0.0000582634 496 17 2 33 [+] picture button
DTD1 ENSGALT00000014317 Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q8TEA8]
16.4693 -18.72 0.0000755431 417 13 4 27 [+] picture button
CKAP4 ENSGALT00000020663 Cytoskeleton-associated protein 4 (63 kDa membrane protein) (p63). [Source:Uniprot/SWISSPROT;Acc:Q07065]
16.0894 -14.49 0.0000762598 600 15 1 21 [+] picture button
DENR_CHICK ENSGALT00000006020 Density-regulated protein (DRP). [Source:Uniprot/SWISSPROT;Acc:Q5ZJ39]
16.4383 -22.28 0.0000823897 322 13 5 23 [+] picture button
GBA2 ENSGALT00000003796 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HCG7]
16.1601 -20.74 0.0000878444 388 16 5 37 [+] picture button
HPS4 ENSGALT00000008976 Hermansky-Pudlak syndrome 4 protein (Light-ear protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q9NQG7]
16.4041 -19.97 0.0000902734 156 7 1 19 [+] picture button
Q90716_CHICK ENSGALT00000019661 Ankyrin 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90716]
15.8456 -12.11 0.00009433 339 14 2 33 [+] picture button
XPO6 ENSGALT00000004283 Exportin-6 (Exp6) (Ran-binding protein 20). [Source:Uniprot/SWISSPROT;Acc:Q96QU8]
17.6965 -18.94 0.0000958212 435 17 5 38 [+] picture button
TMCO7 ENSGALT00000000885 CDNA FLJ12688 fis, clone NT2RM4002534. [Source:Uniprot/SPTREMBL;Acc:Q9H9K1]
17.7616 -29.6 0.000101141 197 11 2 31 [+] picture button
NP_001020000.1 ENSGALT00000001612 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:RefSeq_peptide;Acc:NP_001020000]
18.0635 -27.69 0.000109829 403 18 1 41 [+] picture button
RAB20 ENSGALT00000027211 Ras-related protein Rab-20. [Source:Uniprot/SWISSPROT;Acc:Q9NX57]
16.8566 -24.41 0.000109889 117 5 2 10 [+] picture button
KIAA1772 ENSGALT00000024089 cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497]cDNA sequence AK220484 [Source:MarkerSymbol;Acc:MGI:3576497] BY ORTHOLOGY TO:ENSRNOT00000033468
17.099 -19.9 0.000111635 474 13 4 27 [+] picture button
SLC35D2 ENSGALT00000020616 solute carrier family 35, member D2 [Source:RefSeq_peptide;Acc:NP_008932]
16.4701 -16.47 0.000128515 600 9 2 15 [+] picture button
DHRS13 ENSGALT00000006386 dehydrogenase/reductase (SDR family) member 13 [Source:RefSeq_peptide;Acc:NP_653284]
16.4356 -17.33 0.000140918 600 17 2 23 [+] picture button
RSBN1L ENSGALT00000013555 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]
16.9946 -18.52 0.000148284 600 14 7 33 [+] picture button
NEUM_CHICK ENSGALT00000030455 Neuromodulin (Axonal membrane protein GAP-43) (Growth-associated protein 43). [Source:Uniprot/SWISSPROT;Acc:P35001]
16.2603 -21.64 0.000165758 600 15 2 23 [+] picture button
RELN_CHICK ENSGALT00000013344 Reelin (EC 3.4.21.-) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O93574]
16.0142 -17.93 0.000177014 576 15 6 25 [+] picture button
NP_001073911.1 ENSGALT00000005232 similar to amino acid transporter (LOC146167), mRNA [Source:RefSeq_dna;Acc:NM_001080442]
16.4701 -34.4 0.000183067 600 16 1 21 [+] picture button
CSE1L ENSGALT00000007499 Exportin-2 (Exp2) (Importin-alpha re-exporter) (Chromosome segregation 1-like protein) (Cellular apoptosis susceptibility protein). [Source:Uniprot/SWISSPROT;Acc:P55060]
16.7404 -27.04 0.000187482 438 15 2 28 [+] picture button
C6orf191 ENSGALT00000037419 Putative uncharacterized protein C6orf191. [Source:Uniprot/SWISSPROT;Acc:Q5VVB8]
16.2909 -18.23 0.000206991 292 10 2 22 [+] picture button
GUC1B_CHICK ENSGALT00000002160 Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B). [Source:Uniprot/SWISSPROT;Acc:P79881]
17.0592 -19.5 0.000210463 925 15 2 17 [+] picture button
C20orf96 ENSGALT00000033804 Uncharacterized protein C20orf96. [Source:Uniprot/SWISSPROT;Acc:Q9NUD7]
16.3198 -19.83 0.000210593 314 13 3 31 [+] picture button

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Download table: GFF TXT
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