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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and xtr-miR-106

789 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 SINFRUT00000133916 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
17.5582 -18.44 0.000000000183755 400 8 5 15 [+] picture button
BAMBI SINFRUT00000143916 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
17.2159 -16.9 0.00000000289649 400 5 13 14 [+] picture button
OBFC2A SINFRUT00000127690 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
18.7809 -22.4 0.00000000820896 400 5 2 11 [+] picture button
CLIP4 SINFRUT00000138713 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.0795 -10.42 0.0000000129349 400 6 9 17 [+] picture button
HS3ST5 SINFRUT00000153861 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
16.704 -10.45 0.0000000326774 400 6 2 13 [+] picture button
PRR16 SINFRUT00000162756 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]
18.3742 -20.71 0.0000000386629 400 10 11 18 [+] picture button
PDE3B SINFRUT00000149755 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
17.0538 -17 0.00000005635 400 6 11 11 [+] picture button
PTPN4 SINFRUT00000128597 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
17.4027 -18.68 0.0000000900708 400 6 4 13 [+] picture button
ZC3H12C SINFRUT00000132604 Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7]
16.9089 -17.4 0.000000142 400 6 3 8 [+] picture button
C11orf30 SINFRUT00000177248 Protein EMSY. [Source:Uniprot/SWISSPROT;Acc:Q7Z589]
17.5582 -16.72 0.00000018608 400 3 2 10 [+] picture button
Q96CK5_HUMAN SINFRUT00000163195 Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]"
17.1219 -13.89 0.000000516908 400 7 3 11 [+] picture button
TSG101 SINFRUT00000166265 Tumor susceptibility gene 101 protein. [Source:Uniprot/SWISSPROT;Acc:Q99816]
19.085 -16.45 0.000000531937 400 6 3 11 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
17.1845 -17.03 0.000000599924 400 5 10 10 [+] picture button
MTNR1A SINFRUT00000160445 Melatonin receptor type 1A (Mel-1A-R) (Mel1a melatonin receptor). [Source:Uniprot/SWISSPROT;Acc:P48039]
18.529 -21.83 0.000000813726 400 7 4 12 [+] picture button
FBXL5 SINFRUT00000130615 F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA1]
17.4326 -19.13 0.000000910042 400 7 4 12 [+] picture button
PLEKHB2 SINFRUT00000167190 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
18.6487 -18.65 0.000000915343 400 4 2 12 [+] picture button
APRIN (1 of 3) SINFRUT00000132946 androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847]
17.231 -19.4 0.000001 400 12 1 9 [+] picture button
DDEF2 SINFRUT00000136346 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
17.8853 -16.39 0.00000108311 400 5 2 12 [+] picture button
ARID4B SINFRUT00000148622 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
18.8669 -21.23 0.00000146541 400 4 11 10 [+] picture button
TNFRSF21 SINFRUT00000153994 Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509]
17.3401 -15.39 0.00000154939 400 6 2 13 [+] picture button
PERQ1 SINFRUT00000173231 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
17.0129 -20.27 0.00000191527 400 4 1 7 [+] picture button
ALAS2 SINFRUT00000181410 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
19.9574 -26.9 0.00000212053 400 5 3 15 [+] picture button
SRCRB4D SINFRUT00000176325 scavenger receptor cysteine rich domain containing, group B (4 domains) [Source:RefSeq_peptide;Acc:NP_542782]
19.5643 -18.23 0.00000231872 400 5 4 12 [+] picture button
RGMB SINFRUT00000148370 RGM domain family member B precursor. [Source:Uniprot/SWISSPROT;Acc:Q6NW40]
17.3832 -10.39 0.00000253943 400 8 2 18 [+] picture button
DERL2 SINFRUT00000145274 Derlin-2 (Degradation in endoplasmic reticulum protein 2) (Der1-like protein 2) (DERtrin-2) (F-LANa) (F-LAN-1). [Source:Uniprot/SWISSPROT;Acc:Q9GZP9]
16.9089 -13.76 0.0000028414 400 6 1 10 [+] picture button
SAR1B SINFRUT00000142224 GTP-binding protein SAR1b (GTBPB). [Source:Uniprot/SWISSPROT;Acc:Q9Y6B6]
16.5236 -12.46 0.00000284468 400 2 3 7 [+] picture button
WNT9A SINFRUT00000177356 Protein Wnt-9a precursor (Wnt-14). [Source:Uniprot/SWISSPROT;Acc:O14904]
18.028 -15.51 0.00000306375 400 6 5 14 [+] picture button
OSBPL5 SINFRUT00000148543 Oxysterol-binding protein-related protein 5 (OSBP-related protein 5) (ORP-5). [Source:Uniprot/SWISSPROT;Acc:Q9H0X9]
17.06 -17 0.00000372373 400 4 4 7 [+] picture button
Q8AV23_FUGRU SINFRUT00000160115 FZF2. [Source:Uniprot/SPTREMBL;Acc:Q8AV23]
16.8089 -12.27 0.00000401023 400 7 4 23 [+] picture button
SC4MOL SINFRUT00000160382 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q15800]
17.7763 -17.39 0.00000466374 400 2 3 10 [+] picture button
C6orf130 SINFRUT00000150467 Uncharacterized protein C6orf130. [Source:Uniprot/SWISSPROT;Acc:Q9Y530]
17.9944 -15.99 0.00000510219 400 5 3 11 [+] picture button
DAGLB SINFRUT00000148896 Sn1-specific diacylglycerol lipase beta (EC 3.1.1.-) (DGL-beta) (KCCR13L). [Source:Uniprot/SWISSPROT;Acc:Q8NCG7]
17.4491 -15.08 0.00000676144 400 8 2 10 [+] picture button
IRF2BP2 (1 of 2) SINFRUT00000147595 interferon regulatory factor 2 binding protein 2 isoform B [Source:RefSeq_peptide;Acc:NP_001070865]
17.8155 -20.99 0.00000729773 400 7 9 15 [+] picture button
SNAI2 SINFRUT00000129644 Zinc finger protein SLUG (Neural crest transcription factor Slug) (Snail homolog 2). [Source:Uniprot/SWISSPROT;Acc:O43623]
18.8829 -24.95 0.00000736149 400 6 4 15 [+] picture button
SINFRUT00000149706 Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]"
17.0204 -12.38 0.00000877531 400 5 3 14 [+] picture button
Q6E0H0_FUGRU SINFRUT00000180351 Wnt8.2 protein. [Source:Uniprot/SPTREMBL;Acc:Q6E0H0]
18.7578 -18.76 0.0000103575 400 4 3 12 [+] picture button
THEX1 SINFRUT00000160134 3' histone mRNA exonuclease 1 (EC 3.1.-.-) (3'-5' exonuclease ERI1) (Eri-1 homolog) (Histone mRNA 3' end-specific exoribonuclease) (Protein 3'hExo) (HEXO). [Source:Uniprot/SWISSPROT;Acc:Q8IV48]
16.965 -14.16 0.0000104114 400 3 2 9 [+] picture button
TBX3 SINFRUT00000140299 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
16.8893 -11.23 0.0000121489 400 5 4 10 [+] picture button
BICC1 SINFRUT00000179619 Protein bicaudal C homolog 1 (Bic-C). [Source:Uniprot/SWISSPROT;Acc:Q9H694]
16.5767 -16.36 0.0000125296 400 8 4 15 [+] picture button
EMB SINFRUT00000156467 Embigin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6PCB8]
17.5582 -18.62 0.0000132101 400 8 1 14 [+] picture button
ANUBL1 SINFRUT00000149221 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
17.4925 -14.05 0.0000146782 400 6 3 14 [+] picture button
SINFRUT00000129950 Homolog of Danio rerio "Mitochondrial glycine cleavage system H protein [Source:IPI;Acc:IPI00511586]"
17.6672 -12.4 0.0000162176 400 7 3 15 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
17.3255 -16.82 0.00001875 400 3 7 11 [+] picture button
SLC19A2 SINFRUT00000146718 Thiamine transporter 1 (ThTr-1) (ThTr1) (Thiamine carrier 1) (TC1) (Solute carrier family 19 member 2). [Source:Uniprot/SWISSPROT;Acc:O60779]
17.1219 -13.56 0.0000193464 400 4 2 8 [+] picture button
PKNOX1 SINFRUT00000169432 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
16.9058 -14.02 0.0000218825 400 5 4 7 [+] picture button
USP46 SINFRUT00000130570 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
17.6672 -24.69 0.0000221292 400 5 2 11 [+] picture button
TAF1L SINFRUT00000179507 Transcription initiation factor TFIID 210 kDa subunit (TBP-associated factor 210 kDa) (TAF(II)210) (TBP-associated factor 1-like). [Source:Uniprot/SWISSPROT;Acc:Q8IZX4]
17.9551 -15.91 0.000022197 400 6 2 10 [+] picture button
SINFRUT00000163302 PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436]PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436] BY ORTHOLOGY TO:ENSXETT00000030786
18.0341 -22.05 0.0000240373 400 6 3 13 [+] picture button
LRRC62 (2 of 2) SINFRUT00000172390 Leucine-rich repeat and fibronectin type-III domain-containing protein 6 precursor (Leucine-rich repeat-containing protein 62). [Source:Uniprot/SWISSPROT;Acc:Q5R3F8]
19.194 -24.21 0.0000245472 400 7 4 13 [+] picture button
DDX20 SINFRUT00000144075 Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-) (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3). [Source:Uniprot/SWISSPROT;Acc:Q9UHI6]
17.3401 -14.86 0.0000263381 400 5 4 9 [+] picture button

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Download table: GFF TXT
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