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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-27c

879 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PDE3B SINFRUT00000149755 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
18.2089 -18.63 0.0000000000261536 400 6 11 11 [+] picture button
ADORA2B SINFRUT00000154463 Adenosine A2b receptor. [Source:Uniprot/SWISSPROT;Acc:P29275]
16.6375 -15.14 0.000000000822336 400 7 4 11 [+] picture button
C1orf144 (1 of 2) SINFRUT00000167574 putative MAPK activating protein PM20,PM21 [Source:RefSeq_peptide;Acc:NP_056424]
16.7049 -15.39 0.0000000144108 400 7 2 9 [+] picture button
DCUN1D4 SINFRUT00000130578 DCN1-like protein 4 (Defective in cullin neddylation protein 1-like protein 4) (DCUN1 domain-containing protein 4). [Source:Uniprot/SWISSPROT;Acc:Q92564]
16.8216 -13.19 0.0000000308778 400 9 4 11 [+] picture button
Q9YI74_FUGRU SINFRUT00000129116 Serine/threonine phosphatase. [Source:Uniprot/SPTREMBL;Acc:Q9YI74]
18.5961 -21.84 0.0000000646458 400 3 2 5 [+] picture button
PDIA5 SINFRUT00000170433 Protein disulfide-isomerase A5 precursor (EC 5.3.4.1) (Protein disulfide isomerase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q14554]
16.6687 -12.49 0.0000000810043 400 6 10 12 [+] picture button
ISL1 SINFRUT00000164660 Insulin gene enhancer protein ISL-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P61371]
19.8256 -19.36 0.000000403334 400 4 12 5 [+] picture button
NP_835227.1 SINFRUT00000138207 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
17.5963 -17.79 0.000000473513 400 6 5 9 [+] picture button
EYA1 SINFRUT00000150907 Eyes absent homolog 1 (EC 3.1.3.48). [Source:Uniprot/SWISSPROT;Acc:Q99502]
18.0794 -16.66 0.000000490753 400 5 2 9 [+] picture button
STX5 SINFRUT00000133510 Syntaxin-5. [Source:Uniprot/SWISSPROT;Acc:Q13190]
18.2603 -17.96 0.000000644938 400 3 2 3 [+] picture button
SINFRUT00000182933 Homolog of Homo sapiens "CDK5 and ABL1 enzyme substrate 2 [Source:IPI;Acc:IPI00030512]"
17.5963 -17.46 0.000001 400 12 1 5 [+] picture button
C18orf55 SINFRUT00000133188 TIM21-like protein, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BVV7]
16.8216 -17.4 0.00000168845 400 10 2 15 [+] picture button
USP19 SINFRUT00000140147 Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15) (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O94966]
16.5266 -16.98 0.00000294587 400 5 1 6 [+] picture button
SINFRUT00000141857 Homolog of Homo sapiens "Y+L amino acid transporter 1 [Source:IPI;Acc:IPI00549477]"
18.7609 -20.95 0.00000477934 400 6 2 11 [+] picture button
NOMO1_HUMAN SINFRUT00000144844 Nodal modulator 1 precursor (pM5). [Source:Uniprot/SWISSPROT;Acc:Q15155]
17.4856 -15.82 0.00000492954 400 4 2 5 [+] picture button
C8orf33 SINFRUT00000172186 Uncharacterized protein C8orf33. [Source:Uniprot/SPTREMBL;Acc:Q9H7E9]
16.6375 -14.88 0.00000678842 400 4 2 5 [+] picture button
RFX2 SINFRUT00000136651 DNA-binding protein RFX2. [Source:Uniprot/SWISSPROT;Acc:P48378]
17.4093 -12.28 0.00000685886 400 5 5 10 [+] picture button
FAIM SINFRUT00000127719 Fas apoptotic inhibitory molecule 1. [Source:Uniprot/SWISSPROT;Acc:Q9NVQ4]
16.4896 -14.69 0.00000696164 400 6 2 6 [+] picture button
SLC35E4 SINFRUT00000165609 solute carrier family 35, member E4 [Source:RefSeq_peptide;Acc:NP_001001479]
17.707 -21.51 0.00000764024 400 5 4 5 [+] picture button
FZD3 (1 of 2) SINFRUT00000150170 Frizzled-3 precursor (Fz-3) (hFz3). [Source:Uniprot/SWISSPROT;Acc:Q9NPG1]
16.6003 -15.28 0.00000766539 400 8 1 9 [+] picture button
EDD1 SINFRUT00000147895 E3 ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein). [Source:Uniprot/SWISSPROT;Acc:O95071]
16.7397 -16.36 0.0000093335 400 8 8 13 [+] picture button
DTX4 SINFRUT00000181472 Protein deltex-4 (Deltex-4) (Deltex4) (RING finger protein 155). [Source:Uniprot/SWISSPROT;Acc:Q9Y2E6]
16.4896 -21.24 0.00000941931 400 6 5 11 [+] picture button
ECE2 SINFRUT00000151424 Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2). [Source:Uniprot/SWISSPROT;Acc:O60344]
16.5313 -14.65 0.0000102601 400 6 6 10 [+] picture button
SEC63 SINFRUT00000175469 Translocation protein SEC63 homolog. [Source:Uniprot/SWISSPROT;Acc:Q9UGP8]
17.6407 -21.21 0.0000103901 400 4 3 4 [+] picture button
NGFR SINFRUT00000145033 Tumor necrosis factor receptor superfamily member 16 precursor (Low- affinity nerve growth factor receptor) (NGF receptor) (Gp80-LNGFR) (p75 ICD) (Low affinity neurotrophin receptor p75NTR) (CD271 antigen). [Source:Uniprot/SWISSPROT;Acc:P08138]
16.8216 -19.01 0.0000110052 400 4 1 5 [+] picture button
CACNG3 SINFRUT00000141844 Voltage-dependent calcium channel gamma-3 subunit (Neuronal voltage- gated calcium channel gamma-3 subunit). [Source:Uniprot/SWISSPROT;Acc:O60359]
16.9799 -15.18 0.0000118734 400 8 3 9 [+] picture button
FAM125B SINFRUT00000131713 Protein FAM125B. [Source:Uniprot/SWISSPROT;Acc:Q9H7P6]
17.1536 -17.3 0.0000121854 400 4 1 5 [+] picture button
ICHN_HUMAN SINFRUT00000176033 Ichthyin. [Source:Uniprot/SWISSPROT;Acc:Q0D2K0]
18.5923 -18.67 0.0000123395 400 3 2 9 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
17.6932 -19.77 0.0000132607 400 9 5 9 [+] picture button
Q8QGY4_FUGRU SINFRUT00000168184 G protein alpha subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8QGY4]
16.4485 -14.75 0.0000160778 400 4 2 4 [+] picture button
LYCAT SINFRUT00000149462 lysocardiolipin acyltransferase isoform 1 [Source:RefSeq_peptide;Acc:NP_872357]
16.4896 -20.64 0.000016267 400 8 2 13 [+] picture button
C9orf121 SINFRUT00000143748 Thioredoxin domain-containing protein C9orf121. [Source:Uniprot/SWISSPROT;Acc:Q5VZ03]
18.1903 -24.59 0.0000166924 400 8 3 12 [+] picture button
YES1 (2 of 2) SINFRUT00000162021 Proto-oncogene tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes) (c- Yes). [Source:Uniprot/SWISSPROT;Acc:P07947]
17.3782 -15.65 0.000017729 400 3 2 5 [+] picture button
DUSP10 (2 of 2) SINFRUT00000138838 Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC 3.1.3.16) (Mitogen-activated protein kinase phosphatase 5) (MAP kinase phosphatase 5) (MKP-5). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W6]
17.8576 -18 0.0000199325 400 7 5 17 [+] picture button
CRSP7 (1 of 2) SINFRUT00000176975 CRSP complex subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 7) (Transcriptional coactivator CRSP70) (Activator- recruited cofactor 70 kDa component) (ARC70). [Source:Uniprot/SWISSPROT;Acc:O95402]
18.2603 -20.27 0.0000201435 400 3 5 5 [+] picture button
FAM76B SINFRUT00000174169 Protein FAM76B. [Source:Uniprot/SWISSPROT;Acc:Q5HYJ3]
17.6762 -15.75 0.0000202348 400 6 3 6 [+] picture button
ADA SINFRUT00000132497 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:P00813]
18.8137 -24.63 0.0000211195 400 8 5 10 [+] picture button
NGB SINFRUT00000152742 Neuroglobin. [Source:Uniprot/SWISSPROT;Acc:Q9NPG2]
16.9323 -13.52 0.0000227458 400 7 3 8 [+] picture button
SINFRUT00000155069 Homolog of Homo sapiens "Myosin IC [Source:IPI;Acc:IPI00419779]"
18.8208 -22.84 0.0000285508 400 3 4 7 [+] picture button
C1GALT1C1 SINFRUT00000133214 C1GALT1-specific chaperone 1 [Source:RefSeq_peptide;Acc:NP_689905]
19.1381 -26.76 0.0000289445 400 7 1 8 [+] picture button
EM55_FUGRU SINFRUT00000138881 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1). [Source:Uniprot/SWISSPROT;Acc:P49697]
17.375 -14.75 0.0000289612 400 9 4 12 [+] picture button
PTGES SINFRUT00000158509 Prostaglandin E synthase (EC 5.3.99.3) (Microsomal glutathione S- transferase 1-like 1) (MGST1-L1) (p53-induced apoptosis protein 12). [Source:Uniprot/SWISSPROT;Acc:O14684]
18.4517 -22.45 0.0000296942 400 6 2 11 [+] picture button
CIB3 SINFRUT00000144399 Calcium and integrin-binding protein 3 (Kinase-interacting protein 3) (KIP 3). [Source:Uniprot/SWISSPROT;Acc:Q96Q77]
16.6422 -17.43 0.0000299551 400 3 2 8 [+] picture button
O42504_FUGRU SINFRUT00000155461 Homeobox protein HOXC-6. [Source:Uniprot/SPTREMBL;Acc:O42504]
17.1913 -15.1 0.0000303546 400 6 6 11 [+] picture button
KIF1B SINFRUT00000146057 Kinesin-like protein KIF1B (Klp). [Source:Uniprot/SWISSPROT;Acc:O60333]
17.356 -18.11 0.0000319734 400 5 4 5 [+] picture button
PTX3 SINFRUT00000164125 Pentraxin-related protein PTX3 precursor (Pentaxin-related protein PTX3) (Tumor necrosis factor-inducible protein TSG-14). [Source:Uniprot/SWISSPROT;Acc:P26022]
19.4777 -24.24 0.0000324521 400 7 3 8 [+] picture button
PREP SINFRUT00000134435 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.6003 -16.83 0.0000344806 400 6 2 7 [+] picture button
CJ057_HUMAN SINFRUT00000137984 Uncharacterized protein C10orf57. [Source:Uniprot/SWISSPROT;Acc:Q8TBM7]
19.035 -17.52 0.0000362256 400 9 2 15 [+] picture button
RPS6KA4 SINFRUT00000182175 Ribosomal protein S6 kinase alpha-4 (EC 2.7.11.1) (Nuclear mitogen- and stress-activated protein kinase 2) (90 kDa ribosomal protein S6 kinase 4) (Ribosomal protein kinase B) (RSKB). [Source:Uniprot/SWISSPROT;Acc:O75676]
18.9061 -26.78 0.0000400914 400 7 6 10 [+] picture button
METTL9 SINFRUT00000136042 methyltransferase like 9 isoform 1 [Source:RefSeq_peptide;Acc:NP_057109]
17.1536 -13.76 0.0000436719 400 6 1 9 [+] picture button

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Download table: GFF TXT
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