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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-190

636 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ATP5B SINFRUT00000159323 ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14). [Source:Uniprot/SWISSPROT;Acc:P06576]
19.2678 -18.78 0.000000337493 400 6 4 10 [+] picture button
GTPBP10 SINFRUT00000161109 claudin 12 isoform 1 [Source:RefSeq_peptide;Acc:NP_001036182]
17.3961 -14.03 0.0000014786 400 2 2 2 [+] picture button
TNRC6A SINFRUT00000143627 Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDV7]
17.1527 -12.69 0.00000228128 400 8 12 10 [+] picture button
C1orf27 SINFRUT00000180450 Uncharacterized protein C1orf27 (Odorant response abnormal 4 protein) (LAG1-interacting protein). [Source:Uniprot/SPTREMBL;Acc:Q5SWX8]
17.4349 -15.71 0.00000306416 400 8 1 10 [+] picture button
MYO5B SINFRUT00000174873 Myosin-Vb. [Source:Uniprot/SWISSPROT;Acc:Q9ULV0]
16.5153 -16.23 0.00000576346 400 3 1 3 [+] picture button
GPR3 SINFRUT00000160201 Probable G-protein coupled receptor 3 (ACCA orphan receptor). [Source:Uniprot/SWISSPROT;Acc:P46089]
18.4351 -15.23 0.0000059096 400 8 4 16 [+] picture button
FBXL7 SINFRUT00000140108 F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat protein 7) (F-box protein FBL6/FBL7). [Source:Uniprot/SWISSPROT;Acc:Q9UJT9]
16.8453 -14.94 0.00000690075 400 8 3 16 [+] picture button
SNX5 SINFRUT00000148506 Sorting nexin-5. [Source:Uniprot/SWISSPROT;Acc:Q9Y5X3]
16.5153 -7.76 0.00000700241 400 5 3 5 [+] picture button
SACS SINFRUT00000167876 Sacsin. [Source:Uniprot/SWISSPROT;Acc:Q9NZJ4]
16.6254 -10.8 0.00000722161 400 7 5 11 [+] picture button
LRRC7 SINFRUT00000128751 Leucine-rich repeat-containing protein 7 (Protein LAP1) (Densin-180). [Source:Uniprot/SWISSPROT;Acc:Q96NW7]
17.9289 -11.24 0.00000736126 400 7 8 8 [+] picture button
GPHN (1 of 2) SINFRUT00000145984 Gephyrin. [Source:Uniprot/SWISSPROT;Acc:Q9NQX3]
17.1814 -12.59 0.00000912135 400 4 11 6 [+] picture button
HELZ SINFRUT00000132943 Probable helicase with zinc-finger domain (EC 3.6.1.-). [Source:Uniprot/SWISSPROT;Acc:P42694]
16.8281 -16.25 0.0000101452 400 7 5 9 [+] picture button
MAPK15 SINFRUT00000163341 Mitogen-activated protein kinase 15 (EC 2.7.11.24) (Extracellular signal-regulated kinase 8). [Source:Uniprot/SWISSPROT;Acc:Q8TD08]
17.2988 -17.31 0.000011021 400 4 4 4 [+] picture button
TMEM128 SINFRUT00000138682 Transmembrane protein 128. [Source:Uniprot/SWISSPROT;Acc:Q5BJH2]
16.8879 -13.11 0.0000122981 400 6 1 7 [+] picture button
KIF13A SINFRUT00000145252 Kinesin-like protein KIF13A (Kinesin-like protein RBKIN). [Source:Uniprot/SWISSPROT;Acc:Q9H1H9]
17.848 -11.82 0.0000124169 400 5 4 7 [+] picture button
SINFRUT00000182939 NOT ANNOTATED
17.3961 -13.58 0.0000151568 400 15 1 5 [+] picture button
BDNF SINFRUT00000151386 Brain-derived neurotrophic factor precursor (BDNF) (Abrineurin). [Source:Uniprot/SWISSPROT;Acc:P23560]
17.8906 -12.86 0.0000156971 400 6 9 12 [+] picture button
CABP2 SINFRUT00000153322 Calcium-binding protein 2 (CaBP2). [Source:Uniprot/SWISSPROT;Acc:Q9NPB3]
17.7215 -11.29 0.0000159787 400 4 2 5 [+] picture button
SINFRUT00000133157 Homolog of Homo sapiens "OTTHUMP00000021174 [Source:IPI;Acc:IPI00001120]"
17.9222 -13.01 0.0000160438 400 3 2 3 [+] picture button
ARSK SINFRUT00000140439 Arylsulfatase K precursor (EC 3.1.6.-) (ASK) (Telethon sulfatase). [Source:Uniprot/SWISSPROT;Acc:Q6UWY0]
17.286 -13.7 0.0000176329 400 7 2 8 [+] picture button
NP_981951.1 SINFRUT00000164893 similar to metallo-beta-lactamase superfamily protein [Source:RefSeq_peptide;Acc:NP_981951]
16.7728 -13.57 0.0000268972 400 8 3 13 [+] picture button
USP13 SINFRUT00000167340 Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) (Isopeptidase T-3) (ISOT-3). [Source:Uniprot/SWISSPROT;Acc:Q92995]
17.5062 -12.92 0.0000346534 400 2 4 5 [+] picture button
KCNC4 SINFRUT00000135352 Potassium voltage-gated channel subfamily C member 4 (Voltage-gated potassium channel subunit Kv3.4) (KSHIIIC). [Source:Uniprot/SWISSPROT;Acc:Q03721]
17.8365 -14.15 0.0000435147 400 6 2 9 [+] picture button
F2R SINFRUT00000183082 Proteinase-activated receptor 1 precursor (PAR-1) (Thrombin receptor) (Coagulation factor II receptor). [Source:Uniprot/SWISSPROT;Acc:P25116]
16.7355 -10.7 0.0000473668 400 7 2 14 [+] picture button
CRYGS SINFRUT00000158546 Beta crystallin S (Gamma crystallin S). [Source:Uniprot/SWISSPROT;Acc:P22914]
16.7355 -12.73 0.0000552045 400 5 2 11 [+] picture button
C14orf28 SINFRUT00000145064 Uncharacterized protein C14orf28 (Dopamine receptor-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q4W4Y0]
16.6254 -11.08 0.0000592669 400 4 2 4 [+] picture button
TRPA1 SINFRUT00000169072 Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation sensitive-protein p120). [Source:Uniprot/SWISSPROT;Acc:O75762]
16.5153 -11.48 0.0000593795 400 6 2 7 [+] picture button
CNN2 SINFRUT00000146236 Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin). [Source:Uniprot/SWISSPROT;Acc:Q99439]
18.7173 -15.7 0.0000608099 400 8 3 8 [+] picture button
C6orf57 SINFRUT00000180412 UPF0369 protein C6orf57 precursor. [Source:Uniprot/SWISSPROT;Acc:Q5VUM1]
16.6633 -10.75 0.0000700654 400 8 2 16 [+] picture button
C1orf59 SINFRUT00000157426 Uncharacterized protein C1orf59. [Source:Uniprot/SPTREMBL;Acc:Q5T8I9]
17.286 -13.99 0.0000712346 400 5 1 7 [+] picture button
DCN SINFRUT00000160754 Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40). [Source:Uniprot/SWISSPROT;Acc:P07585]
17.1677 -13.43 0.0000734541 400 3 2 4 [+] picture button
VASH1 SINFRUT00000141285 Vasohibin-1. [Source:Uniprot/SWISSPROT;Acc:Q7L8A9]
18.8236 -17.35 0.0000884161 400 5 2 10 [+] picture button
DAGLA SINFRUT00000176670 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
18.0567 -11.89 0.0000987302 400 3 4 3 [+] picture button
SINFRUT00000134898 CDNA FLJ36874 fis, clone ASTRO2018169, weakly similar to Oocyte- specific protein P100 (FLJ36874 protein). [Source:Uniprot/SPTREMBL;Acc:Q8N9M6]CDNA FLJ36874 fis, clone ASTRO2018169, weakly similar to Oocyte- specific protein P100 (FLJ36874 protein). [Source:Uniprot/SPTREMBL;Acc:Q8N9M6] BY ORTHOLOGY TO:ENSGACT00000021761
18.263 -12.01 0.00010092 400 6 2 11 [+] picture button
MFI2 SINFRUT00000128773 Melanotransferrin precursor (Melanoma-associated antigen p97) (CD228 antigen). [Source:Uniprot/SWISSPROT;Acc:P08582]
17.6163 -13.09 0.000120996 400 3 2 3 [+] picture button
Q5TIE3_HUMAN SINFRUT00000131381 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5TIE3]
18.2769 -17.27 0.00013152 400 10 3 13 [+] picture button
CYP26A1 SINFRUT00000140036 Cytochrome P450 26A1 (EC 1.14.-.-) (Retinoic acid-metabolizing cytochrome) (P450 retinoic acid-inactivating 1) (P450RAI) (hP450RAI) (Retinoic acid 4-hydroxylase). [Source:Uniprot/SWISSPROT;Acc:O43174]
16.5073 -13.78 0.000131723 400 6 3 9 [+] picture button
PSMC1 SINFRUT00000171244 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1). [Source:Uniprot/SWISSPROT;Acc:P62191]
17.3961 -19.29 0.000139029 400 3 5 4 [+] picture button
SMAP1 SINFRUT00000147143 Stromal membrane-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8IYB5]
18.1925 -15.44 0.000143066 400 7 4 7 [+] picture button
PITX2 SINFRUT00000164946 Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1). [Source:Uniprot/SWISSPROT;Acc:Q99697]
17.133 -11.23 0.000145953 400 6 3 6 [+] picture button
GLMN (1 of 2) SINFRUT00000135601 Glomulin (FKBP-associated protein) (FK506-binding protein-associated protein) (FAP). [Source:Uniprot/SWISSPROT;Acc:Q92990]
17.9466 -21.03 0.000176029 400 6 2 6 [+] picture button
BAI3 SINFRUT00000129349 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
16.9227 -12.51 0.000189683 400 6 10 13 [+] picture button
SMPDL3B SINFRUT00000150795 Acid sphingomyelinase-like phosphodiesterase 3b precursor (EC 3.1.4.-) (ASM-like phosphodiesterase 3b). [Source:Uniprot/SWISSPROT;Acc:Q92485]
17.0658 -19.57 0.000191084 400 7 3 10 [+] picture button
RRAGB SINFRUT00000150511 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
16.7716 -10.52 0.000191214 400 10 3 21 [+] picture button
Q8QFR8_FUGRU SINFRUT00000156829 Gfg protein. [Source:Uniprot/SPTREMBL;Acc:Q8QFR8]
17.1759 -12.32 0.000215541 400 5 2 7 [+] picture button
SINFRUT00000139971 Homolog of Homo sapiens "PREDICTED "similar to RIKEN cDNA 2700097O09 [Source:IPI;Acc:IPI00457121]"
18.1592 -12.41 0.000218023 400 2 1 2 [+] picture button
LEO1 SINFRUT00000165308 RNA polymerase-associated protein LEO1 (Replicative senescence down- regulated leo1-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WVC0]
17.1076 -9.05 0.000245038 400 5 2 9 [+] picture button
FBN1 SINFRUT00000178382 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]
18.2124 -13.27 0.000261556 400 4 4 3 [+] picture button
Q6ZYN9_FUGRU SINFRUT00000158720 Alpha-2,6-sialyltransferase ST6GalNAc III (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6ZYN9]
17.6163 -16.8 0.000265493 400 7 2 8 [+] picture button
PPCS SINFRUT00000147336 Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosphopantothenoylcysteine synthetase) (PPC synthetase). [Source:Uniprot/SWISSPROT;Acc:Q9HAB8]
17.6163 -13.34 0.00027353 400 8 3 10 [+] picture button

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Download table: GFF TXT
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