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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-181b

991 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
18.7671 -23.05 0.000000000000199162 400 4 12 5 [+] picture button
BHLHB2 (1 of 2) SINFRUT00000151465 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
19.8098 -26.18 0.000000000967426 400 6 4 9 [+] picture button
TMEM64 SINFRUT00000182242 transmembrane protein 64 [Source:RefSeq_peptide;Acc:NP_001008495]
17.5258 -13.08 0.000000016547 400 10 5 14 [+] picture button
PLEKHA3 SINFRUT00000151930 Pleckstrin homology domain-containing family A member 3 (Phosphoinositol 4-phosphate adaptor protein 1) (FAPP-1). [Source:Uniprot/SWISSPROT;Acc:Q9HB20]
17.5062 -13.44 0.000000103973 400 5 2 4 [+] picture button
BHLHB2 (2 of 2) SINFRUT00000141506 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
17.9466 -18.57 0.000000130686 400 7 4 11 [+] picture button
TMED4 SINFRUT00000154213 Transmembrane emp24 domain-containing protein 4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q7Z7H5]
17.286 -13.82 0.000000374301 400 6 1 5 [+] picture button
SINFRUT00000179419 Homolog of Homo sapiens "PREDICTED "similar to MGC52970 protein [Source:IPI;Acc:IPI00397872]"
17.7377 -18.58 0.000001 400 5 1 2 [+] picture button
FBXO9 SINFRUT00000164404 F-box only protein 9 (Cross-immune reaction antigen 1) (Renal carcinoma antigen NY-REN-57). [Source:Uniprot/SWISSPROT;Acc:Q9UK97]
19.3779 -22.75 0.00000121158 400 7 4 9 [+] picture button
TYW1 SINFRUT00000178264 tRNA wybutosine-synthesizing protein 1 homolog A (Radical S-adenosyl methionine and flavodoxin domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9NV66]
17.0658 -14.35 0.00000121444 400 8 2 11 [+] picture button
GAD2 SINFRUT00000129597 Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate decarboxylase 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q05329]
17.8219 -13.82 0.00000124709 400 4 3 8 [+] picture button
DHX29 SINFRUT00000143723 Putative ATP-dependent RNA helicase DHX29 (EC 3.6.1.-) (DEAH box protein 29) (Nucleic acid helicase DDXx). [Source:Uniprot/SWISSPROT;Acc:Q7Z478]
16.6254 -17.99 0.00000297582 400 7 9 8 [+] picture button
Q4AE30_FUGRU SINFRUT00000136921 DMRT3 protein. [Source:Uniprot/SPTREMBL;Acc:Q4AE30]
18.387 -21.03 0.00000331194 400 2 1 6 [+] picture button
SESN2 SINFRUT00000160207 Sestrin-2 (Hi95). [Source:Uniprot/SWISSPROT;Acc:P58004]
18.1668 -19.48 0.00000392003 400 8 2 13 [+] picture button
HECA SINFRUT00000167545 Headcase protein homolog (hHDC). [Source:Uniprot/SWISSPROT;Acc:Q9UBI9]
17.1759 -16.51 0.00000484955 400 4 2 5 [+] picture button
NP_001027770.1 SINFRUT00000178701 Fn5 protein [Source:RefSeq_peptide;Acc:NP_001027770]
17.8365 -20.89 0.0000052643 400 4 2 8 [+] picture button
SINFRUT00000181298 NOT ANNOTATED
17.8116 -15.2 0.00000546711 400 5 2 5 [+] picture button
CARM1 SINFRUT00000156311 Histone-arginine methyltransferase CARM1 (EC 2.1.1.125) (EC 2.1.1.-) (Protein arginine N-methyltransferase 4) (Coactivator-associated arginine methyltransferase 1). [Source:Uniprot/SWISSPROT;Acc:Q86X55]
16.8456 -14.06 0.00000628528 400 5 2 6 [+] picture button
CANT1 (1 of 2) SINFRUT00000143361 Soluble calcium-activated nucleotidase 1 (EC 3.6.1.6) (SCAN-1) (Apyrase homolog) (Putative NF-kappa-B-activating protein 107) (Putative MAPK-activating protein PM09). [Source:Uniprot/SWISSPROT;Acc:Q8WVQ1]
17.8585 -14.41 0.00000656639 400 5 4 8 [+] picture button
NARG2 SINFRUT00000179845 NMDA receptor regulated 2 isoform a [Source:RefSeq_peptide;Acc:NP_078887]
17.3961 -17.28 0.0000066508 400 7 2 7 [+] picture button
IKBKG (1 of 2) SINFRUT00000178390 NF-kappa-B essential modulator (NEMO) (NF-kappa-B essential modifier) (Inhibitor of nuclear factor kappa-B kinase subunit gamma) (IkB kinase subunit gamma) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) (IKKAP1) (FIP-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K9]
17.354 -13.45 0.000006821 400 7 3 11 [+] picture button
HIC2 SINFRUT00000149261 Hypermethylated in cancer 2 protein (Hic-2) (Hic-3) (HIC1-related gene on chromosome 22) (Zinc finger and BTB domain-containing protein 30). [Source:Uniprot/SWISSPROT;Acc:Q96JB3]
16.7355 -12.39 0.000006974 400 4 3 7 [+] picture button
CETN3 SINFRUT00000169964 Centrin-3. [Source:Uniprot/SWISSPROT;Acc:O15182]
17.6163 -16.9 0.00000734726 400 8 6 13 [+] picture button
WEE1 SINFRUT00000136340 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
16.6254 -18.29 0.00000764698 400 6 2 12 [+] picture button
GLT8D4 SINFRUT00000145880 glycosyltransferase 8 domain containing 4 [Source:RefSeq_peptide;Acc:NP_001073862]
16.7355 -18.41 0.00000836148 400 5 2 9 [+] picture button
MARK1 SINFRUT00000170848 Serine/threonine-protein kinase MARK1 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q9P0L2]
17.5062 -16.44 0.00000837116 400 5 4 12 [+] picture button
PLEK SINFRUT00000154171 Pleckstrin (Platelet p47 protein). [Source:Uniprot/SWISSPROT;Acc:P08567]
16.6254 -11.26 0.00000855248 400 3 1 3 [+] picture button
CHST13 SINFRUT00000156740 Carbohydrate sulfotransferase 13 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 3) (Chondroitin 4-sulfotransferase 3) (C4ST3) (C4ST- 3). [Source:Uniprot/SWISSPROT;Acc:Q8NET6]
17.1759 -14.44 0.00000911569 400 7 2 20 [+] picture button
NGLY1 SINFRUT00000139051 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (PNGase) (hPNGase) (Peptide:N-glycanase) (N-glycanase 1). [Source:Uniprot/SWISSPROT;Acc:Q96IV0]
17.0658 -20.87 0.0000110189 400 7 3 11 [+] picture button
C1orf82 SINFRUT00000135603 UPF0385 protein C1orf82. [Source:Uniprot/SWISSPROT;Acc:Q8IXW5]
16.5275 -24.52 0.0000123984 400 7 2 10 [+] picture button
NP_001073909.1 (1 of 2) SINFRUT00000152519 similar to otolin-1 (LOC131149), mRNA [Source:RefSeq_dna;Acc:NM_001080440]
18.1668 -16.05 0.000012902 400 3 2 3 [+] picture button
LMO1 SINFRUT00000172705 Rhombotin-1 (LIM domain only protein 1) (Cysteine-rich protein TTG-1) (T-cell translocation protein 1). [Source:Uniprot/SWISSPROT;Acc:P25800]
16.6307 -16.13 0.0000137253 400 4 6 5 [+] picture button
CGAT2_HUMAN SINFRUT00000131162 Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2 (EC 2.4.1.174) (GalNAcT-2) (beta4GalNAcT-2). [Source:Uniprot/SWISSPROT;Acc:Q8N6G5]
17.3961 -15.36 0.0000161664 400 9 3 10 [+] picture button
LRRIQ2 SINFRUT00000138063 Leucine-rich repeat and IQ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IW35]
17.3961 -12.77 0.0000162006 400 4 1 5 [+] picture button
VRK3 SINFRUT00000156545 Serine/threonine-protein kinase VRK3 (EC 2.7.11.1) (Vaccinia-related kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q8IV63]
16.6254 -12.7 0.0000169065 400 6 2 7 [+] picture button
CAMSAP1L1 (2 of 2) SINFRUT00000160444 calmodulin regulated spectrin-associated protein 1-like 1 [Source:RefSeq_peptide;Acc:NP_982284]
20.0385 -30.61 0.000018461 400 6 4 9 [+] picture button
SLC37A3 SINFRUT00000150830 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671]
17.7264 -24.52 0.0000225407 400 9 3 13 [+] picture button
SLC6A2 SINFRUT00000141211 Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET). [Source:Uniprot/SWISSPROT;Acc:P23975]
16.7355 -16.18 0.0000232601 400 7 2 12 [+] picture button
CTDSPL2 (1 of 2) SINFRUT00000132394 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:RefSeq_peptide;Acc:NP_057480]
19.0836 -20.23 0.0000241592 400 1 4 2 [+] picture button
IRS4 SINFRUT00000128710 insulin receptor substrate 4 [Source:RefSeq_peptide;Acc:NP_003595]
16.9412 -20.24 0.0000244036 400 5 2 6 [+] picture button
ATM SINFRUT00000141375 Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated) (A-T, mutated). [Source:Uniprot/SWISSPROT;Acc:Q13315]
17.5062 -16.59 0.000024424 400 4 1 4 [+] picture button
PGAM5 SINFRUT00000182237 Bcl-XL-binding protein v68 [Source:RefSeq_peptide;Acc:NP_612642]
16.7101 -16.06 0.0000267162 400 7 3 9 [+] picture button
LYAR_HUMAN SINFRUT00000138683 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q9NX58]
17.7264 -15.2 0.0000284584 400 5 3 8 [+] picture button
SINFRUT00000144475 Homolog of Brachydanio rerio "Zinc finger protein Zic6. [Source:Uniprot/SPTREMBL;Acc:Q6PWU7]"
18.0567 -18.97 0.0000317027 400 5 2 7 [+] picture button
BRD1 (1 of 2) SINFRUT00000150785 Bromodomain-containing protein 1 (BR140-like protein). [Source:Uniprot/SWISSPROT;Acc:O95696]
18.0276 -16.31 0.0000333381 400 5 3 7 [+] picture button
LPP SINFRUT00000128892 Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma). [Source:Uniprot/SWISSPROT;Acc:Q93052]
17.6419 -21.08 0.0000336343 400 5 2 6 [+] picture button
ALPK2 SINFRUT00000160476 Alpha-protein kinase 2 (EC 2.7.11.-) (Heart alpha-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q86TB3]
16.9412 -14.43 0.0000385468 400 4 4 7 [+] picture button
ADAMTS1 SINFRUT00000131505 ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). [Source:Uniprot/SWISSPROT;Acc:Q9UHI8]
18.3647 -19.29 0.0000397329 400 10 3 13 [+] picture button
FAAH2 SINFRUT00000176750 amidase domain containing [Source:RefSeq_peptide;Acc:NP_777572]
18.635 -19.99 0.0000403065 400 3 2 3 [+] picture button
MBIP SINFRUT00000182700 MAP3K12-binding inhibitory protein 1 (MAPK upstream kinase-binding inhibitory protein) (MUK-binding inhibitory protein). [Source:Uniprot/SWISSPROT;Acc:Q9NS73]
16.4052 -15.76 0.000042619 400 5 2 8 [+] picture button
DDR2 (1 of 2) SINFRUT00000181714 Discoidin domain-containing receptor 2 precursor (EC 2.7.10.1) (Discoidin domain receptor 2) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO 10) (Neurotrophic tyrosine kinase, receptor-related 3) (CD167b antigen). [Source:Uniprot/SWISSPROT;Acc:Q16832]
17.4266 -16.34 0.0000438272 400 3 4 5 [+] picture button

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Download table: GFF TXT
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