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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-137

770 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PRKAA1 SINFRUT00000146848 5'-AMP-activated protein kinase catalytic subunit alpha-1 (EC 2.7.11.1) (AMPK alpha-1 chain). [Source:Uniprot/SWISSPROT;Acc:Q13131]
19.5981 -18.78 0.00000000145587 400 5 8 9 [+] picture button
LBX1 (1 of 3) SINFRUT00000147148 Transcription factor LBX1 (Ladybird homeobox protein homolog 1). [Source:Uniprot/SWISSPROT;Acc:P52954]
16.4973 -7.4 0.0000000177516 400 3 13 4 [+] picture button
ARID4B SINFRUT00000148622 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
18.4971 -10.12 0.0000000398809 400 4 11 10 [+] picture button
NEUROD1 SINFRUT00000135738 Neurogenic differentiation factor 1 (NeuroD1) (NeuroD). [Source:Uniprot/SWISSPROT;Acc:Q13562]
16.185 -8.82 0.0000000896042 400 6 4 7 [+] picture button
FMNL2 SINFRUT00000142609 formin-like 2 [Source:RefSeq_peptide;Acc:NP_443137]
16.5153 -9.56 0.00000051696 400 8 3 9 [+] picture button
FGF11 (1 of 2) SINFRUT00000161808 Fibroblast growth factor 11 (FGF-11) (Fibroblast growth factor homologous factor 3) (FHF-3). [Source:Uniprot/SWISSPROT;Acc:Q92914]
16.8831 -9.22 0.000000565364 400 5 4 5 [+] picture button
PIAS2 SINFRUT00000130297 E3 SUMO-protein ligase PIAS2 (Protein inhibitor of activated STAT2) (Protein inhibitor of activated STAT x) (Msx-interacting zinc finger protein) (Miz1) (DAB2-interacting protein) (DIP) (Androgen receptor- interacting protein 3) (ARIP3) (PIAS-NY protein). [Source:Uniprot/SWISSPROT;Acc:O75928]
16.2951 -8.23 0.000000738164 400 6 2 8 [+] picture button
SLC12A2 (1 of 2) SINFRUT00000152905 Solute carrier family 12 member 2 (Bumetanide-sensitive sodium- (potassium)-chloride cotransporter 1) (Basolateral Na-K-Cl symporter). [Source:Uniprot/SWISSPROT;Acc:P55011]
18.6072 -20.43 0.000000998942 400 5 1 5 [+] picture button
SINFRUT00000183411 Homolog of Homo sapiens "PREDICTED "similar to mKIAA1114 protein [Source:IPI;Acc:IPI00454853]"
16.1459 -12.94 0.000001 400 7 1 2 [+] picture button
ITM2C (2 of 2) SINFRUT00000147258 Integral membrane protein 2C (Transmembrane protein BRI3) (Cerebral protein 14) [Contains: CT-BRI3]. [Source:Uniprot/SWISSPROT;Acc:Q9NQX7]
16.8456 -11.15 0.00000102192 400 4 5 4 [+] picture button
EM55_FUGRU SINFRUT00000138881 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1). [Source:Uniprot/SWISSPROT;Acc:P49697]
16.0749 -7.74 0.00000120785 400 9 4 12 [+] picture button
SINFRUT00000139202 Homolog of Brachydanio rerio "Protein kinase Bsk146. [Source:Uniprot/SPTREMBL;Acc:Q90ZY4]"
18.7173 -18.54 0.00000130259 400 4 3 6 [+] picture button
FOS_FUGRU SINFRUT00000140244 Proto-oncogene protein c-fos (Cellular oncogene fos). [Source:Uniprot/SWISSPROT;Acc:P53450]
16.9557 -12.58 0.00000298454 400 7 5 12 [+] picture button
C6orf137 (2 of 2) SINFRUT00000135552 Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7]
18.4971 -18.65 0.00000316458 400 6 4 12 [+] picture button
BTAF1 SINFRUT00000143763 TATA-binding protein-associated factor 172 (EC 3.6.1.-) (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B- TFIID transcription factor-associated 170 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O14981]
18.1805 -12.15 0.00000390075 400 6 2 9 [+] picture button
REXO1L6P SINFRUT00000157975 Homolog of Homo sapiens "transcription elongation factor B polypeptide 3 binding protein 1 [Source:RefSeq_peptide;Acc:NP_065746]"
16.9119 -9.36 0.00000487059 400 9 3 11 [+] picture button
FUBP3 (1 of 2) SINFRUT00000181629 Far upstream element-binding protein 3 (FUSE-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q96I24]
16.0749 -7.97 0.00000638368 400 5 3 5 [+] picture button
DZIP1 (1 of 8) SINFRUT00000167936 Zinc finger protein DZIP1 (DAZ-interacting protein 1/2). [Source:Uniprot/SWISSPROT;Acc:Q86YF9]
16.5153 -10.51 0.0000067503 400 6 2 9 [+] picture button
ATG4C SINFRUT00000134567 Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6]
16.221 -15.07 0.00000721949 400 8 2 9 [+] picture button
VPS25 SINFRUT00000138690 Vacuolar protein sorting-associated protein 25 (hVps25) (ELL- associated protein of 20 kDa) (Dermal papilla-derived protein 9). [Source:Uniprot/SWISSPROT;Acc:Q9BRG1]
16.4464 -10.18 0.00000751884 400 4 3 4 [+] picture button
UBE2A SINFRUT00000182705 Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19) (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (hHR6A). [Source:Uniprot/SWISSPROT;Acc:P49459]
17.8064 -20.19 0.00000876911 400 7 3 7 [+] picture button
Q68DK7_HUMAN SINFRUT00000140611 MSL-1 protein. [Source:Uniprot/SPTREMBL;Acc:Q0VF46]
18.2769 -13.57 0.00000979034 400 2 3 2 [+] picture button
NP_835227.1 SINFRUT00000138207 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
17.6163 -14.22 0.0000104465 400 6 5 9 [+] picture button
SMARCA4 (1 of 2) SINFRUT00000139269 Probable global transcription activator SNF2L4 (EC 3.6.1.-) (ATP- dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regulator [Source:Uniprot/SWISSPROT;Acc:P51532]
16.2951 -10.08 0.0000124384 400 6 2 6 [+] picture button
WDR24 SINFRUT00000146163 WD repeat protein 24. [Source:Uniprot/SWISSPROT;Acc:Q96S15]
17.1759 -9.51 0.0000128792 400 7 2 9 [+] picture button
ACPL2 SINFRUT00000157259 acid phosphatase-like 2 [Source:RefSeq_peptide;Acc:NP_689495]
16.5521 -15.05 0.0000129006 400 4 2 10 [+] picture button
Q6E5T7_FUGRU SINFRUT00000181837 Claudin 20a. [Source:Uniprot/SPTREMBL;Acc:Q6E5T7]
18.0485 -19.85 0.0000129377 400 3 4 4 [+] picture button
FAM54B SINFRUT00000157177 family with sequence similarity 54, member B (FAM54B), mRNA [Source:RefSeq_dna;Acc:NM_019557]
17.4447 -11.42 0.000014907 400 9 3 14 [+] picture button
EMB SINFRUT00000156467 Embigin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6PCB8]
16.4052 -7.7 0.0000152174 400 8 1 14 [+] picture button
VAMP8 SINFRUT00000153951 Vesicle-associated membrane protein 8 (VAMP-8) (Endobrevin) (EDB). [Source:Uniprot/SWISSPROT;Acc:Q9BV40]
15.8547 -12.02 0.0000158719 400 4 1 4 [+] picture button
SINFRUT00000151087 Homolog of Brachydanio rerio "LIM class homeodomain protein. [Source:Uniprot/SPTREMBL;Acc:O13106]"
17.7845 -11.78 0.0000180507 400 7 2 7 [+] picture button
SINFRUT00000175660 Homolog of Brachydanio rerio "Vimentin. [Source:Uniprot/SPTREMBL;Acc:Q6PBS2]"
18.387 -11.78 0.0000196695 400 7 4 5 [+] picture button
NIN SINFRUT00000143866 Ninein (hNinein) (Glycogen synthase kinase 3 beta-interacting protein) (GSK3B-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q8N4C6]
17.1759 -10.08 0.0000228133 400 3 1 4 [+] picture button
C5orf37 SINFRUT00000151249 Uncharacterized protein C5orf37. [Source:Uniprot/SWISSPROT;Acc:Q8NA72]
16.4052 -13.8 0.00002466 400 5 2 5 [+] picture button
PDE7A SINFRUT00000155216 High-affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A (EC 3.1.4.17) (HCP1) (TM22). [Source:Uniprot/SWISSPROT;Acc:Q13946]
16.0407 -12.34 0.0000270441 400 8 3 12 [+] picture button
SINFRUT00000179358 Homolog of Homo sapiens "Heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 [Source:UniGene;Acc:Hs.462270]"
17.6163 -15.25 0.0000276169 400 5 2 7 [+] picture button
NUDCD2 SINFRUT00000152433 NudC domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8WVJ2]
17.7659 -12.41 0.0000286437 400 6 2 6 [+] picture button
Q90XY2_FUGRU SINFRUT00000154154 3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2]
16.8456 -12.6 0.0000287509 400 6 3 9 [+] picture button
PADI3 SINFRUT00000134773 Protein-arginine deiminase type-3 (EC 3.5.3.15) (Protein-arginine deiminase type III) (Peptidylarginine deiminase III). [Source:Uniprot/SWISSPROT;Acc:Q9ULW8]
15.9648 -10.7 0.0000294596 400 5 1 6 [+] picture button
HELLS SINFRUT00000156551 Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9]
16.2951 -12.45 0.0000295055 400 8 2 10 [+] picture button
C9orf4 SINFRUT00000157146 Uncharacterized protein C9orf4 (Brain protein CG-6). [Source:Uniprot/SWISSPROT;Acc:Q9P0K9]
16.2718 -9.83 0.000034845 400 5 3 6 [+] picture button
SINFRUT00000154262 Homolog of Homo sapiens "Ectonucleotide pyrophosphatase/phosphodiesterase 7 precursor [Source:IPI;Acc:IPI00419668]"
16.1899 -12.31 0.0000348839 400 5 1 6 [+] picture button
PRICKLE1 SINFRUT00000171299 Prickle-like protein 1 (REST/NRSF-interacting LIM domain protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96MT3]
16.6254 -12.86 0.0000373545 400 5 2 6 [+] picture button
SYT1 (1 of 5) SINFRUT00000127020 Synaptotagmin-1 (Synaptotagmin I) (SytI) (p65). [Source:Uniprot/SWISSPROT;Acc:P21579]
18.2073 -11.31 0.0000393238 400 3 4 5 [+] picture button
CACNA1G SINFRUT00000156380 Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage- gated calcium channel subunit alpha Cav3.1) (Cav3.1c) (NBR13). [Source:Uniprot/SWISSPROT;Acc:O43497]
17.3961 -11.25 0.0000428898 400 4 1 6 [+] picture button
NP_073574.1 SINFRUT00000161666 lipid phosphate phosphatase-related protein type 2 [Source:RefSeq_peptide;Acc:NP_073574]
17.3961 -9.53 0.0000452462 400 5 4 6 [+] picture button
SINFRUT00000137657 Homolog of Homo sapiens "OTTHUMP00000059153 [Source:IPI;Acc:IPI00400923]"
16.7355 -15.2 0.0000459102 400 8 4 8 [+] picture button
NME3 SINFRUT00000159513 Nucleoside diphosphate kinase 3 (EC 2.7.4.6) (NDK 3) (NDP kinase 3) (Nucleoside diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23). [Source:Uniprot/SWISSPROT;Acc:Q13232]
16.7355 -9.52 0.0000484639 400 4 3 5 [+] picture button
LRRC52 (2 of 2) SINFRUT00000138531 Leucine-rich repeat-containing protein 52 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N7C0]
17.624 -9.1 0.0000602503 400 3 2 2 [+] picture button
OSGEP SINFRUT00000163227 Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57) (hOSGEP). [Source:Uniprot/SWISSPROT;Acc:Q9NPF4]
18.2594 -14.65 0.0000614004 400 5 3 6 [+] picture button

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Download table: GFF TXT
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