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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-133

788 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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INPP5E SINFRUT00000134401 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36) (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV). [Source:Uniprot/SWISSPROT;Acc:Q9NRR6]
19.0476 -22.42 0.0000000694137 400 5 3 8 [+] picture button
POU4F1 SINFRUT00000162286 POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1). [Source:Uniprot/SWISSPROT;Acc:Q01851]
17.624 -24.85 0.00000013706 400 1 1 1 [+] picture button
ANGPTL4 (2 of 2) SINFRUT00000171526 Angiopoietin-related protein 4 precursor (Angiopoietin-like 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP). [Source:Uniprot/SWISSPROT;Acc:Q9BY76]
16.4052 -13.65 0.000000137741 400 7 2 10 [+] picture button
SLC30A7 SINFRUT00000181872 zinc transporter like 2 [Source:RefSeq_peptide;Acc:NP_598003]
17.1428 -16.84 0.000000186844 400 6 3 6 [+] picture button
NM_001080452.1 SINFRUT00000169830 G protein-coupled receptor 108 (GPR108), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001080452]
15.7604 -18.08 0.000000200414 400 4 1 7 [+] picture button
PRKCSH SINFRUT00000147730 Glucosidase 2 subunit beta precursor (Glucosidase II subunit beta) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein). [Source:Uniprot/SWISSPROT;Acc:P14314]
16.185 -21.47 0.000000294636 400 5 2 7 [+] picture button
GRM5 (2 of 2) SINFRUT00000140545 Metabotropic glutamate receptor 5 precursor (mGluR5). [Source:Uniprot/SWISSPROT;Acc:P41594]
16.5153 -16.75 0.000000455013 400 7 2 8 [+] picture button
KRT8P11 SINFRUT00000163576 Keratin-8-like protein 1. [Source:Uniprot/SPTREMBL;Acc:Q9H552]
17.5062 -16.15 0.000000776914 400 3 4 4 [+] picture button
SINFRUT00000176863 Homolog of Homo sapiens "HBE245 [Source:IPI;Acc:IPI00260630]"
16.3095 -19.12 0.000001 400 6 2 4 [+] picture button
BAG4 SINFRUT00000137126 BAG family molecular chaperone regulator 4 (BCL2-associated athanogene 4) (BAG-4) (Silencer of death domains). [Source:Uniprot/SWISSPROT;Acc:O95429]
16.9314 -26.55 0.000001 400 4 1 1 [+] picture button
SLC39A7 SINFRUT00000142288 Zinc transporter SLC39A7 (Solute carrier family 39 member 7) (Histidine-rich membrane protein Ke4). [Source:Uniprot/SWISSPROT;Acc:Q92504]
15.9648 -11.13 0.00000100947 400 8 1 8 [+] picture button
PHLDA2 SINFRUT00000148530 Pleckstrin homology-like domain family A member 2 (Imprinted in placenta and liver protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 3 protein) (Tumor-suppressing STF cDNA 3 protein) (Beckwith-Wiedemann syndrome chromosome re [Source:Uniprot/SWISSPROT;Acc:Q53GA4]
16.6254 -11.99 0.00000117567 400 5 2 6 [+] picture button
FARP2 SINFRUT00000137343 FERM, RhoGEF and pleckstrin domain-containing protein 2 (FERM domain including RhoGEF) (FIR). [Source:Uniprot/SWISSPROT;Acc:O94887]
17.7264 -18.84 0.00000183673 400 6 2 5 [+] picture button
SIN3B SINFRUT00000156988 Paired amphipathic helix protein Sin3b (Transcriptional corepressor Sin3b) (Histone deacetylase complex subunit Sin3b). [Source:Uniprot/SWISSPROT;Acc:O75182]
16.8456 -15.16 0.00000225957 400 3 4 4 [+] picture button
TMEM104 SINFRUT00000163984 Transmembrane protein 104. [Source:Uniprot/SWISSPROT;Acc:Q8NE00]
15.9648 -21.57 0.00000380927 400 6 2 8 [+] picture button
CCDC85B SINFRUT00000134405 Delta-interacting protein A (Hepatitis delta antigen-interacting protein A) (Coiled-coil domain-containing protein 85B). [Source:Uniprot/SWISSPROT;Acc:Q15834]
16.0094 -20.22 0.00000469187 400 8 4 13 [+] picture button
TRAPPC3 SINFRUT00000159045 Trafficking protein particle complex subunit 3 (BET3 homolog). [Source:Uniprot/SWISSPROT;Acc:O43617]
16.6908 -19.64 0.00000595066 400 4 3 5 [+] picture button
C9orf23 SINFRUT00000158562 Alba-like protein C9orf23. [Source:Uniprot/SWISSPROT;Acc:Q8N5L8]
16.7355 -22.64 0.00000598235 400 6 2 8 [+] picture button
DOCK1 SINFRUT00000131862 Dedicator of cytokinesis protein 1 (180 kDa protein downstream of CRK) (DOCK180). [Source:Uniprot/SWISSPROT;Acc:Q14185]
17.0322 -18.11 0.0000088016 400 7 2 6 [+] picture button
SINFRUT00000154228 Homolog of Brachydanio rerio "Forkhead transcription factor c1.1 (Forkhead box C1a). [Source:Uniprot/SPTREMBL;Acc:Q9DE25]"
17.2288 -18.12 0.00000948194 400 5 3 8 [+] picture button
MYCBP2 SINFRUT00000181449 Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein). [Source:Uniprot/SWISSPROT;Acc:O75592]
16.0508 -18.27 0.0000104305 400 6 3 9 [+] picture button
SYT14 (2 of 2) SINFRUT00000164458 Synaptotagmin-14 (Synaptotagmin XIV) (SytXIV). [Source:Uniprot/SWISSPROT;Acc:Q8NB59]
16.5851 -15.88 0.0000114335 400 9 4 14 [+] picture button
C20orf159 (2 of 2) SINFRUT00000129997 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]
16.5153 -19.62 0.0000130989 400 5 3 7 [+] picture button
LHFP SINFRUT00000151059 Lipoma HMGIC fusion partner precursor. [Source:Uniprot/SWISSPROT;Acc:Q9Y693]
15.6244 -11 0.0000134426 400 9 2 13 [+] picture button
SINFRUT00000131318 Homolog of Homo sapiens "Splice Isoform 1 of SH3 adapter protein SPIN90 [Source:IPI;Acc:IPI00009319]"
16.7355 -20.9 0.0000159863 400 5 1 7 [+] picture button
TLE1 SINFRUT00000172645 Transducin-like enhancer protein 1 (ESG1) (E(Sp1) homolog). [Source:Uniprot/SWISSPROT;Acc:Q04724]
17.8365 -28.08 0.0000185902 400 4 1 4 [+] picture button
LRRC7 SINFRUT00000128751 Leucine-rich repeat-containing protein 7 (Protein LAP1) (Densin-180). [Source:Uniprot/SWISSPROT;Acc:Q96NW7]
15.8131 -13.17 0.0000213175 400 7 8 8 [+] picture button
C9orf6 SINFRUT00000164955 similar to CG9288-PA (LOC390403), mRNA [Source:RefSeq_dna;Acc:XR_017272]
18.387 -25.95 0.0000284682 400 3 1 5 [+] picture button
SLC30A5 SINFRUT00000145481 zinc transporter ZTL1 isoform 1 [Source:RefSeq_peptide;Acc:NP_075053]
16.0415 -13.37 0.0000290807 400 3 3 3 [+] picture button
SINFRUT00000150009 Homolog of Homo sapiens "G-protein-coupled receptor induced protein [Source:RefSeq_peptide;Acc:NP_079471]"
18.387 -25.23 0.000034158 400 6 4 11 [+] picture button
SLC39A6 SINFRUT00000154929 Zinc transporter SLC39A6 precursor (Solute carrier family 39 member 6) (Estrogen-regulated protein LIV-1). [Source:Uniprot/SWISSPROT;Acc:Q13433]
15.8547 -23.79 0.0000351798 400 7 2 6 [+] picture button
ITGA8 SINFRUT00000174537 Integrin alpha-8 precursor [Contains: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]. [Source:Uniprot/SWISSPROT;Acc:P53708]
20.1012 -29.08 0.0000390038 400 8 3 13 [+] picture button
ELL3 (1 of 2) SINFRUT00000160912 RNA polymerase II elongation factor ELL3. [Source:Uniprot/SWISSPROT;Acc:Q9HB65]
16.0749 -18.17 0.0000396944 400 6 3 6 [+] picture button
GALNT2 SINFRUT00000143185 Polypeptide N-acetylgalactosaminyltransferase 2 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 2) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 2) (Polypeptide GalNAc transferase 2) (GalNAc-T2) (pp-GaNTase 2) [Contains: Polypeptid [Source:Uniprot/SWISSPROT;Acc:Q10471]
18.0567 -25.57 0.00004024 400 3 1 3 [+] picture button
RABEP2 SINFRUT00000159499 Rab GTPase-binding effector protein 2 (Rabaptin-5beta). [Source:Uniprot/SWISSPROT;Acc:Q9H5N1]
18.0567 -17.93 0.0000409573 400 4 2 7 [+] picture button
VEGFB SINFRUT00000133512 Vascular endothelial growth factor B precursor (VEGF-B) (VEGF-related factor) (VRF). [Source:Uniprot/SWISSPROT;Acc:P49765]
16.2951 -20.73 0.0000484446 400 4 2 4 [+] picture button
TMEM68 SINFRUT00000166441 transmembrane protein 68 [Source:RefSeq_peptide;Acc:NP_689630]
17.7264 -16.61 0.0000516904 400 8 1 11 [+] picture button
ELF4 SINFRUT00000129060 ETS-related transcription factor Elf-4 (E74-like factor 4) (Myeloid Elf-1-like factor). [Source:Uniprot/SWISSPROT;Acc:Q99607]
15.9648 -14.9 0.0000524562 400 3 1 4 [+] picture button
IDH3G SINFRUT00000161887 Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH). [Source:Uniprot/SWISSPROT;Acc:P51553]
16.6254 -14.8 0.0000548097 400 4 2 5 [+] picture button
DCTN5 SINFRUT00000172226 Dynactin subunit 5 (Dynactin subunit p25). [Source:Uniprot/SWISSPROT;Acc:Q9BTE1]
16.7355 -13.52 0.0000586399 400 4 2 5 [+] picture button
NRBP2 SINFRUT00000181270 Nuclear receptor-binding protein 2 (Transformation-related gene 16 protein) (TRG-16). [Source:Uniprot/SWISSPROT;Acc:Q9NSY0]
15.8202 -16.41 0.0000663951 400 4 2 4 [+] picture button
CDC2L1 SINFRUT00000130502 PITSLRE serine/threonine-protein kinase CDC2L2 (EC 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 2) (CDK11). [Source:Uniprot/SWISSPROT;Acc:Q9UQ88]
16.4052 -15.15 0.0000665774 400 9 2 14 [+] picture button
DHX36 SINFRUT00000154389 Probable ATP-dependent RNA helicase DHX36 (EC 3.6.1.-) (DEAH box protein 36) (MLE-like protein 1) (RNA helicase associated with AU-rich element ARE). [Source:Uniprot/SWISSPROT;Acc:Q9H2U1]
15.6344 -19.94 0.0000692984 400 8 2 13 [+] picture button
NDUFV3 (2 of 2) SINFRUT00000142274 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 9 kDa subunit) (Complex I-9kD) (CI-9kD) (Renal carcinoma antigen NY-REN- 4). [Source:Uniprot/SWISSPROT;Acc:P56181]
15.8728 -23.15 0.0000773814 400 5 1 3 [+] picture button
ABHD11 SINFRUT00000148531 Abhydrolase domain-containing protein 11 (EC 3.-.-.-) (Williams-Beuren syndrome chromosome region 21 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NFV4]
15.7096 -17.52 0.0000783726 400 9 3 12 [+] picture button
HAO2 SINFRUT00000137123 Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long- chain L-2-hydroxy acid oxidase). [Source:Uniprot/SWISSPROT;Acc:Q9NYQ3]
15.6693 -18.25 0.0000793972 400 6 2 8 [+] picture button
PRKAB1 (2 of 2) SINFRUT00000135094 5'-AMP-activated protein kinase subunit beta-1 (AMPK beta-1 chain) (AMPKb). [Source:Uniprot/SWISSPROT;Acc:Q9Y478]
18.0965 -20.07 0.0000812882 400 3 2 3 [+] picture button
INTS5 SINFRUT00000141998 Integrator complex subunit 5 (Int5). [Source:Uniprot/SWISSPROT;Acc:Q6P9B9]
16.2951 -14.56 0.0000836431 400 3 2 3 [+] picture button
ELOVL6 SINFRUT00000132732 Elongation of very long chain fatty acids protein 6 (hELO2). [Source:Uniprot/SWISSPROT;Acc:Q9H5J4]
16.6254 -15.88 0.0000839935 400 6 2 9 [+] picture button
WBSCR17 SINFRUT00000135445 Putative polypeptide N-acetylgalactosaminyltransferase-like protein 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 3) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase- like protein 3) (Polypeptide GalNAc transferase-lik [Source:Uniprot/SWISSPROT;Acc:Q6IS24]
15.6344 -12.77 0.0000845333 400 9 3 12 [+] picture button

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Download table: GFF TXT
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