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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7g

750 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.2769 -18.3 0.0000000000000920453 400 6 3 10 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.5153 -15.55 0.000000000111674 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.7355 -13.52 0.000000000555098 400 4 3 5 [+] picture button
TGDS SINFRUT00000157727 dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46). [Source:Uniprot/SWISSPROT;Acc:O95455]
16.7355 -17.33 0.0000000057972 400 7 2 11 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
17.0031 -15.71 0.0000000281153 400 4 2 6 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
18.2769 -13.52 0.0000000294605 400 2 4 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
17.4266 -17.56 0.0000000619932 400 4 12 5 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
16.9557 -18.21 0.000000169327 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
18.2769 -23.98 0.000000188192 400 4 1 6 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
17.4781 -16.99 0.00000027015 400 4 3 5 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
17.2396 -18.67 0.000000295206 400 5 10 10 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
18.6473 -19.49 0.000000352332 400 5 2 7 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
17.4497 -20.65 0.000000354359 400 5 2 9 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
16.5926 -13.82 0.000000419296 400 3 4 5 [+] picture button
SV2C (2 of 2) SINFRUT00000151256 Synaptic vesicle glycoprotein 2C. [Source:Uniprot/SWISSPROT;Acc:Q496J9]
16.5153 -19.92 0.000000452252 400 9 1 8 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
16.3056 -11.52 0.000000519952 400 9 4 16 [+] picture button
TNFSF10 (2 of 2) SINFRUT00000137638 Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (Apo-2 ligand) (Apo-2L) (CD253 antigen). [Source:Uniprot/SWISSPROT;Acc:P50591]
16.2951 -13.71 0.000000553588 400 4 4 6 [+] picture button
SPRYD4 SINFRUT00000143869 SPRY domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8WW59]
16.4052 -17.99 0.000000653369 400 7 3 8 [+] picture button
O73801_FUGRU SINFRUT00000158589 Serine/threonine kinase receptor type1. [Source:Uniprot/SPTREMBL;Acc:O73801]
17.2448 -19.04 0.000000822493 400 2 7 3 [+] picture button
SNX17 SINFRUT00000139753 Sorting nexin-17. [Source:Uniprot/SWISSPROT;Acc:Q15036]
16.2951 -15.94 0.000000857802 400 5 4 6 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
17.5062 -16.38 0.00000149287 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
16.4557 -15.96 0.00000151916 400 2 3 2 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.3961 -13.49 0.00000230348 400 6 1 11 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
17.2534 -16.43 0.00000234134 400 6 4 9 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
17.5062 -22.02 0.00000261555 400 5 4 6 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
16.4798 -14.56 0.00000489506 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.9375 -24.08 0.00000545783 400 7 2 13 [+] picture button
CDC23 SINFRUT00000159406 Cell division cycle protein 23 homolog (Anaphase-promoting complex subunit 8) (APC8) (Cyclosome subunit 8). [Source:Uniprot/SWISSPROT;Acc:Q9UJX2]
16.6624 -16.02 0.00000602599 400 2 1 2 [+] picture button
BRP44L SINFRUT00000130233 Brain protein 44-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y5U8]
16.221 -15.38 0.00000706812 400 5 2 7 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
17.8365 -19.86 0.00000858788 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.5062 -18.81 0.0000090791 400 9 2 12 [+] picture button
FAM26A SINFRUT00000156543 Protein FAM26A. [Source:Uniprot/SWISSPROT;Acc:Q86XJ0]
16.221 -16.92 0.0000098529 400 3 2 3 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.7264 -17.78 0.0000112516 400 4 3 7 [+] picture button
FGL2 SINFRUT00000156069 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
16.7822 -17.76 0.0000113587 400 5 4 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
16.2951 -15.86 0.0000117599 400 5 2 7 [+] picture button
C2orf40 SINFRUT00000181490 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
16.6254 -17.48 0.000012184 400 6 1 9 [+] picture button
FRMPD1 (2 of 2) SINFRUT00000140655 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.6254 -15.89 0.0000125395 400 6 3 6 [+] picture button
ATAD2 SINFRUT00000152287 ATPase family AAA domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6PL18]
16.402 -16.18 0.0000133895 400 7 2 8 [+] picture button
SINFRUT00000129112 Homolog of Carassius auratus "Cytoplasmic polyadenylation element binding protein. [Source:Uniprot/SPTREMBL;Acc:Q9DED5]"
16.3399 -17.01 0.0000153383 400 8 9 15 [+] picture button
C14orf115 SINFRUT00000152306 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
16.8467 -20.05 0.000016302 400 2 3 4 [+] picture button
SOCS3 (2 of 2) SINFRUT00000179268 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
16.2487 -17.26 0.0000205119 400 4 3 5 [+] picture button
AMD1 SINFRUT00000128146 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S- adenosylmethionine decarboxylase beta chain]. [Source:Uniprot/SWISSPROT;Acc:P17707]
16.3314 -21.42 0.0000207267 400 5 2 4 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
16.7247 -17.5 0.0000210979 400 8 3 12 [+] picture button
CRYBA4 SINFRUT00000131939 Beta crystallin A4 (Beta-A4-crystallin). [Source:Uniprot/SWISSPROT;Acc:P53673]
16.8456 -15.82 0.0000227733 400 5 2 6 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
17.3294 -19.34 0.0000227986 400 7 2 13 [+] picture button
MXD4 SINFRUT00000153473 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]
16.789 -15.47 0.0000308579 400 4 2 7 [+] picture button
TRIP6 SINFRUT00000158859 Thyroid receptor-interacting protein 6 (TRIP-6) (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1). [Source:Uniprot/SWISSPROT;Acc:Q15654]
16.5521 -19.8 0.0000334663 400 3 4 6 [+] picture button
SLC27A4 SINFRUT00000151747 Long-chain fatty acid transport protein 4 (EC 6.2.1.-) (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4). [Source:Uniprot/SWISSPROT;Acc:Q6P1M0]
16.8784 -16.34 0.0000344437 400 4 4 4 [+] picture button
OXA1L SINFRUT00000161618 Inner membrane protein OXA1L, mitochondrial precursor (Oxidase assembly 1-like protein) (OXA1-like protein) (OXA1Hs) (Hsa). [Source:Uniprot/SWISSPROT;Acc:Q15070]
17.1759 -14.26 0.0000344725 400 3 2 5 [+] picture button
SAMD1 SINFRUT00000181647 Atherin (Sterile alpha motif domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6SPF0]
16.4745 -14.28 0.0000384204 400 7 4 10 [+] picture button

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Download table: GFF TXT
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