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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7e

780 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.6072 -19.92 0.0000000000000920453 400 6 3 10 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.9983 -14.1 0.000000000000167919 400 5 4 5 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.8456 -15.86 0.000000000111674 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.7355 -13.46 0.000000000555098 400 4 3 5 [+] picture button
RCN1_FUGRU SINFRUT00000128328 Reticulocalbin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:O93434]
16.3733 -15.38 0.00000000891659 400 6 1 7 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
17.3961 -13.27 0.0000000294605 400 2 4 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
16.3095 -16.57 0.0000000619932 400 4 12 5 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.5926 -15.62 0.0000000998851 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
16.9557 -17.38 0.000000169327 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.8456 -19.26 0.000000188192 400 4 1 6 [+] picture button
TTLL4 SINFRUT00000128674 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]
16.4056 -16.93 0.000000215448 400 5 1 6 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
18.0788 -16.51 0.000000352332 400 5 2 7 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
17.4497 -20.93 0.000000354359 400 5 2 9 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
16.9267 -14.86 0.000000419296 400 3 4 5 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
16.3056 -11.23 0.000000519952 400 9 4 16 [+] picture button
TNFSF10 (2 of 2) SINFRUT00000137638 Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (Apo-2 ligand) (Apo-2L) (CD253 antigen). [Source:Uniprot/SWISSPROT;Acc:P50591]
16.6254 -15.31 0.000000553588 400 4 4 6 [+] picture button
SPRYD4 SINFRUT00000143869 SPRY domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8WW59]
16.7355 -15.62 0.000000653369 400 7 3 8 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
19.2678 -21.43 0.00000149287 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
16.4557 -14.87 0.00000151916 400 2 3 2 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.5062 -14.13 0.00000230348 400 6 1 11 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
16.9557 -19.51 0.00000261555 400 5 4 6 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
16.8162 -13.11 0.00000489506 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.1668 -21.37 0.00000545783 400 7 2 13 [+] picture button
GRTP1 SINFRUT00000138432 growth hormone regulated TBC protein 1 [Source:RefSeq_peptide;Acc:NP_078995]
16.7355 -14.76 0.00000600022 400 6 2 7 [+] picture button
CDC23 SINFRUT00000159406 Cell division cycle protein 23 homolog (Anaphase-promoting complex subunit 8) (APC8) (Cyclosome subunit 8). [Source:Uniprot/SWISSPROT;Acc:Q9UJX2]
16.6624 -13.7 0.00000602599 400 2 1 2 [+] picture button
CCNK SINFRUT00000128804 Cyclin-K. [Source:Uniprot/SWISSPROT;Acc:O75909]
16.5153 -16.56 0.00000809588 400 4 2 4 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
17.8365 -18.86 0.00000858788 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
16.4052 -17.13 0.0000090791 400 9 2 12 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
17.3961 -14.49 0.00000933749 400 6 2 7 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.1759 -18.14 0.0000112516 400 4 3 7 [+] picture button
FGL2 SINFRUT00000156069 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
16.7822 -19.59 0.0000113587 400 5 4 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
17.1759 -18.41 0.0000117599 400 5 2 7 [+] picture button
SACM1L SINFRUT00000183462 suppressor of actin 1 [Source:RefSeq_peptide;Acc:NP_054735]
16.5153 -10.73 0.0000118362 400 7 2 12 [+] picture button
C2orf40 SINFRUT00000181490 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
16.185 -17.12 0.000012184 400 6 1 9 [+] picture button
SINFRUT00000129112 Homolog of Carassius auratus "Cytoplasmic polyadenylation element binding protein. [Source:Uniprot/SPTREMBL;Acc:Q9DED5]"
17.2291 -14.91 0.0000153383 400 8 9 15 [+] picture button
HOXD3 SINFRUT00000131831 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
17.1284 -18.05 0.0000190709 400 9 4 16 [+] picture button
SINFRUT00000148519 Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9]Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9] BY ORTHOLOGY TO:AGAP010338-RA
17.8365 -21.35 0.0000193405 400 3 3 4 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
16.9462 -20 0.0000210979 400 8 3 12 [+] picture button
ACVR2B SINFRUT00000161220 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
17.7264 -21.63 0.0000213481 400 5 4 7 [+] picture button
CRYBA4 SINFRUT00000131939 Beta crystallin A4 (Beta-A4-crystallin). [Source:Uniprot/SWISSPROT;Acc:P53673]
16.7355 -14.94 0.0000227733 400 5 2 6 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
17.8813 -19.91 0.0000227986 400 7 2 13 [+] picture button
NM_022659.2 SINFRUT00000178081 early B-cell factor 2 (EBF2), mRNA [Source:RefSeq_dna;Acc:NM_022659]
16.185 -13.52 0.0000301059 400 5 3 6 [+] picture button
MXD4 SINFRUT00000153473 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]
16.3383 -14.77 0.0000308579 400 4 2 7 [+] picture button
SLC27A4 SINFRUT00000151747 Long-chain fatty acid transport protein 4 (EC 6.2.1.-) (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4). [Source:Uniprot/SWISSPROT;Acc:Q6P1M0]
16.7659 -18.44 0.0000344437 400 4 4 4 [+] picture button
SAMD1 SINFRUT00000181647 Atherin (Sterile alpha motif domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6SPF0]
16.8062 -17.42 0.0000384204 400 7 4 10 [+] picture button
SLC9A6 (1 of 2) SINFRUT00000159805 Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6) (NHE-6) (Solute carrier family 9 member 6). [Source:Uniprot/SWISSPROT;Acc:Q92581]
17.5062 -20.29 0.000039507 400 8 4 11 [+] picture button
HGS SINFRUT00000135569 Hepatocyte growth factor-regulated tyrosine kinase substrate (Protein pp110) (Hrs). [Source:Uniprot/SWISSPROT;Acc:O14964]
16.2291 -15.88 0.0000395204 400 4 3 8 [+] picture button
SAP130 SINFRUT00000128866 Histone deacetylase complex subunit SAP130 (130 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p130). [Source:Uniprot/SWISSPROT;Acc:Q9H0E3]
16.7355 -17.62 0.0000410877 400 6 4 7 [+] picture button
SLC45A4 (2 of 2) SINFRUT00000136627 solute carrier family 45, member 4 [Source:RefSeq_peptide;Acc:NP_001073900]
17.6163 -15.94 0.0000430127 400 4 3 11 [+] picture button
PPP1R16A SINFRUT00000156155 Protein phosphatase 1 regulatory subunit 16A (Myosin phosphatase- targeting subunit 3). [Source:Uniprot/SWISSPROT;Acc:Q96I34]
17.9466 -17.6 0.0000459699 400 7 2 12 [+] picture button

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Download table: GFF TXT
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