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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7d

844 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.4971 -20.07 0.0000000000000920453 400 6 3 10 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.9917 -20.42 0.000000000000167919 400 5 4 5 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
17.0658 -19.63 0.000000000111674 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
17.5062 -15.81 0.000000000555098 400 4 3 5 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
17.8863 -24.97 0.0000000281153 400 4 2 6 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
20.0385 -24.52 0.0000000294605 400 2 4 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
16.5329 -14.52 0.0000000619932 400 4 12 5 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
18.1729 -24.39 0.0000000998851 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
18.6072 -25.58 0.000000169327 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.8456 -17.78 0.000000188192 400 4 1 6 [+] picture button
NP_060609.2 SINFRUT00000181493 Full-length cDNA 5-PRIME end of clone CS0DB008YP22 of Neuroblastoma of Homo sapiens (human) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q86TR1]
16.4583 -13.85 0.000000235984 400 6 1 9 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
16.3648 -18.91 0.00000027015 400 4 3 5 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.5722 -18.74 0.000000295206 400 5 10 10 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
18.0788 -20.88 0.000000352332 400 5 2 7 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
17.2607 -18.21 0.000000419296 400 3 4 5 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.193 -22.78 0.000000519952 400 9 4 16 [+] picture button
TNFSF10 (2 of 2) SINFRUT00000137638 Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (Apo-2 ligand) (Apo-2L) (CD253 antigen). [Source:Uniprot/SWISSPROT;Acc:P50591]
16.8456 -15.22 0.000000553588 400 4 4 6 [+] picture button
ARL5B SINFRUT00000134114 ADP-ribosylation factor-like protein 5B (ADP-ribosylation factor-like protein 8). [Source:Uniprot/SWISSPROT;Acc:Q96KC2]
16.3202 -26.34 0.000000615367 400 4 2 5 [+] picture button
O73801_FUGRU SINFRUT00000158589 Serine/threonine kinase receptor type1. [Source:Uniprot/SPTREMBL;Acc:O73801]
17.4674 -18.64 0.000000822493 400 2 7 3 [+] picture button
VPS13D SINFRUT00000144014 Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
16.8456 -23.94 0.000000916993 400 4 2 6 [+] picture button
PENK SINFRUT00000178208 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P01210]
16.4052 -17.2 0.00000146981 400 7 2 15 [+] picture button
NEU3 SINFRUT00000159385 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
16.7355 -13.15 0.00000148093 400 7 3 9 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
16.9557 -16.17 0.00000149287 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
18.4436 -25.33 0.00000151916 400 2 3 2 [+] picture button
MGAT4A SINFRUT00000163820 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]
16.258 -12.43 0.00000154834 400 6 1 7 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.1759 -16.32 0.00000230348 400 6 1 11 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
16.9216 -15.22 0.00000234134 400 6 4 9 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
16.2951 -18.06 0.00000261555 400 5 4 6 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
16.4798 -21.21 0.00000489506 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
19.2678 -22.11 0.00000545783 400 7 2 13 [+] picture button
C1orf131 SINFRUT00000156710 C1orf131 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7Z6H5]
16.484 -15.19 0.00000639785 400 4 3 7 [+] picture button
FBP1 SINFRUT00000139771 Fructose-1,6-bisphosphatase 1 (EC 3.1.3.11) (D-fructose-1,6- bisphosphate 1-phosphohydrolase 1) (FBPase 1). [Source:Uniprot/SWISSPROT;Acc:P09467]
16.2736 -19.91 0.00000837752 400 8 2 15 [+] picture button
RBM35B SINFRUT00000158224 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.3734 -13.35 0.00000839126 400 3 2 5 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
17.5062 -21.96 0.00000858788 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.3961 -21.63 0.0000090791 400 9 2 12 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
17.3961 -20.88 0.00000933749 400 6 2 7 [+] picture button
PPRC1 SINFRUT00000151552 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.7173 -18.17 0.00000985341 400 5 4 8 [+] picture button
HIGD2BP SINFRUT00000137215 HIG1 domain family, member 2B pseudogene (HIGD2BP) on chromosome 15 [Source:RefSeq_dna;Acc:NR_002780]
16.4052 -22.07 0.0000103068 400 3 1 3 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.8365 -19.15 0.0000112516 400 4 3 7 [+] picture button
FGL2 SINFRUT00000156069 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
16.451 -15.94 0.0000113587 400 5 4 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
16.2951 -16.56 0.0000117599 400 5 2 7 [+] picture button
FRMPD1 (2 of 2) SINFRUT00000140655 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.6254 -18.51 0.0000125395 400 6 3 6 [+] picture button
KIAA1841 SINFRUT00000135257 KIAA1841 (KIAA1841), mRNA [Source:RefSeq_dna;Acc:NM_032506]
16.7355 -21.52 0.0000148541 400 4 2 4 [+] picture button
Q6Q2A7_FUGRU SINFRUT00000128591 Myogenin (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6Q2A7]
16.2951 -19.38 0.0000162071 400 3 2 5 [+] picture button
AP2S1 SINFRUT00000130860 AP-2 complex subunit sigma-1 (Adapter-related protein complex 2 sigma- 1 subunit) (Clathrin coat assembly protein AP17) (Clathrin coat- associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (HA2 17 kDa subunit) (Clathrin assembly protein [Source:Uniprot/SWISSPROT;Acc:P53680]
16.5946 -13.69 0.0000182551 400 5 2 6 [+] picture button
SINFRUT00000148519 Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9]Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9] BY ORTHOLOGY TO:AGAP010338-RA
16.8456 -18.82 0.0000193405 400 3 3 4 [+] picture button
FBXL14 (1 of 2) SINFRUT00000182941 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.7822 -17.05 0.0000204223 400 6 4 7 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
18.0538 -17.29 0.0000210979 400 8 3 12 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
16.9983 -15.95 0.0000227986 400 7 2 13 [+] picture button
CYC1 SINFRUT00000151654 Cytochrome c1 heme protein, mitochondrial precursor (Cytochrome c-1). [Source:Uniprot/SWISSPROT;Acc:P08574]
17.9466 -23.83 0.000023453 400 5 3 5 [+] picture button

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Download table: GFF TXT
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