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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and dre-miR-93

867 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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BAMBI SINFRUT00000143916 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
17.94 -16.37 0.000000000806131 400 5 13 14 [+] picture button
THEX1 SINFRUT00000160134 3' histone mRNA exonuclease 1 (EC 3.1.-.-) (3'-5' exonuclease ERI1) (Eri-1 homolog) (Histone mRNA 3' end-specific exoribonuclease) (Protein 3'hExo) (HEXO). [Source:Uniprot/SWISSPROT;Acc:Q8IV48]
17.6806 -13.78 0.0000000780621 400 3 2 9 [+] picture button
SLAIN2 SINFRUT00000172529 SLAIN2 protein. [Source:Uniprot/SPTREMBL;Acc:Q8N5R3]
17.1759 -11.26 0.000000137401 400 4 6 6 [+] picture button
RGMB SINFRUT00000148370 RGM domain family member B precursor. [Source:Uniprot/SWISSPROT;Acc:Q6NW40]
18.2124 -14.69 0.000000144869 400 8 2 18 [+] picture button
C11orf30 SINFRUT00000177248 Protein EMSY. [Source:Uniprot/SWISSPROT;Acc:Q7Z589]
16.6254 -12.74 0.00000015666 400 3 2 10 [+] picture button
PERQ1 SINFRUT00000173231 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
17.1759 -14.36 0.000000248336 400 4 1 7 [+] picture button
CLIP4 SINFRUT00000138713 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.0223 -10.17 0.000000288707 400 6 9 17 [+] picture button
TSG101 SINFRUT00000166265 Tumor susceptibility gene 101 protein. [Source:Uniprot/SWISSPROT;Acc:Q99816]
18.387 -15.17 0.000000338172 400 6 3 11 [+] picture button
ARID4B SINFRUT00000148622 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
17.9466 -16.56 0.000000344566 400 4 11 10 [+] picture button
DOCK4 SINFRUT00000133916 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
18.2769 -17.31 0.000000600332 400 8 5 15 [+] picture button
USP46 SINFRUT00000130570 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
18.8274 -24.16 0.000000739788 400 5 2 11 [+] picture button
ANKRD9 SINFRUT00000179309 Ankyrin repeat domain-containing protein 9. [Source:Uniprot/SWISSPROT;Acc:Q96BM1]
17.1759 -16.37 0.000000748107 400 6 1 8 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
18.0181 -15.08 0.000000875718 400 5 10 10 [+] picture button
PDE8B SINFRUT00000136490 High-affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B (EC 3.1.4.17) (HSPDE8B). [Source:Uniprot/SWISSPROT;Acc:O95263]
17.6163 -17.22 0.00000103222 400 6 4 6 [+] picture button
MSRA SINFRUT00000152470 Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein- methionine-S-oxide reductase) (PMSR) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase). [Source:Uniprot/SWISSPROT;Acc:Q9UJ68]
17.8365 -13.29 0.00000140915 400 3 2 9 [+] picture button
PKNOX1 SINFRUT00000169432 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
17.7393 -15.15 0.00000192956 400 5 4 7 [+] picture button
USE1_HUMAN SINFRUT00000157007 Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43]
17.5416 -15.8 0.00000257552 400 5 2 9 [+] picture button
HS3ST5 SINFRUT00000153861 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
17.1981 -12.51 0.00000277449 400 6 2 13 [+] picture button
SMAD2 SINFRUT00000167872 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Mad-related protein 2) (hMAD-2) (JV18-1) (hSMAD2). [Source:Uniprot/SWISSPROT;Acc:Q15796]
18.9179 -13.03 0.00000279778 400 5 4 12 [+] picture button
PLEKHB2 SINFRUT00000167190 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
17.9466 -17.13 0.00000294556 400 4 2 12 [+] picture button
DDEF2 SINFRUT00000136346 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
17.3961 -17.69 0.00000302437 400 5 2 12 [+] picture button
ALAS2 SINFRUT00000181410 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
19.5981 -26.01 0.00000439663 400 5 3 15 [+] picture button
OBFC2A SINFRUT00000127690 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
17.7424 -16.1 0.00000564817 400 5 2 11 [+] picture button
NP_001034869.1 SINFRUT00000148117 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]
16.9935 -14.79 0.00000577251 400 5 2 6 [+] picture button
KIF7 SINFRUT00000164869 kinesin family member 7 [Source:RefSeq_peptide;Acc:NP_940927]
17.7902 -13.28 0.0000059876 400 8 2 15 [+] picture button
POLH SINFRUT00000131077 DNA polymerase eta (EC 2.7.7.7) (RAD30 homolog A) (Xeroderma pigmentosum variant type protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y253]
17.7264 -15.7 0.00000732842 400 6 2 6 [+] picture button
SP8 (2 of 2) SINFRUT00000161022 Transcription factor Sp8 (Specificity protein 8). [Source:Uniprot/SWISSPROT;Acc:Q8IXZ3]
19.2167 -17.47 0.00000774165 400 2 2 4 [+] picture button
KLHL14 SINFRUT00000129624 Kelch-like protein 14. [Source:Uniprot/SWISSPROT;Acc:Q9P2G3]
17.0125 -13.63 0.00000875904 400 6 6 13 [+] picture button
CPEB4 (2 of 2) SINFRUT00000143805 Cytoplasmic polyadenylation element-binding protein 4 (CPE-binding protein 4) (CPE-BP4) (hCPEB-4). [Source:Uniprot/SWISSPROT;Acc:Q17RY0]
19.3779 -23.36 0.00000903916 400 3 4 7 [+] picture button
MTNR1A SINFRUT00000160445 Melatonin receptor type 1A (Mel-1A-R) (Mel1a melatonin receptor). [Source:Uniprot/SWISSPROT;Acc:P48039]
17.047 -13.48 0.0000108273 400 7 4 12 [+] picture button
SLC12A8 SINFRUT00000157686 Zinc finger protein 148 (Zinc finger DNA-binding protein 89) (Transcription factor ZBP-89). [Source:Uniprot/SWISSPROT;Acc:Q9UQR1]
17.6556 -16.43 0.0000110199 400 9 11 18 [+] picture button
EGR1 SINFRUT00000164661 Early growth response protein 1 (EGR-1) (Krox-24 protein) (Transcription factor Zif268) (Nerve growth factor-induced protein A) (NGFI-A) (Transcription factor ETR103) (Zinc finger protein 225) (AT225). [Source:Uniprot/SWISSPROT;Acc:P18146]
18.5436 -18.84 0.0000113127 400 6 4 14 [+] picture button
Q96CK5_HUMAN SINFRUT00000163195 Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]"
18.1668 -20.9 0.0000114618 400 7 3 11 [+] picture button
TBX3 SINFRUT00000140299 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
17.1627 -11.99 0.0000115491 400 5 4 10 [+] picture button
GAB3 SINFRUT00000156307 Gab3 protein isoform 2 [Source:RefSeq_peptide;Acc:NP_542179]
17.1478 -10.05 0.0000117712 400 7 3 12 [+] picture button
ST5 SINFRUT00000145249 Suppression of tumorigenicity 5 (HeLa tumor suppression 1) (DENN domain-containing protein 2B). [Source:Uniprot/SWISSPROT;Acc:P78524]
19.0476 -19.12 0.0000122029 400 4 2 13 [+] picture button
APCDD1 SINFRUT00000156023 Protein APCDD1 precursor (Adenomatosis polyposis coli down-regulated 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q8J025]
18.0567 -18.18 0.0000124105 400 6 5 8 [+] picture button
ANUBL1 SINFRUT00000149221 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
17.3294 -18.83 0.0000125696 400 6 3 14 [+] picture button
FBXL7 SINFRUT00000140108 F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat protein 7) (F-box protein FBL6/FBL7). [Source:Uniprot/SWISSPROT;Acc:Q9UJT9]
17.6211 -17.42 0.0000142673 400 8 3 16 [+] picture button
SINFRUT00000178665 Homolog of Gallus gallus "Anti-dorsalizing morphogenetic protein. [Source:Uniprot/SPTREMBL;Acc:Q9PVK1]"
18.1668 -14.8 0.000014437 400 5 2 10 [+] picture button
UBE2W SINFRUT00000127910 Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02]
17.0658 -15.92 0.0000147426 400 5 6 13 [+] picture button
SOCS6 SINFRUT00000155742 Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4). [Source:Uniprot/SWISSPROT;Acc:O14544]
17.6705 -12.56 0.0000158958 400 5 6 11 [+] picture button
KIAA0494 SINFRUT00000157240 Uncharacterized calcium-binding protein KIAA0494. [Source:Uniprot/SWISSPROT;Acc:O75071]
17.7659 -16.45 0.0000164776 400 5 3 10 [+] picture button
FGF3 SINFRUT00000142325 INT-2 proto-oncogene protein precursor (Fibroblast growth factor 3) (FGF-3) (HBGF-3). [Source:Uniprot/SWISSPROT;Acc:P11487]
17.077 -14.32 0.000016918 400 8 2 8 [+] picture button
LACE1 (2 of 2) SINFRUT00000167709 Lactation elevated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8WV93]
18.1668 -20.47 0.0000186596 400 4 1 7 [+] picture button
DIP2A SINFRUT00000133657 Disco-interacting protein 2 homolog A. [Source:Uniprot/SWISSPROT;Acc:Q14689]
17.3961 -16.47 0.0000193125 400 5 2 10 [+] picture button
PPM1K SINFRUT00000143620 Protein phosphatase 2C isoform kappa (EC 3.1.3.16) (PP2C-kappa) (Protein phosphatase 1K) (PP2C-like mitochondrial protein). [Source:Uniprot/SWISSPROT;Acc:Q8N3J5]
17.2142 -14.71 0.0000203976 400 5 3 9 [+] picture button
LSM1 SINFRUT00000137118 U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like). [Source:Uniprot/SWISSPROT;Acc:O15116]
17.5062 -14.21 0.0000207819 400 7 2 15 [+] picture button
SINFRUT00000149706 Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]"
17.4115 -12.64 0.0000211503 400 5 3 14 [+] picture button
FASTK SINFRUT00000171831 Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST kinase). [Source:Uniprot/SWISSPROT;Acc:Q14296]
16.9863 -21.53 0.0000216163 400 6 1 8 [+] picture button

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Download table: GFF TXT
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