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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and dre-miR-155

761 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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JARID2 SINFRUT00000140264 Protein Jumonji (Jumonji/ARID domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q92833]
17.7306 -13.92 0.000000000656621 400 6 4 12 [+] picture button
SPI1 (1 of 2) SINFRUT00000168194 Transcription factor PU.1 (31 kDa transforming protein). [Source:Uniprot/SWISSPROT;Acc:P17947]
17.7264 -13.1 0.0000000273355 400 5 3 6 [+] picture button
TRIP13 SINFRUT00000145225 Thyroid receptor-interacting protein 13 (TRIP-13) (Thyroid hormone receptor interactor 13) (Human papillomavirus type 16 E1 protein- binding protein) (HPV16 E1 protein-binding protein) (16E1-BP). [Source:Uniprot/SWISSPROT;Acc:Q15645]
17.4898 -14.54 0.0000000345701 400 7 2 9 [+] picture button
PSCDBP SINFRUT00000142583 Pleckstrin homology Sec7 and coiled-coil domains-binding protein (Cytohesin-binding protein HE) (CYBR) (Cytohesin binder and regulator) (Cytohesin-interacting protein). [Source:Uniprot/SWISSPROT;Acc:O60759]
16.8456 -13.87 0.0000001074 400 7 2 9 [+] picture button
LIN9 SINFRUT00000144725 Lin-9 homolog (huLin-9) (hLin-9) (Beta-subunit associated regulator of apoptosis) (Type I interferon receptor beta chain-associated protein) (TUDOR gene similar protein) (pRB-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q5TKA1]
16.0749 -12.63 0.000000555312 400 8 4 11 [+] picture button
USP33 SINFRUT00000157999 Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.1.2.15) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (Deubiquitinating enzyme 33) (VHL-interacting deubiquitinating enzyme 1). [Source:Uniprot/SWISSPROT;Acc:Q8TEY7]
16.0749 -11.59 0.000000804667 400 4 5 6 [+] picture button
CBL (2 of 2) SINFRUT00000156955 E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto- oncogene) (RING finger protein 55). [Source:Uniprot/SWISSPROT;Acc:P22681]
19.1577 -24.86 0.000001 400 6 1 5 [+] picture button
RAB9A (2 of 2) SINFRUT00000132011 Ras-related protein Rab-9 (Rab-9A). [Source:Uniprot/SWISSPROT;Acc:P51151]
15.8282 -11.65 0.00000219308 400 6 8 9 [+] picture button
CDC37 (1 of 2) SINFRUT00000147747 Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37). [Source:Uniprot/SWISSPROT;Acc:Q16543]
16.185 -11.88 0.00000263423 400 9 1 13 [+] picture button
KIAA1267 SINFRUT00000135488 Uncharacterized protein KIAA1267. [Source:Uniprot/SWISSPROT;Acc:Q7Z3B3]
17.0017 -17.91 0.00000307428 400 3 1 3 [+] picture button
PHYHD1 SINFRUT00000128555 phytanoyl-CoA dioxygenase domain containing 1 [Source:RefSeq_peptide;Acc:NP_777593]
16.8831 -12.29 0.00000501164 400 5 2 7 [+] picture button
TCP11L2 SINFRUT00000160728 t-complex 11 (mouse) like 2 [Source:RefSeq_peptide;Acc:NP_689985]
17.0176 -13.48 0.00000540742 400 4 1 5 [+] picture button
SINFRUT00000141742 Homolog of Brachydanio rerio "Similar to forkhead box L1. [Source:Uniprot/SPTREMBL;Acc:Q7SY22]"
16.9557 -12.12 0.00000668239 400 1 6 1 [+] picture button
EVPL (2 of 2) SINFRUT00000152870 Envoplakin (210 kDa paraneoplastic pemphigus antigen) (p210) (210 kDa cornified envelope precursor protein). [Source:Uniprot/SWISSPROT;Acc:Q92817]
18.7173 -16.4 0.0000083841 400 6 2 7 [+] picture button
YEATS4 SINFRUT00000158585 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]
15.9648 -14.73 0.00000852191 400 6 1 9 [+] picture button
BET1 SINFRUT00000144121 BET1 homolog (Golgi vesicular membrane-trafficking protein p18) (hBET1). [Source:Uniprot/SWISSPROT;Acc:O15155]
16.7918 -13.9 0.0000103506 400 5 2 5 [+] picture button
SALL1 SINFRUT00000173074 Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like transcription factor 1) (HSal1). [Source:Uniprot/SWISSPROT;Acc:Q9NSC2]
16.0749 -12.16 0.0000111323 400 4 8 5 [+] picture button
KMO SINFRUT00000143708 Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase). [Source:Uniprot/SWISSPROT;Acc:O15229]
16.6254 -10.81 0.0000131103 400 5 2 6 [+] picture button
USP43 SINFRUT00000160761 Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.1.2.15) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43) (Deubiquitinating enzyme 43). [Source:Uniprot/SWISSPROT;Acc:Q70EL4]
16.0749 -9.55 0.0000199279 400 5 1 5 [+] picture button
RBM26 SINFRUT00000133187 RNA-binding protein 26 (RNA-binding motif protein 26) (CTCL tumor antigen se70-2). [Source:Uniprot/SWISSPROT;Acc:Q5T8P6]
15.8945 -14.33 0.0000223025 400 7 2 8 [+] picture button
SINFRUT00000181060 NOT ANNOTATED
19.1577 -18.4 0.0000228345 400 6 1 5 [+] picture button
GABRG2 SINFRUT00000159131 Gamma-aminobutyric-acid receptor subunit gamma-2 precursor (GABA(A) receptor subunit gamma-2). [Source:Uniprot/SWISSPROT;Acc:P18507]
16.3105 -11.08 0.0000228826 400 4 3 7 [+] picture button
SINFRUT00000179837 Homolog of Homo sapiens "Properdin precursor [Source:IPI;Acc:IPI00021364]"
17.1759 -10.97 0.0000344581 400 3 2 5 [+] picture button
TGM1 (1 of 2) SINFRUT00000155358 Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase). [Source:Uniprot/SWISSPROT;Acc:P22735]
18.8274 -17.13 0.0000350619 400 6 8 12 [+] picture button
Q9DES5_FUGRU SINFRUT00000166456 Methylthioadenosine phosphorylase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9DES5]
16.2092 -15.47 0.0000362092 400 3 2 5 [+] picture button
Q6I955_HUMAN SINFRUT00000137125 3-HSD 1 protein. [Source:Uniprot/SPTREMBL;Acc:Q6I955]
17.1759 -12.98 0.0000415843 400 2 2 3 [+] picture button
PDE7A SINFRUT00000155216 High-affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A (EC 3.1.4.17) (HCP1) (TM22). [Source:Uniprot/SWISSPROT;Acc:Q13946]
16.5977 -12.35 0.0000446279 400 8 3 12 [+] picture button
C18orf24 SINFRUT00000144182 Spindle and kinetochore-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96BD8]
16.9935 -19.18 0.000054319 400 2 1 3 [+] picture button
RAB13 SINFRUT00000131515 Ras-related protein Rab-13 (Cell growth-inhibiting gene 4 protein). [Source:Uniprot/SWISSPROT;Acc:P51153]
15.9648 -10.81 0.0000564816 400 8 2 10 [+] picture button
PXMP2 SINFRUT00000155101 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
16.0094 -10.49 0.000061044 400 6 2 10 [+] picture button
EGFLAM SINFRUT00000141769 EGF-like, fibronectin type III and laminin G domains isoform 3 [Source:RefSeq_peptide;Acc:NP_877951]
16.0749 -10.82 0.0000659355 400 7 2 8 [+] picture button
SRPX2 SINFRUT00000133054 Sushi repeat-containing protein SRPX2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60687]
15.7859 -8.53 0.0000668882 400 6 2 8 [+] picture button
ANXA4 SINFRUT00000178661 Annexin A4 (Annexin IV) (Lipocortin IV) (Endonexin I) (Chromobindin-4) (Protein II) (P32.5) (Placental anticoagulant protein II) (PAP-II) (PP4-X) (35-beta calcimedin) (Carbohydrate-binding protein P33/P41) (P33/41). [Source:Uniprot/SWISSPROT;Acc:P09525]
16.5153 -15.78 0.0000771388 400 8 2 10 [+] picture button
PCMTD1 SINFRUT00000129646 Protein-L-isoaspartate O-methyltransferase domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96MG8]
16.9023 -17.56 0.0000864304 400 5 9 8 [+] picture button
SINFRUT00000146204 Homolog of Homo sapiens "Potassium voltage-gated channel subfamily V member 2 [Source:IPI;Acc:IPI00152566]"
17.5062 -15.22 0.0000887225 400 4 2 4 [+] picture button
C6orf174 (2 of 2) SINFRUT00000136066 Uncharacterized protein C6orf174 precursor. [Source:Uniprot/SWISSPROT;Acc:Q5TF21]
16.7114 -13.66 0.0000969493 400 6 2 9 [+] picture button
KCNJ1 (1 of 2) SINFRUT00000163515 ATP-sensitive inward rectifier potassium channel 1 (Potassium channel, inwardly rectifying subfamily J member 1) (ATP-regulated potassium channel ROM-K) (Kir1.1). [Source:Uniprot/SWISSPROT;Acc:P48048]
16.6254 -14.18 0.000100972 400 8 1 6 [+] picture button
SLC10A7 SINFRUT00000157585 Sodium/bile acid cotransporter 7 (Na(+)/bile acid cotransporter 7) (Solute carrier family 10 member 7). [Source:Uniprot/SWISSPROT;Acc:Q0GE19]
15.7446 -17.03 0.000102525 400 3 1 5 [+] picture button
SINFRUT00000145939 Homolog of Homo sapiens "Splice Isoform 1 of Neuropilin and tolloid like-1 precursor [Source:IPI;Acc:IPI00171400]"
16.7473 -10.51 0.000115763 400 7 1 4 [+] picture button
SINFRUT00000181824 Homolog of Homo sapiens "Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:UniGene;Acc:Hs.546305]"
18.7173 -14.78 0.000120607 400 4 4 4 [+] picture button
AOF2 SINFRUT00000134467 Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Flavin-containing amine oxidase domain-containing protein 2) (BRAF35-HDAC complex protein BHC110). [Source:Uniprot/SWISSPROT;Acc:O60341]
16.0003 -12.75 0.000121154 400 5 1 6 [+] picture button
KIAA0196 (3 of 4) SINFRUT00000182660 Uncharacterized protein KIAA0196. [Source:Uniprot/SWISSPROT;Acc:Q12768]
17.0658 -8.52 0.000121555 400 6 2 10 [+] picture button
ARHGAP18 SINFRUT00000140351 Rho GTPase-activating protein 18 (MacGAP). [Source:Uniprot/SWISSPROT;Acc:Q8N392]
15.7446 -11.57 0.000121614 400 4 2 12 [+] picture button
SINFRUT00000164847 Homolog of Homo sapiens "CaM kinase-like vesicle-associated [Source:RefSeq_peptide;Acc:NP_076951]"
16.9557 -18.58 0.000122299 400 2 4 2 [+] picture button
NALCN SINFRUT00000134627 voltage gated channel like 1 [Source:RefSeq_peptide;Acc:NP_443099]
16.4052 -17.73 0.000125585 400 4 3 7 [+] picture button
CAP2 SINFRUT00000163371 Adenylyl cyclase-associated protein 2 (CAP 2). [Source:Uniprot/SWISSPROT;Acc:P40123]
15.8547 -13.68 0.000130659 400 8 2 15 [+] picture button
JAK2 (1 of 2) SINFRUT00000156501 Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2). [Source:Uniprot/SWISSPROT;Acc:O60674]
16.2951 -11.58 0.000133594 400 8 3 14 [+] picture button
CLIP4 SINFRUT00000138713 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
15.9098 -11.69 0.000139854 400 6 9 17 [+] picture button
TWSG1 SINFRUT00000156028 Twisted gastrulation protein homolog 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9GZX9]
16.8205 -19.36 0.000154906 400 7 3 8 [+] picture button
RAB30 SINFRUT00000151086 Ras-related protein Rab-30. [Source:Uniprot/SWISSPROT;Acc:Q15771]
17.3961 -21.51 0.000160919 400 9 3 12 [+] picture button

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Download table: GFF TXT
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