spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cel-miR-76

137 hits found.


Page 1 of 3
1 2 3 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
CBG08372 ENSCBRT00000013045 F13B12.2 [Source:RefSeq_peptide;Acc:NP_501925]F13B12.2 [Source:RefSeq_peptide;Acc:NP_501925] BY ORTHOLOGY TO:F13B12.2
16.0402 -16.91 0.000124909 1300 3 1 1 [+] picture button
CBG04327 ENSCBRT00000007697 T19D12.5 [Source:RefSeq_peptide;Acc:NP_495349]T19D12.5 [Source:RefSeq_peptide;Acc:NP_495349] BY ORTHOLOGY TO:T19D12.5
17.0739 -22.46 0.000422853 1300 3 1 3 [+] picture button
CBG12201 ENSCBRT00000013258 ZK596.2 [Source:RefSeq_peptide;Acc:NP_502028]ZK596.2 [Source:RefSeq_peptide;Acc:NP_502028] BY ORTHOLOGY TO:ZK596.2
15.8371 -18.04 0.000694441 1300 4 1 3 [+] picture button
CBG07619 ENSCBRT00000011110 ocr-3 encodes a predicted TRPV channel (transient receptor potential cation channel, subfamily V) containing six membrane-spanning regions, cytoplasmic ankyrin repeats, and a long, unconserved cytoplasmic tail that is related to the mammalian TRPV1 cation channel (OMIM:602076) activated by capsaicin and other noxious stimuli. although the precise role of OCR-3 in C. elegans development and/or behavior is not yet known, OCR-3 expression is detected solely in the rectal gland cells and occasionally the glial socket cells of the head, suggesting that OCR-3 may function in sensory signal transduction in these cell types. [Source: WormBase]ocr-3 encodes a predicted TRPV channel (transient receptor potential cation channel, subfamily V) containing six membrane-spanning regions, cytoplasmic ankyrin repeats, and a long, unconserved cytoplasmic tail that is related to the mammalian TRPV1 cation channel (OMIM:602076) activated by capsaicin and other noxious stimuli. although the precise role of OCR-3 in C. elegans development and/or behavior is not yet known, OCR-3 expression is detected solely in the rectal gland cells and occasionally the glial socket cells of the head, suggesting that OCR-3 may function in sensory signal transduction in these cell types. [Source: WormBase] BY ORTHOLOGY TO:T10B10.7
16.5112 -24.02 0.000821474 1300 4 2 4 [+] picture button
CBG13563 ENSCBRT00000007743 COLlagen family member (col-107) [Source:RefSeq_peptide;Acc:NP_872105]COLlagen family member (col-107) [Source:RefSeq_peptide;Acc:NP_872105] BY ORTHOLOGY TO:C34H4.4a
16.5673 -15.98 0.000879032 1300 4 1 3 [+] picture button
CBG02562 ENSCBRT00000007565 R12C12.9a [Source:RefSeq_peptide;Acc:NP_495203]R12C12.9a [Source:RefSeq_peptide;Acc:NP_495203] BY ORTHOLOGY TO:R12C12.9b
16.4935 -15.92 0.00103257 1300 7 2 5 [+] picture button
CBG07024 ENSCBRT00000012400 B0432.6 [Source:RefSeq_peptide;Acc:NP_493689]B0432.6 [Source:RefSeq_peptide;Acc:NP_493689] BY ORTHOLOGY TO:B0432.6
16.3272 -14.25 0.00119728 1300 2 1 1 [+] picture button
CBG19015 ENSCBRT00000014085 Serpentine Receptor, class H family member (srh-30) [Source:RefSeq_peptide;Acc:NP_504714]Serpentine Receptor, class H family member (srh-30) [Source:RefSeq_peptide;Acc:NP_504714] BY ORTHOLOGY TO:ZC404.12
16.275 -19.35 0.00164283 1300 3 1 3 [+] picture button
CBG17937 ENSCBRT00000000466 Y5H2B.1 [Source:RefSeq_peptide;Acc:NP_503601]Y5H2B.1 [Source:RefSeq_peptide;Acc:NP_503601] BY ORTHOLOGY TO:Y5H2B.1
15.9649 -20.35 0.0022157 1300 3 1 3 [+] picture button
CBG00692 ENSCBRT00000003157 Regulator of chromosome condensation (Cell cycle regulatory protein) (RCC1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q18211]Regulator of chromosome condensation (Cell cycle regulatory protein) (RCC1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q18211] BY ORTHOLOGY TO:C26D10.1
16.3235 -13.3 0.00247747 1300 3 1 3 [+] picture button
CBG17020 ENSCBRT00000011920 ZK105.6 [Source:RefSeq_peptide;Acc:NP_504998]ZK105.6 [Source:RefSeq_peptide;Acc:NP_504998] BY ORTHOLOGY TO:ZK105.6
15.5773 -13.53 0.00256157 1300 2 1 7 [+] picture button
CBG12702 ENSCBRT00000014341 T23B3.4 [Source:RefSeq_peptide;Acc:NP_491918]T23B3.4 [Source:RefSeq_peptide;Acc:NP_491918] BY ORTHOLOGY TO:T23B3.4
16.3278 -9.25 0.00325383 1300 6 2 8 [+] picture button
CBG23795 ENSCBRT00000005456 polymerase (DNA directed), alpha 2 (70kD subunit) [Source:RefSeq_peptide;Acc:NP_001019713]polymerase (DNA directed), alpha 2 (70kD subunit) [Source:RefSeq_peptide;Acc:NP_001019713] BY ORTHOLOGY TO:ENSBTAT00000015221
16.4443 -23.6 0.0039629 1300 3 1 2 [+] picture button
CBG08248 ENSCBRT00000003528 F20G4.2 [Source:RefSeq_peptide;Acc:NP_492184]F20G4.2 [Source:RefSeq_peptide;Acc:NP_492184] BY ORTHOLOGY TO:F20G4.2
15.9523 -27.03 0.00399832 1300 3 1 3 [+] picture button
CBG11402 ENSCBRT00000013998 Y97E10AR.2b [Source:RefSeq_peptide;Acc:NP_001024294]Y97E10AR.2b [Source:RefSeq_peptide;Acc:NP_001024294] BY ORTHOLOGY TO:Y97E10AR.2a
15.5918 -25.27 0.00485301 1300 3 1 3 [+] picture button
CBG02851 ENSCBRT00000006221 F07A11.1 [Source:RefSeq_peptide;Acc:NP_496478]F07A11.1 [Source:RefSeq_peptide;Acc:NP_496478] BY ORTHOLOGY TO:F07A11.1
15.6247 -19.64 0.0049453 1300 5 1 8 [+] picture button
CBG20615 ENSCBRT00000001415 Toxin-regulated Target of p38MAPK family member (ttm-2) [Source:RefSeq_peptide;Acc:NP_494855]Toxin-regulated Target of p38MAPK family member (ttm-2) [Source:RefSeq_peptide;Acc:NP_494855] BY ORTHOLOGY TO:F26G1.4
15.6022 -16.59 0.00547504 1300 2 2 2 [+] picture button
CBG23448 ENSCBRT00000011564 FERM domain (protein4.1-ezrin-radixin-moesin) family member (frm-7) [Source:RefSeq_peptide;Acc:NP_506085]FERM domain (protein4.1-ezrin-radixin-moesin) family member (frm-7) [Source:RefSeq_peptide;Acc:NP_506085] BY ORTHOLOGY TO:C51F7.1
17.8749 -23.58 0.00582559 1300 3 1 3 [+] picture button
CBG09113 ENSCBRT00000008531 Dual specificity protein phosphatase 22 (EC 3.1.3.48) (EC 3.1.3.16) (JNK-stimulatory phosphatase-1) (JSP-1) (Mitogen-activated protein kinase phosphatase x) (LMW-DSP2). [Source:Uniprot/SWISSPROT;Acc:Q9NRW4]Dual specificity protein phosphatase 22 (EC 3.1.3.48) (EC 3.1.3.16) (JNK-stimulatory phosphatase-1) (JSP-1) (Mitogen-activated protein kinase phosphatase x) (LMW-DSP2). [Source:Uniprot/SWISSPROT;Acc:Q9NRW4] BY ORTHOLOGY TO:ENSGALT00000020924
15.5139 -12.7 0.00610089 1300 2 1 3 [+] picture button
CBG15791 ENSCBRT00000012163 F54F12.2 [Source:RefSeq_peptide;Acc:NP_499708]F54F12.2 [Source:RefSeq_peptide;Acc:NP_499708] BY ORTHOLOGY TO:F54F12.2
17.8099 -20.38 0.00626153 1300 8 1 7 [+] picture button
CBG16354 ENSCBRT00000011242 K08B5.2 [Source:RefSeq_peptide;Acc:NP_510682]K08B5.2 [Source:RefSeq_peptide;Acc:NP_510682] BY ORTHOLOGY TO:K08B5.2
15.5058 -17.76 0.00709536 1300 3 1 3 [+] picture button
CBG00593 ENSCBRT00000003326 Putative protein tag-256. [Source:Uniprot/SWISSPROT;Acc:P30639]Putative protein tag-256. [Source:Uniprot/SWISSPROT;Acc:P30639] BY ORTHOLOGY TO:ZK637.3
17.5293 -22.63 0.00854507 1300 4 1 6 [+] picture button
CBG20099 ENSCBRT00000000632 THaumatiN family member (thn-5) [Source:RefSeq_peptide;Acc:NP_500748]THaumatiN family member (thn-5) [Source:RefSeq_peptide;Acc:NP_500748] BY ORTHOLOGY TO:Y59E9AR.4
15.3615 -20.55 0.00904209 1300 2 1 3 [+] picture button
CBG22236 ENSCBRT00000003689 B0041.3 [Source:RefSeq_peptide;Acc:NP_491415]B0041.3 [Source:RefSeq_peptide;Acc:NP_491415] BY ORTHOLOGY TO:B0041.3
17.4549 -25.41 0.0092778 1300 6 2 10 [+] picture button
CBG07422 ENSCBRT00000011082 R01E6.6 [Source:RefSeq_peptide;Acc:NP_510267]R01E6.6 [Source:RefSeq_peptide;Acc:NP_510267] BY ORTHOLOGY TO:R01E6.6
15.4953 -17.26 0.00937574 1300 5 1 4 [+] picture button
CBG23909 ENSCBRT00000008170 F56B3.6 [Source:RefSeq_peptide;Acc:NP_499990]F56B3.6 [Source:RefSeq_peptide;Acc:NP_499990] BY ORTHOLOGY TO:F56B3.6
15.3711 -18.05 0.0100968 1300 2 1 2 [+] picture button
CBG01947 ENSCBRT00000005801 G protein-coupled receptor kinase 1 (EC 2.7.11.16). [Source:Uniprot/SWISSPROT;Acc:Q09537]G protein-coupled receptor kinase 1 (EC 2.7.11.16). [Source:Uniprot/SWISSPROT;Acc:Q09537] BY ORTHOLOGY TO:F19C6.1
15.6867 -13.15 0.0101581 1300 3 2 3 [+] picture button
CBG15734 ENSCBRT00000012049 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL003997-RA
17.3587 -20.05 0.0103188 1300 6 1 5 [+] picture button
CBG04502 ENSCBRT00000008807 F57C7.5 [Source:RefSeq_peptide;Acc:NP_509773]F57C7.5 [Source:RefSeq_peptide;Acc:NP_509773] BY ORTHOLOGY TO:F57C7.5
17.3569 -24.73 0.010339 1300 5 1 5 [+] picture button
CBG22805 ENSCBRT00000004267 F18E9.3 [Source:RefSeq_peptide;Acc:NP_509455]F18E9.3 [Source:RefSeq_peptide;Acc:NP_509455] BY ORTHOLOGY TO:F18E9.3
17.3478 -21.32 0.0104438 1300 4 1 4 [+] picture button
CBG02368 ENSCBRT00000006657 gcy-12 encodes a predicted guanylate cyclase that affects chemotaxis to isoamyl alcohol. expressed in PHA neurons and in AFD neurons. [Source: WormBase]gcy-12 encodes a predicted guanylate cyclase that affects chemotaxis to isoamyl alcohol. expressed in PHA neurons and in AFD neurons. [Source: WormBase] BY ORTHOLOGY TO:F08B1.2
15.3004 -16.22 0.0106079 1300 5 1 6 [+] picture button
CBG19322 ENSCBRT00000013515 T06E4.8 [Source:RefSeq_peptide;Acc:NP_505482]T06E4.8 [Source:RefSeq_peptide;Acc:NP_505482] BY ORTHOLOGY TO:T06E4.8
15.7877 -15.13 0.010856 1300 3 2 4 [+] picture button
CBG09695 ENSCBRT00000005734 F28H7.8 [Source:RefSeq_peptide;Acc:NP_505746]F28H7.8 [Source:RefSeq_peptide;Acc:NP_505746] BY ORTHOLOGY TO:F28H7.8
17.2625 -16.99 0.0114753 1300 2 1 2 [+] picture button
CBG24724 ENSCBRT00000002793 ZC443.5 [Source:RefSeq_peptide;Acc:NP_506209]ZC443.5 [Source:RefSeq_peptide;Acc:NP_506209] BY ORTHOLOGY TO:ZC443.5
15.5834 -19.27 0.0116801 1300 4 1 4 [+] picture button
CBG08341 ENSCBRT00000012943 T07G12.2 [Source:RefSeq_peptide;Acc:NP_501944]T07G12.2 [Source:RefSeq_peptide;Acc:NP_501944] BY ORTHOLOGY TO:T07G12.2
17.1637 -21.85 0.0127966 1300 2 1 2 [+] picture button
CBG04788 ENSCBRT00000010596 Seven TM Receptor family member (str-118) [Source:RefSeq_peptide;Acc:NP_505581]Seven TM Receptor family member (str-118) [Source:RefSeq_peptide;Acc:NP_505581] BY ORTHOLOGY TO:F57A8.3
17.0356 -24.33 0.0147345 1300 5 1 7 [+] picture button
CBG06656 ENSCBRT00000009672 Serpentine Receptor, class X family member (srx-41) [Source:RefSeq_peptide;Acc:NP_504021]Serpentine Receptor, class X family member (srx-41) [Source:RefSeq_peptide;Acc:NP_504021] BY ORTHOLOGY TO:F59B1.7
17.0235 -25.64 0.0149311 1300 2 1 3 [+] picture button
CBG11503 ENSCBRT00000013827 C10C6.3 [Source:RefSeq_peptide;Acc:NP_502163]C10C6.3 [Source:RefSeq_peptide;Acc:NP_502163] BY ORTHOLOGY TO:C10C6.3
16.9867 -22.15 0.0155483 1300 3 1 3 [+] picture button
CBG09519 ENSCBRT00000005966 C08B6.3 [Source:RefSeq_peptide;Acc:NP_505599]C08B6.3 [Source:RefSeq_peptide;Acc:NP_505599] BY ORTHOLOGY TO:C08B6.3
16.9404 -21.48 0.01636 1300 3 1 2 [+] picture button
CBG19300 ENSCBRT00000013498 mTERF domain-containing protein 1, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96E29]mTERF domain-containing protein 1, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96E29] BY ORTHOLOGY TO:ENSMODT00000008805
16.9112 -19.95 0.0168923 1300 5 1 5 [+] picture button
CBG00515 ENSCBRT00000003057 CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]. [Source:Uniprot/SWISSPROT;Acc:P27708]CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]. [Source:Uniprot/SWISSPROT;Acc:P27708] BY ORTHOLOGY TO:ENSORLT00000010927
16.8765 -20.2 0.0175483 1300 3 1 3 [+] picture button
CBG03399 ENSCBRT00000007164 Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2). [Source:Uniprot/SWISSPROT;Acc:P28192]Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2). [Source:Uniprot/SWISSPROT;Acc:P28192] BY ORTHOLOGY TO:K04D7.4
16.8597 -25.6 0.017874 1300 3 2 4 [+] picture button
ENSCBRT00000001017 Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). [Source:Uniprot/SWISSPROT;Acc:P13051]Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). [Source:Uniprot/SWISSPROT;Acc:P13051] BY ORTHOLOGY TO:SINFRUT00000155102
16.8332 -16.7 0.0184016 1300 5 1 4 [+] picture button
CBG04128 ENSCBRT00000010048 crs-1 encodes a predicted cytoplasmic cysteinyl-tRNA synthetase (CysRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of cysteine to its cognate tRNA and is thus required for protein biosynthesis. CRS-1 is essential for embryonic and larval development, and is required for molting and a normal rate of postembryonic development. [Source: WormBase]crs-1 encodes a predicted cytoplasmic cysteinyl-tRNA synthetase (CysRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of cysteine to its cognate tRNA and is thus required for protein biosynthesis. CRS-1 is essential for embryonic and larval development, and is required for molting and a normal rate of postembryonic development. [Source: WormBase] BY ORTHOLOGY TO:Y23H5A.7b
16.8281 -16.44 0.0185041 1300 10 1 14 [+] picture button
CBG24357 ENSCBRT00000009777 F28G4.4 [Source:RefSeq_peptide;Acc:NP_507111]F28G4.4 [Source:RefSeq_peptide;Acc:NP_507111] BY ORTHOLOGY TO:F28G4.4
16.8281 -13.01 0.0185041 1300 3 1 6 [+] picture button
CBG09895 ENSCBRT00000008086 Importin-13 (Imp13) (Ran-binding protein 13) (RanBP13) (Karyopherin 13) (Kap13). [Source:Uniprot/SWISSPROT;Acc:O94829]Importin-13 (Imp13) (Ran-binding protein 13) (RanBP13) (Karyopherin 13) (Kap13). [Source:Uniprot/SWISSPROT;Acc:O94829] BY ORTHOLOGY TO:ENST00000372343
16.8082 -27.81 0.0189107 1300 3 1 3 [+] picture button
CBG08983 ENSCBRT00000008491 F09F7.1 [Source:RefSeq_peptide;Acc:NP_498195]F09F7.1 [Source:RefSeq_peptide;Acc:NP_498195] BY ORTHOLOGY TO:F09F7.1
16.8055 -26.28 0.0189684 1300 4 1 4 [+] picture button
CBG01058 ENSCBRT00000002300 Protein BAT4 homolog. [Source:Uniprot/SWISSPROT;Acc:Q09655]Protein BAT4 homolog. [Source:Uniprot/SWISSPROT;Acc:Q09655] BY ORTHOLOGY TO:ZK1320.7
16.7821 -18.58 0.0194591 1300 3 1 3 [+] picture button
CBG23800 ENSCBRT00000005463 CG33249-PA [Source:RefSeq_peptide;Acc:NP_996434]CG33249-PA [Source:RefSeq_peptide;Acc:NP_996434] BY ORTHOLOGY TO:CG33249-RA
16.7723 -19.73 0.0196689 1300 2 1 2 [+] picture button
CBG05965 ENSCBRT00000009039 Serpentine Receptor, class I family member (sri-19) [Source:RefSeq_peptide;Acc:NP_502043]Serpentine Receptor, class I family member (sri-19) [Source:RefSeq_peptide;Acc:NP_502043] BY ORTHOLOGY TO:Y69E1A.6
16.7622 -14.83 0.0198872 1300 6 2 6 [+] picture button

Page 1 of 3
1 2 3 next >>

Download table: GFF TXT
spacer
spacer