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Target Listing


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Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cel-miR-54

238 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG15673 ENSCBRT00000011956 H14E04.2b [Source:RefSeq_peptide;Acc:NP_497544]H14E04.2b [Source:RefSeq_peptide;Acc:NP_497544] BY ORTHOLOGY TO:H14E04.2d
16.9847 -26.01 0.000013248 1300 3 1 7 [+] picture button
CBG04379 ENSCBRT00000007706 F32B4.8 [Source:RefSeq_peptide;Acc:NP_492939]F32B4.8 [Source:RefSeq_peptide;Acc:NP_492939] BY ORTHOLOGY TO:F32B4.8
14.6036 -13.51 0.0000448826 1300 3 1 3 [+] picture button
CBG20729 ENSCBRT00000001477 Nuclear Hormone Receptor family member (nhr-170) [Source:RefSeq_peptide;Acc:NP_507673]Nuclear Hormone Receptor family member (nhr-170) [Source:RefSeq_peptide;Acc:NP_507673] BY ORTHOLOGY TO:C54E10.5
15.609 -21.06 0.0000731654 1300 7 1 9 [+] picture button
CBG06244 ENSCBRT00000008204 Neurexin Like receptor family member (nlr-1) [Source:RefSeq_peptide;Acc:NP_502312]Neurexin Like receptor family member (nlr-1) [Source:RefSeq_peptide;Acc:NP_502312] BY ORTHOLOGY TO:F20B10.1
14.4456 -20.9 0.000125691 1300 3 2 5 [+] picture button
CBG02028 ENSCBRT00000005876 B0410.3 [Source:RefSeq_peptide;Acc:NP_508502]B0410.3 [Source:RefSeq_peptide;Acc:NP_508502] BY ORTHOLOGY TO:B0410.3
16.147 -19.82 0.000212438 1300 3 2 9 [+] picture button
CBG22419 ENSCBRT00000004923 Serpentine Receptor, class J family member (srj-9) [Source:RefSeq_peptide;Acc:NP_503963]Serpentine Receptor, class J family member (srj-9) [Source:RefSeq_peptide;Acc:NP_503963] BY ORTHOLOGY TO:T20C4.1
16.1636 -22.37 0.00030617 1300 3 1 9 [+] picture button
CBG09670 ENSCBRT00000005777 twk-12 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. as loss of TWK-12 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-12 in C. elegans development and/or behavior is not yet known. TWK-12 may, however, function redundantly with other TWK channels. the TWK-12 expression pattern has not been determined. [Source: WormBase]twk-12 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. as loss of TWK-12 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-12 in C. elegans development and/or behavior is not yet known. TWK-12 may, however, function redundantly with other TWK channels. the TWK-12 expression pattern has not been determined. [Source: WormBase] BY ORTHOLOGY TO:F29F11.4
15.5805 -14.63 0.000387838 1300 1 1 5 [+] picture button
CBG20204 ENSCBRT00000000814 C03C10.6 [Source:RefSeq_peptide;Acc:NP_497817]C03C10.6 [Source:RefSeq_peptide;Acc:NP_497817] BY ORTHOLOGY TO:C03C10.6
15.5375 -14.72 0.000461636 1300 2 2 6 [+] picture button
CBG22453 ENSCBRT00000004897 Y37A1A.2 [Source:RefSeq_peptide;Acc:NP_502676]Y37A1A.2 [Source:RefSeq_peptide;Acc:NP_502676] BY ORTHOLOGY TO:Y37A1A.2
15.346 -18.91 0.000624629 1300 5 1 10 [+] picture button
CBG03891 ENSCBRT00000008718 abt-2 encodes a predicted ATP-binding cassette (ABC) transporter that is a member of the ABCA subfamily of transport proteins. ABT-2 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of abt-2 activity via RNAi results in no obvious defects, the precise role of abt-2 in C. elegans development and/or behavior is not yet known. [Source: WormBase]abt-2 encodes a predicted ATP-binding cassette (ABC) transporter that is a member of the ABCA subfamily of transport proteins. ABT-2 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of abt-2 activity via RNAi results in no obvious defects, the precise role of abt-2 in C. elegans development and/or behavior is not yet known. [Source: WormBase] BY ORTHOLOGY TO:F12B6.1
15.5405 -15.17 0.000759606 1300 6 1 11 [+] picture button
CBG12089 ENSCBRT00000011644 Probable mitochondrial 28S ribosomal protein S6 (MRP-S6). [Source:Uniprot/SWISSPROT;Acc:Q9VZD5]Probable mitochondrial 28S ribosomal protein S6 (MRP-S6). [Source:Uniprot/SWISSPROT;Acc:Q9VZD5] BY ORTHOLOGY TO:CG15016-RA
15.2425 -15.24 0.000869188 1300 5 1 10 [+] picture button
CBG11009 ENSCBRT00000001186 unc-10 encodes a protein with zinc-finger, Q/N-rich, PDZ, and C2 domains that is homologous to vertebrate Rim1, a presynaptic protein which binds, and effects the activity of, synaptic vesicle-associated GTP-Rab3. UNC-10 is required for normal locomotion and synaptic transmission, and localizes to a subdomain of presynaptic termini, where it probably acts to regulate the priming step of presynaptic vesicle fusion by promoting conformational changes in syntaxin. [Source: WormBase]unc-10 encodes a protein with zinc-finger, Q/N-rich, PDZ, and C2 domains that is homologous to vertebrate Rim1, a presynaptic protein which binds, and effects the activity of, synaptic vesicle-associated GTP-Rab3. UNC-10 is required for normal locomotion and synaptic transmission, and localizes to a subdomain of presynaptic termini, where it probably acts to regulate the priming step of presynaptic vesicle fusion by promoting conformational changes in syntaxin. [Source: WormBase] BY ORTHOLOGY TO:T10A3.1a
15.2582 -19.97 0.000913389 1300 3 2 9 [+] picture button
CBG02766 ENSCBRT00000006053 ptr-18 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome). PTR-18 is strongly required for normal molting from L3 to adult stage (a role conserved in C. briggsae). PTR-18 is also required for male tail development and vulval morphogenesis, and (partly) for endocytosis of yolk by oocytes. [Source: WormBase]ptr-18 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome). PTR-18 is strongly required for normal molting from L3 to adult stage (a role conserved in C. briggsae). PTR-18 is also required for male tail development and vulval morphogenesis, and (partly) for endocytosis of yolk by oocytes. [Source: WormBase] BY ORTHOLOGY TO:Y38F1A.3
15.1842 -17.78 0.000926886 1300 4 2 8 [+] picture button
CBG07102 ENSCBRT00000012070 Zinc metalloproteinase nas-27 precursor (EC 3.4.24.21) (Nematode astacin 27). [Source:Uniprot/SWISSPROT;Acc:O17264]Zinc metalloproteinase nas-27 precursor (EC 3.4.24.21) (Nematode astacin 27). [Source:Uniprot/SWISSPROT;Acc:O17264] BY ORTHOLOGY TO:T23F4.4
16.0822 -20.7 0.000980533 1300 3 1 4 [+] picture button
CBG09585 ENSCBRT00000005913 CRiM (Cysteine RIch motor neuron protein) homolog family member (crm-1) [Source:RefSeq_peptide;Acc:NP_741616]CRiM (Cysteine RIch motor neuron protein) homolog family member (crm-1) [Source:RefSeq_peptide;Acc:NP_741616] BY ORTHOLOGY TO:B0024.14d
15.1808 -21.77 0.00103468 1300 4 1 9 [+] picture button
CBG04600 ENSCBRT00000010489 R02D5.3 [Source:RefSeq_peptide;Acc:NP_506593]R02D5.3 [Source:RefSeq_peptide;Acc:NP_506593] BY ORTHOLOGY TO:R02D5.3
15.5769 -20.75 0.00114632 1300 5 1 6 [+] picture button
CBG06961 ENSCBRT00000012289 ptr-3 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome). PTR-3 is weakly required for normal molting from L4 to adult stages. PTR-3 is also required for normal adult alae formation, growth to full size, and vulval morphogenesis. [Source: WormBase]ptr-3 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome). PTR-3 is weakly required for normal molting from L4 to adult stages. PTR-3 is also required for normal adult alae formation, growth to full size, and vulval morphogenesis. [Source: WormBase] BY ORTHOLOGY TO:C41D7.2
15.0055 -15.96 0.00129296 1300 1 2 6 [+] picture button
CBG23839 ENSCBRT00000006756 F14B6.2 [Source:RefSeq_peptide;Acc:NP_493085]F14B6.2 [Source:RefSeq_peptide;Acc:NP_493085] BY ORTHOLOGY TO:F14B6.2
16.1319 -16.92 0.00134955 1300 2 2 5 [+] picture button
CBG19235 ENSCBRT00000013442 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL003244-RA
15.4943 -15.86 0.00136299 1300 3 2 5 [+] picture button
CBG23158 ENSCBRT00000012091 gly-20 is orthologous to the human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2. OMIM:602616), which when mutated leads to carbohydrate-deficient glycoprotein syndrome, type II. [Source: WormBase]gly-20 is orthologous to the human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2. OMIM:602616), which when mutated leads to carbohydrate-deficient glycoprotein syndrome, type II. [Source: WormBase] BY ORTHOLOGY TO:C03E10.4
15.4748 -16.88 0.00139939 1300 1 2 7 [+] picture button
CBG17628 ENSCBRT00000002169 R13.2 [Source:RefSeq_peptide;Acc:NP_502006]R13.2 [Source:RefSeq_peptide;Acc:NP_502006] BY ORTHOLOGY TO:R13.2
14.8907 -20.54 0.00141203 1300 6 1 10 [+] picture button
CBG19308 ENSCBRT00000013505 F25B3.1 [Source:RefSeq_peptide;Acc:NP_505468]F25B3.1 [Source:RefSeq_peptide;Acc:NP_505468] BY ORTHOLOGY TO:F25B3.1
15.3515 -13.53 0.00144896 1300 6 2 13 [+] picture button
CBG17739 ENSCBRT00000000175 C26B2.7 [Source:RefSeq_peptide;Acc:NP_501342]C26B2.7 [Source:RefSeq_peptide;Acc:NP_501342] BY ORTHOLOGY TO:C26B2.7
14.8981 -16.09 0.00153839 1300 6 2 7 [+] picture button
CBG11315 ENSCBRT00000014394 C16D9.6 [Source:RefSeq_peptide;Acc:NP_505126]C16D9.6 [Source:RefSeq_peptide;Acc:NP_505126] BY ORTHOLOGY TO:C16D9.6
14.9548 -13.93 0.00160721 1300 2 2 8 [+] picture button
CBG05569 ENSCBRT00000005379 grl-14 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. GRL-14 is expressed in intestine, head mesodermal cell, hypodermis, seam cells, and uterine muscle, larval arcade cells and reproductive system, and the developing vulva. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase]grl-14 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. GRL-14 is expressed in intestine, head mesodermal cell, hypodermis, seam cells, and uterine muscle, larval arcade cells and reproductive system, and the developing vulva. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase] BY ORTHOLOGY TO:T03D8.4
14.9785 -22.95 0.00183028 1300 6 2 13 [+] picture button
CBG02229 ENSCBRT00000004962 UPF0392 protein F59C6.8. [Source:Uniprot/SWISSPROT;Acc:Q93834]UPF0392 protein F59C6.8. [Source:Uniprot/SWISSPROT;Acc:Q93834] BY ORTHOLOGY TO:F59C6.8
15.0192 -19.29 0.0018675 1300 8 2 14 [+] picture button
CBG05683 ENSCBRT00000005318 F59A1.10 [Source:RefSeq_peptide;Acc:NP_507469]F59A1.10 [Source:RefSeq_peptide;Acc:NP_507469] BY ORTHOLOGY TO:F59A1.10
14.7948 -13.67 0.00188946 1300 3 2 9 [+] picture button
CBG03484 ENSCBRT00000007237 blue cheese CG14001-PA [Source:RefSeq_peptide;Acc:NP_608968]blue cheese CG14001-PA [Source:RefSeq_peptide;Acc:NP_608968] BY ORTHOLOGY TO:CG14001-RA
14.9874 -13.39 0.00206898 1300 3 1 5 [+] picture button
CBG02358 ENSCBRT00000006663 ptr-6 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins. PTR-6 is weakly required for normal molting from L4 to adult stages. however, PTR-6 in conjunction with PTR-1 and PTR-10 is strongly required for both molting and viability, with triple ptr-1/-6/-10 RNAi animals showing pronounced molting defects and lethality. PTR-6 is also required for normal growth to full size and locomotion. [Source: WormBase]ptr-6 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins. PTR-6 is weakly required for normal molting from L4 to adult stages. however, PTR-6 in conjunction with PTR-1 and PTR-10 is strongly required for both molting and viability, with triple ptr-1/-6/-10 RNAi animals showing pronounced molting defects and lethality. PTR-6 is also required for normal growth to full size and locomotion. [Source: WormBase] BY ORTHOLOGY TO:C54A12.1
14.7876 -14.63 0.00212084 1300 3 2 8 [+] picture button
CBG24280 ENSCBRT00000007810 TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (Dr1 protein) (Negative cofactor 2 beta) (NC2 beta). [Source:Uniprot/SWISSPROT;Acc:Q01658]TATA-binding protein-associated phosphoprotein (Down-regulator of transcription 1) (Dr1 protein) (Negative cofactor 2 beta) (NC2 beta). [Source:Uniprot/SWISSPROT;Acc:Q01658] BY ORTHOLOGY TO:SINFRUT00000136643
14.7923 -19.78 0.00212722 1300 4 2 7 [+] picture button
CBG05703 ENSCBRT00000009202 H20E11.1a [Source:RefSeq_peptide;Acc:NP_001023259]H20E11.1a [Source:RefSeq_peptide;Acc:NP_001023259] BY ORTHOLOGY TO:H20E11.1a
14.7084 -13.48 0.00237297 1300 1 1 6 [+] picture button
CBG18819 ENSCBRT00000012679 kal-1 encodes a cell surface protein that contains a WAP-type protease inhibitor domain and Type III fibronectin domains and is the C. elegans ortholog of human KAL-1, mutated in the X-linked form of the neurological disorder Kallmann syndrome. in C. elegans, both kal-1 loss-of-function mutations and kal-1 overexpression result in similar phenotypes that indicate KAL-1 activity is required for epithelial morphogenesis and axon branching. kal-1 transcriptional reporters reveal expression beginning in the 50-cell stage embryo in 2-3 cells with later embryonic expression in at least 8-10 AB-derived ventral neuroblasts that are a substrate for migrating epidermal cells during ventral enclosure. later expression in larvae and adults is restricted to anterior neurons, including AIY, AIZ, RID, M5, ASI, and labial sensory neurons, ventral nerve cord motorneurons, midbody neurons HSN, CAN, and PVM, tail neurons DVB, DVC, and PDB, and the nonneuronal excretory cell as well as in uterine muscles. in the AIY interneurons, kal-1 is part of a gene battery whose expression is under the control of the CEH-10 and TTX-3 Paired and LIM-type homeodomains, respectively. [Source: WormBase]kal-1 encodes a cell surface protein that contains a WAP-type protease inhibitor domain and Type III fibronectin domains and is the C. elegans ortholog of human KAL-1, mutated in the X-linked form of the neurological disorder Kallmann syndrome. in C. elegans, both kal-1 loss-of-function mutations and kal-1 overexpression result in similar phenotypes that indicate KAL-1 activity is required for epithelial morphogenesis and axon branching. kal-1 transcriptional reporters reveal expression beginning in the 50-cell stage embryo in 2-3 cells with later embryonic expression in at least 8-10 AB-derived ventral neuroblasts that are a substrate for migrating epidermal cells during ventral enclosure. later expression in larvae and adults is restricted to anterior neurons, including AIY, AIZ, RID, M5, ASI, and labial sensory neurons, ventral nerve cord motorneurons, midbody neurons HSN, CAN, and PVM, tail neurons DVB, DVC, and PDB, and the nonneuronal excretory cell as well as in uterine muscles. in the AIY interneurons, kal-1 is part of a gene battery whose expression is under the control of the CEH-10 and TTX-3 Paired and LIM-type homeodomains, respectively. [Source: WormBase] BY ORTHOLOGY TO:K03D10.1
15.9714 -20.98 0.00257792 1300 2 1 7 [+] picture button
CBG06460 ENSCBRT00000010953 C31B8.7 [Source:RefSeq_peptide;Acc:NP_503789]C31B8.7 [Source:RefSeq_peptide;Acc:NP_503789] BY ORTHOLOGY TO:C31B8.7
14.6886 -16.52 0.00257792 1300 2 1 5 [+] picture button
CBG17774 ENSCBRT00000000205 F18A12.8 encodes two isoforms of a neprilysin. neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them. F18A12.8A is closely paralogous to ZK20.6, and orthologous to CG9761 in Drosophila melanogaster. F18A12.8 is homologous, and possibly orthologous, to human ECE1 (OMIM:600423. mutation leads to Hirschsprung disease, cardiac defects, and autonomic dysfunction). more generally, F18A12.8A falls into a group of proteins that includes the classical neprilysins found in mammals (e.g., PEX [OMIM:307800] and the enkephalin cleaving enzymes). [Source: WormBase]F18A12.8 encodes two isoforms of a neprilysin. neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them. F18A12.8A is closely paralogous to ZK20.6, and orthologous to CG9761 in Drosophila melanogaster. F18A12.8 is homologous, and possibly orthologous, to human ECE1 (OMIM:600423. mutation leads to Hirschsprung disease, cardiac defects, and autonomic dysfunction). more generally, F18A12.8A falls into a group of proteins that includes the classical neprilysins found in mammals (e.g., PEX [OMIM:307800] and the enkephalin cleaving enzymes). [Source: WormBase] BY ORTHOLOGY TO:F18A12.8a
14.6658 -15.52 0.00265185 1300 4 2 8 [+] picture button
CBG11187 ENSCBRT00000014434 B0252.1 [Source:RefSeq_peptide;Acc:NP_495419]B0252.1 [Source:RefSeq_peptide;Acc:NP_495419] BY ORTHOLOGY TO:B0252.1
14.6214 -13.49 0.00266295 1300 4 2 11 [+] picture button
CBG18119 ENSCBRT00000003278 GTPase-activating protein GAP (CeGAP). [Source:Uniprot/SWISSPROT;Acc:P34288]GTPase-activating protein GAP (CeGAP). [Source:Uniprot/SWISSPROT;Acc:P34288] BY ORTHOLOGY TO:C04D8.1
14.9631 -15.49 0.002683 1300 3 2 8 [+] picture button
CBG22236 ENSCBRT00000003689 B0041.3 [Source:RefSeq_peptide;Acc:NP_491415]B0041.3 [Source:RefSeq_peptide;Acc:NP_491415] BY ORTHOLOGY TO:B0041.3
14.8907 -23.42 0.00278536 1300 6 2 10 [+] picture button
CBG23208 ENSCBRT00000012167 Temporarily Assigned Gene name family member (tag-140) [Source:RefSeq_peptide;Acc:NP_505904]Temporarily Assigned Gene name family member (tag-140) [Source:RefSeq_peptide;Acc:NP_505904] BY ORTHOLOGY TO:T11F9.2b
14.6886 -15.21 0.00282993 1300 1 2 6 [+] picture button
CBG08699 ENSCBRT00000002903 abu-7 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139). abu-7 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-7 may help protect the organism from damage by improperly folded nascent protein. [Source: WormBase]abu-7 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139). abu-7 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-7 may help protect the organism from damage by improperly folded nascent protein. [Source: WormBase] BY ORTHOLOGY TO:C03A7.8
14.6886 -22.89 0.00291082 1300 2 2 5 [+] picture button
CBG18111 ENSCBRT00000003267 Dual oxidase maturation factor 2 (Dual oxidase activator 2). [Source:Uniprot/SWISSPROT;Acc:Q1HG44]Dual oxidase maturation factor 2 (Dual oxidase activator 2). [Source:Uniprot/SWISSPROT;Acc:Q1HG44] BY ORTHOLOGY TO:ENSPTRT00000012973
15.0501 -19.98 0.00308102 1300 3 2 11 [+] picture button
CBG03133 ENSCBRT00000006937 F13D12.8 [Source:RefSeq_peptide;Acc:NP_496506]F13D12.8 [Source:RefSeq_peptide;Acc:NP_496506] BY ORTHOLOGY TO:F13D12.8
14.6973 -15.69 0.00319455 1300 4 1 9 [+] picture button
CBG15766 ENSCBRT00000012106 unc-71 encodes an ADAM, a disintegrin and metalloprotease-containing transmembrane protein that is a member of the metzincin superfamily of proteases. UNC-71 is required non-cell autonomously for motor axon guidance and sex myoblast migration. UNC-71 does not appear to have an active metalloprotease domain, but functions with UNC-6/netrin and integrins INA-1/PAT-3 to provide guidance cues during axonal migration. UNC-71 is expressed in a restricted pattern in the excretory and excretory gland cells, some head neurons, the sphincter muscles, and hypodermal cells surrounding the vulva. [Source: WormBase]unc-71 encodes an ADAM, a disintegrin and metalloprotease-containing transmembrane protein that is a member of the metzincin superfamily of proteases. UNC-71 is required non-cell autonomously for motor axon guidance and sex myoblast migration. UNC-71 does not appear to have an active metalloprotease domain, but functions with UNC-6/netrin and integrins INA-1/PAT-3 to provide guidance cues during axonal migration. UNC-71 is expressed in a restricted pattern in the excretory and excretory gland cells, some head neurons, the sphincter muscles, and hypodermal cells surrounding the vulva. [Source: WormBase] BY ORTHOLOGY TO:Y37D8A.13
14.8622 -15.38 0.00323778 1300 5 1 9 [+] picture button
CBG08821 ENSCBRT00000000543 C37H5.3a [Source:RefSeq_peptide;Acc:NP_504297]C37H5.3a [Source:RefSeq_peptide;Acc:NP_504297] BY ORTHOLOGY TO:C37H5.3b
15.0366 -15.55 0.00332784 1300 6 1 11 [+] picture button
CBG13987 ENSCBRT00000013600 plx-1 encodes a C. elegans plexin ortholog. by homology, PLX-1 is predicted to function as a semaphorin receptor whose activity is required for proper positioning of the ray 1 cells in the male tail. genetic analyses indicate that while plx-1 functions in the same genetic pathway as the smp-1 and smp-2 semaphorin-encoding genes to position ray 1 cells, it functions in parallel to unc-73/GEF and the ced-10, mig-2, and rho-1 GTPase genes in affecting ray 1 position. plx-1 reporter gene fusions are expressed in all body wall muscles, male sex-specific muscles, and lateral hypodermal cells during postembryonic development. in the male tail, during the L3 larval stage when ray 1 cells are positioned, the plx-1 reporter is expressed predominantly in cells of the ray 1 and ray 2 lineages, with weaker and transient expression visible in the more posterior 3-9 rays. [Source: WormBase]plx-1 encodes a C. elegans plexin ortholog. by homology, PLX-1 is predicted to function as a semaphorin receptor whose activity is required for proper positioning of the ray 1 cells in the male tail. genetic analyses indicate that while plx-1 functions in the same genetic pathway as the smp-1 and smp-2 semaphorin-encoding genes to position ray 1 cells, it functions in parallel to unc-73/GEF and the ced-10, mig-2, and rho-1 GTPase genes in affecting ray 1 position. plx-1 reporter gene fusions are expressed in all body wall muscles, male sex-specific muscles, and lateral hypodermal cells during postembryonic development. in the male tail, during the L3 larval stage when ray 1 cells are positioned, the plx-1 reporter is expressed predominantly in cells of the ray 1 and ray 2 lineages, with weaker and transient expression visible in the more posterior 3-9 rays. [Source: WormBase] BY ORTHOLOGY TO:Y55F3AL.1
16.5738 -19.91 0.00339125 1300 7 1 13 [+] picture button
CBG03659 ENSCBRT00000008751 Ankyrin repeat domain-containing protein 13C. [Source:Uniprot/SWISSPROT;Acc:Q8N6S4]Ankyrin repeat domain-containing protein 13C. [Source:Uniprot/SWISSPROT;Acc:Q8N6S4] BY ORTHOLOGY TO:ENSOANT00000024469
14.7063 -15.38 0.00341122 1300 4 1 10 [+] picture button
ENSCBRT00000004725 C01G5.9 [Source:RefSeq_peptide;Acc:NP_500991]C01G5.9 [Source:RefSeq_peptide;Acc:NP_500991] BY ORTHOLOGY TO:C01G5.9
14.4953 -12.21 0.003547 1300 2 1 6 [+] picture button
CBG07027 ENSCBRT00000012402 Nipped-B-like protein (Delangin) (SCC2 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6KC79]Nipped-B-like protein (Delangin) (SCC2 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6KC79] BY ORTHOLOGY TO:ENSPTRT00000031188
14.5641 -12.82 0.00359668 1300 4 1 5 [+] picture button
CBG07646 ENSCBRT00000010632 ERGIC and golgi 2 [Source:MarkerSymbol;Acc:MGI:1914706]ERGIC and golgi 2 [Source:MarkerSymbol;Acc:MGI:1914706] BY ORTHOLOGY TO:ENSMUST00000032446
14.5426 -22.16 0.00361588 1300 2 2 5 [+] picture button
ENSCBRT00000013351 Nuclear Hormone Receptor family member (nhr-204) [Source:RefSeq_peptide;Acc:NP_503165]Nuclear Hormone Receptor family member (nhr-204) [Source:RefSeq_peptide;Acc:NP_503165] BY ORTHOLOGY TO:R02C2.4
14.5325 -13.58 0.00367006 1300 3 2 6 [+] picture button
CBG09476 ENSCBRT00000006260 F15B9.5 [Source:RefSeq_peptide;Acc:NP_506254]F15B9.5 [Source:RefSeq_peptide;Acc:NP_506254] BY ORTHOLOGY TO:F15B9.5
15.1731 -17.74 0.00373898 1300 7 2 14 [+] picture button

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