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Target Listing


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Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-77

116 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG15325 ENSCBRT00000009590 F13H8.8 [Source:RefSeq_peptide;Acc:NP_495255]F13H8.8 [Source:RefSeq_peptide;Acc:NP_495255] BY ORTHOLOGY TO:F13H8.8
16.5873 -31.6 0.000454498 1300 2 1 2 [+] picture button
CBG05965 ENSCBRT00000009039 Serpentine Receptor, class I family member (sri-19) [Source:RefSeq_peptide;Acc:NP_502043]Serpentine Receptor, class I family member (sri-19) [Source:RefSeq_peptide;Acc:NP_502043] BY ORTHOLOGY TO:Y69E1A.6
16.275 -22.28 0.00109744 1300 6 2 6 [+] picture button
ENSCBRT00000001441 Y54G11A.1 [Source:RefSeq_peptide;Acc:NP_496972]Y54G11A.1 [Source:RefSeq_peptide;Acc:NP_496972] BY ORTHOLOGY TO:Y54G11A.1
16.4218 -21.22 0.00127658 1300 5 1 7 [+] picture button
CBG08143 ENSCBRT00000003745 F13C5.3 [Source:RefSeq_peptide;Acc:NP_508125]F13C5.3 [Source:RefSeq_peptide;Acc:NP_508125] BY ORTHOLOGY TO:F13C5.3
16.0897 -19.72 0.00183367 1300 4 1 3 [+] picture button
CBG16060 ENSCBRT00000014207 putative GPCR class a orphan receptor 10 [Source:Anopheles_symbol;Acc:GPRNNA10]putative GPCR class a orphan receptor 10 [Source:Anopheles_symbol;Acc:GPRNNA10] BY ORTHOLOGY TO:AGAP000369-RA
15.7032 -19.34 0.00238532 1300 3 2 3 [+] picture button
CBG17665 ENSCBRT00000002222 C46A5.2 [Source:RefSeq_peptide;Acc:NP_501276]C46A5.2 [Source:RefSeq_peptide;Acc:NP_501276] BY ORTHOLOGY TO:C46A5.2
15.6902 -20.9 0.00246127 1300 3 2 2 [+] picture button
CBG11493 ENSCBRT00000013833 F20G2.2 [Source:RefSeq_peptide;Acc:NP_506407]F20G2.2 [Source:RefSeq_peptide;Acc:NP_506407] BY ORTHOLOGY TO:F20G2.2
15.7829 -18.47 0.00251448 1300 2 2 2 [+] picture button
CBG12247 ENSCBRT00000013311 Uncharacterized transporter C02C2.4. [Source:Uniprot/SWISSPROT;Acc:P34272]Uncharacterized transporter C02C2.4. [Source:Uniprot/SWISSPROT;Acc:P34272] BY ORTHOLOGY TO:C02C2.4
16.0262 -16.21 0.0026205 1300 8 2 10 [+] picture button
CBG04584 ENSCBRT00000010479 C53A5.5 [Source:RefSeq_peptide;Acc:NP_506601]C53A5.5 [Source:RefSeq_peptide;Acc:NP_506601] BY ORTHOLOGY TO:C53A5.5
16.5252 -17.28 0.00264924 1300 4 1 5 [+] picture button
CBG05845 ENSCBRT00000009254 Y40C5A.3 [Source:RefSeq_peptide;Acc:NP_501173]Y40C5A.3 [Source:RefSeq_peptide;Acc:NP_501173] BY ORTHOLOGY TO:Y40C5A.3
15.7877 -14.47 0.00269768 1300 7 2 8 [+] picture button
CBG18022 ENSCBRT00000003063 T23F11.4 [Source:RefSeq_peptide;Acc:NP_497952]T23F11.4 [Source:RefSeq_peptide;Acc:NP_497952] BY ORTHOLOGY TO:T23F11.4
15.5806 -14.2 0.00286214 1300 3 2 3 [+] picture button
CBG20585 ENSCBRT00000000031 grl-10 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase]grl-10 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase] BY ORTHOLOGY TO:C26F1.5
15.3212 -18.16 0.00311598 1300 3 1 2 [+] picture button
CBG16855 ENSCBRT00000012766 Sideroflexin-2. [Source:Uniprot/SWISSPROT;Acc:Q96NB2]Sideroflexin-2. [Source:Uniprot/SWISSPROT;Acc:Q96NB2] BY ORTHOLOGY TO:ENSMMUT00000027874
15.5646 -23 0.00342685 1300 4 1 4 [+] picture button
CBG05747 ENSCBRT00000009143 Thioredoxin reductase 3 (Thioredoxin reductase TR2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q86VQ6]Thioredoxin reductase 3 (Thioredoxin reductase TR2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q86VQ6] BY ORTHOLOGY TO:SINFRUT00000156741
15.4617 -21.08 0.00406771 1300 3 2 4 [+] picture button
ENSCBRT00000004215 C47D2.1 [Source:RefSeq_peptide;Acc:NP_509385]C47D2.1 [Source:RefSeq_peptide;Acc:NP_509385] BY ORTHOLOGY TO:C47D2.1
15.2156 -16.46 0.00514146 1300 3 1 7 [+] picture button
CBG03381 ENSCBRT00000007143 Y67D8A.3 [Source:RefSeq_peptide;Acc:NP_500305]Y67D8A.3 [Source:RefSeq_peptide;Acc:NP_500305] BY ORTHOLOGY TO:Y67D8A.3
15.3004 -15.34 0.00515481 1300 3 2 3 [+] picture button
CBG14837 ENSCBRT00000006952 C15H9.2 [Source:RefSeq_peptide;Acc:NP_509027]C15H9.2 [Source:RefSeq_peptide;Acc:NP_509027] BY ORTHOLOGY TO:C15H9.2
15.1137 -21.46 0.00620754 1300 3 1 3 [+] picture button
CBG09872 ENSCBRT00000008159 TFIIH basal transcription factor complex p34 subunit (Basic transcription factor 2 34 kDa subunit) (BTF2-p34) (General transcription factor IIH polypeptide 3). [Source:Uniprot/SWISSPROT;Acc:Q13889]TFIIH basal transcription factor complex p34 subunit (Basic transcription factor 2 34 kDa subunit) (BTF2-p34) (General transcription factor IIH polypeptide 3). [Source:Uniprot/SWISSPROT;Acc:Q13889] BY ORTHOLOGY TO:ENSORLT00000007404
15.7877 -18.93 0.0067807 1300 4 1 5 [+] picture button
CBG06097 ENSCBRT00000008438 Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6]Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6] BY ORTHOLOGY TO:ENST00000317868
15.0273 -12.32 0.00727437 1300 3 1 3 [+] picture button
CBG01466 ENSCBRT00000001894 grl-12 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase]grl-12 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain. the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. [Source: WormBase] BY ORTHOLOGY TO:F28A12.2
15.008 -20.06 0.0082391 1300 3 2 3 [+] picture button
CBG17727 ENSCBRT00000000171 arf-3 encodes a member of the ADP-ribosylation factor related protein family. likely expressed in touch receptors and regulated by MEC-3. [Source: WormBase]arf-3 encodes a member of the ADP-ribosylation factor related protein family. likely expressed in touch receptors and regulated by MEC-3. [Source: WormBase] BY ORTHOLOGY TO:F57H12.1
17.347 -27.47 0.00904568 1300 5 2 5 [+] picture button
CBG16529 ENSCBRT00000014597 R144.5 [Source:RefSeq_peptide;Acc:NP_498060]R144.5 [Source:RefSeq_peptide;Acc:NP_498060] BY ORTHOLOGY TO:R144.5
14.9207 -20.58 0.00912493 1300 6 1 5 [+] picture button
CBG10997 ENSCBRT00000001204 Temporarily Assigned Gene name family member (tag-239) [Source:RefSeq_peptide;Acc:NP_509214]Temporarily Assigned Gene name family member (tag-239) [Source:RefSeq_peptide;Acc:NP_509214] BY ORTHOLOGY TO:ZK867.1c
15.7984 -18.48 0.00931201 1300 2 1 3 [+] picture button
CBG19069 ENSCBRT00000013967 Y57E12AL.2 [Source:RefSeq_peptide;Acc:NP_504790]Y57E12AL.2 [Source:RefSeq_peptide;Acc:NP_504790] BY ORTHOLOGY TO:Y57E12AL.2
17.3062 -21.14 0.00941903 1300 3 2 3 [+] picture button
CBG16142 ENSCBRT00000012580 C23F12.1b [Source:RefSeq_peptide;Acc:NP_509581]C23F12.1b [Source:RefSeq_peptide;Acc:NP_509581] BY ORTHOLOGY TO:C23F12.1a
14.9573 -14.56 0.0094728 1300 2 2 2 [+] picture button
CBG23387 ENSCBRT00000011505 C13C4.6 [Source:RefSeq_peptide;Acc:NP_506042]C13C4.6 [Source:RefSeq_peptide;Acc:NP_506042] BY ORTHOLOGY TO:C13C4.6
14.9492 -17.86 0.00960921 1300 4 1 4 [+] picture button
CBG08301 ENSCBRT00000012982 ZC416.6 [Source:RefSeq_peptide;Acc:NP_500385]ZC416.6 [Source:RefSeq_peptide;Acc:NP_500385] BY ORTHOLOGY TO:ZC416.6
17.233 -20.81 0.0101294 1300 4 1 7 [+] picture button
CBG01543 ENSCBRT00000005670 zinc finger, FYVE domain containing 20 [Source:MarkerSymbol;Acc:MGI:1925537]zinc finger, FYVE domain containing 20 [Source:MarkerSymbol;Acc:MGI:1925537] BY ORTHOLOGY TO:ENSMUST00000014694
17.2185 -27.18 0.0102756 1300 4 1 5 [+] picture button
CBG01707 ENSCBRT00000005584 ZK185.1 [Source:RefSeq_peptide;Acc:NP_500587]ZK185.1 [Source:RefSeq_peptide;Acc:NP_500587] BY ORTHOLOGY TO:ZK185.1
17.1692 -16.94 0.0107912 1300 4 1 4 [+] picture button
CBG16716 ENSCBRT00000012798 F46C8.3 [Source:RefSeq_peptide;Acc:NP_509272]F46C8.3 [Source:RefSeq_peptide;Acc:NP_509272] BY ORTHOLOGY TO:F46C8.3
14.9646 -11.53 0.0116974 1300 5 2 8 [+] picture button
CBG22102 ENSCBRT00000004315 Temporarily Assigned Gene name family member (tag-146) [Source:RefSeq_peptide;Acc:NP_491744]Temporarily Assigned Gene name family member (tag-146) [Source:RefSeq_peptide;Acc:NP_491744] BY ORTHOLOGY TO:C27A12.3
17.0555 -14.7 0.0120781 1300 6 1 14 [+] picture button
CBG20976 ENSCBRT00000000577 F15A4.5 [Source:RefSeq_peptide;Acc:NP_496657]F15A4.5 [Source:RefSeq_peptide;Acc:NP_496657] BY ORTHOLOGY TO:F15A4.5
17.0546 -30.73 0.0120887 1300 1 1 1 [+] picture button
CBG09689 ENSCBRT00000005763 ZC302.3 [Source:RefSeq_peptide;Acc:NP_505738]ZC302.3 [Source:RefSeq_peptide;Acc:NP_505738] BY ORTHOLOGY TO:ZC302.3
16.9571 -21.66 0.0133127 1300 6 1 6 [+] picture button
CBG05924 ENSCBRT00000009004 F45E4.5 [Source:RefSeq_peptide;Acc:NP_501239]F45E4.5 [Source:RefSeq_peptide;Acc:NP_501239] BY ORTHOLOGY TO:F45E4.5
16.9404 -22.91 0.0135354 1300 4 1 3 [+] picture button
CBG00929 ENSCBRT00000003964 Serpentine receptor class delta-2 (Protein srd-2). [Source:Uniprot/SWISSPROT;Acc:Q21767]Serpentine receptor class delta-2 (Protein srd-2). [Source:Uniprot/SWISSPROT;Acc:Q21767] BY ORTHOLOGY TO:R05H5.1
16.9197 -18.11 0.0138145 1300 5 1 6 [+] picture button
CBG15155 ENSCBRT00000010349 par-2 encodes a protein containing a C3HC4-type RING-finger, a specialized type of zinc-finger found in E3 ubiquitin ligase subunits. PAR-2 is required maternally for polarization of the C. elegans zygote along the anterior-posterior (A-P) axis and is asymmetrically localized to the posterior cortex of the one- and two-cell embryo via interdependent interactions with PAR-3, PAR-6, and PKC-3. [Source: WormBase]par-2 encodes a protein containing a C3HC4-type RING-finger, a specialized type of zinc-finger found in E3 ubiquitin ligase subunits. PAR-2 is required maternally for polarization of the C. elegans zygote along the anterior-posterior (A-P) axis and is asymmetrically localized to the posterior cortex of the one- and two-cell embryo via interdependent interactions with PAR-3, PAR-6, and PKC-3. [Source: WormBase] BY ORTHOLOGY TO:F58B6.3b
16.9149 -17.98 0.0138803 1300 5 1 7 [+] picture button
CBG00321 ENSCBRT00000000293 The ego-1 gene encodes a homolog of RNA-directed RNA polymerase that is essential for germ-line development. [Source: WormBase]The ego-1 gene encodes a homolog of RNA-directed RNA polymerase that is essential for germ-line development. [Source: WormBase] BY ORTHOLOGY TO:F26A3.3
16.9042 -25.04 0.0140282 1300 1 1 1 [+] picture button
CBG15170 ENSCBRT00000010361 The bra-2 gene encodes a homolog of the human BMP receptor-associated molecule (BRAM1), paralogous to bra-1, that may act upon the SMA-6 TGF-beta signalling pathway [Source: WormBase]The bra-2 gene encodes a homolog of the human BMP receptor-associated molecule (BRAM1), paralogous to bra-1, that may act upon the SMA-6 TGF-beta signalling pathway [Source: WormBase] BY ORTHOLOGY TO:F23H11.1
16.7498 -24.56 0.0163372 1300 3 1 3 [+] picture button
CBG20006 ENSCBRT00000002508 dsl-1 encodes a secreted protein with a single DSL and EGF domain in series, resembling Delta/LAG-2. DSL-1, with APX-1 and LAG-2, is collectively required for LIN-12/Notch-mediated lateral signalling during postembryonic vulval development. DSL-1, when misexpressed by lag-2 sequences, can rescue the larval-lethal and anchor cell phenotypes of lag-2(q420ts). dsl-1(RNAi) animals have abnormal vulvae in a genetic background sensitized for lateral signalling defects. dsl-1(ok810) mutants, while viable and fertile, have a 4% penetrant defect in lateral signaling, which exceeds 13% with apx-1 and lag-2 RNAi. dsl-1 is strongly transcribed in P6.p cells. SUR-2 regulates dsl-1 along with apx-1 and lag-2. DSL-1 belongs to a nematode-specific family of Delta/LAG-2-like proteins that includes DSL-2, -3, -5, -6, and -7. [Source: WormBase]dsl-1 encodes a secreted protein with a single DSL and EGF domain in series, resembling Delta/LAG-2. DSL-1, with APX-1 and LAG-2, is collectively required for LIN-12/Notch-mediated lateral signalling during postembryonic vulval development. DSL-1, when misexpressed by lag-2 sequences, can rescue the larval-lethal and anchor cell phenotypes of lag-2(q420ts). dsl-1(RNAi) animals have abnormal vulvae in a genetic background sensitized for lateral signalling defects. dsl-1(ok810) mutants, while viable and fertile, have a 4% penetrant defect in lateral signaling, which exceeds 13% with apx-1 and lag-2 RNAi. dsl-1 is strongly transcribed in P6.p cells. SUR-2 regulates dsl-1 along with apx-1 and lag-2. DSL-1 belongs to a nematode-specific family of Delta/LAG-2-like proteins that includes DSL-2, -3, -5, -6, and -7. [Source: WormBase] BY ORTHOLOGY TO:W09G12.4
16.6849 -20.55 0.0174164 1300 3 1 3 [+] picture button
CBG11989 ENSCBRT00000011739 cah-6 encodes a predicted carbonic anhydrase. [Source: WormBase]cah-6 encodes a predicted carbonic anhydrase. [Source: WormBase] BY ORTHOLOGY TO:T28F2.3
16.6427 -22.12 0.0181563 1300 1 1 1 [+] picture button
CBG13359 ENSCBRT00000009474 F10F2.8 [Source:RefSeq_peptide;Acc:NP_497946]F10F2.8 [Source:RefSeq_peptide;Acc:NP_497946] BY ORTHOLOGY TO:F10F2.8
16.6221 -19.35 0.0185278 1300 3 1 3 [+] picture button
CBG14650 ENSCBRT00000006902 Y34B4A.8 [Source:RefSeq_peptide;Acc:NP_508894]Y34B4A.8 [Source:RefSeq_peptide;Acc:NP_508894] BY ORTHOLOGY TO:Y34B4A.8
16.5848 -23.82 0.0192189 1300 6 1 6 [+] picture button
CBG11286 ENSCBRT00000014501 TropoMoDulin family member (tmd-2) [Source:RefSeq_peptide;Acc:NP_872143]TropoMoDulin family member (tmd-2) [Source:RefSeq_peptide;Acc:NP_872143] BY ORTHOLOGY TO:C08D8.2b
16.5757 -15.73 0.0193913 1300 6 1 11 [+] picture button
CBG06947 ENSCBRT00000007397 Protein CLASP-3. [Source:Uniprot/SWISSPROT;Acc:Q03609]Protein CLASP-3. [Source:Uniprot/SWISSPROT;Acc:Q03609] BY ORTHOLOGY TO:ZC84.3
16.5539 -24.46 0.0198114 1300 5 1 4 [+] picture button
CBG09495 ENSCBRT00000005986 Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF-3 p28) (eIF3k) (Muscle-specific gene M9 protein) (PLAC-24). [Source:Uniprot/SWISSPROT;Acc:Q9UBQ5]Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF-3 p28) (eIF3k) (Muscle-specific gene M9 protein) (PLAC-24). [Source:Uniprot/SWISSPROT;Acc:Q9UBQ5] BY ORTHOLOGY TO:ENSGACT00000017440
16.4798 -18.18 0.0213071 1300 2 1 4 [+] picture button
CBG01657 ENSCBRT00000005540 F17E9.5 [Source:RefSeq_peptide;Acc:NP_501412]F17E9.5 [Source:RefSeq_peptide;Acc:NP_501412] BY ORTHOLOGY TO:F17E9.5
16.4731 -18.39 0.0214481 1300 1 1 1 [+] picture button
CBG20037 ENSCBRT00000000675 Neuropeptide Receptor family member (npr-2) [Source:RefSeq_peptide;Acc:NP_501701]Neuropeptide Receptor family member (npr-2) [Source:RefSeq_peptide;Acc:NP_501701] BY ORTHOLOGY TO:T05A1.1a
16.4561 -13.47 0.0218083 1300 4 1 5 [+] picture button
ENSCBRT00000008416 Putative folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma- glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase). [Source:Uniprot/SWISSPROT;Acc:Q09509]Putative folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma- glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase). [Source:Uniprot/SWISSPROT;Acc:Q09509] BY ORTHOLOGY TO:F25B5.6b
16.4352 -23.29 0.0222584 1300 4 2 4 [+] picture button
CBG19300 ENSCBRT00000013498 mTERF domain-containing protein 1, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96E29]mTERF domain-containing protein 1, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96E29] BY ORTHOLOGY TO:ENSMODT00000008805
16.4224 -21.87 0.0225394 1300 5 1 5 [+] picture button
CBG12389 ENSCBRT00000013135 unc-29 encodes an non-alpha subunit of the nicotinic acetylcholine receptor (nAChR) superfamily. UNC-29 is required for normal locomotion and egg-laying, and functions as a subunit of a ligand-gated ion channel that likely mediates fast actions of acetylcholine at neuromuscular junctions and in the nervous system. when coexpressed with LEV-1, a non-alpha nAChR subunit, and UNC-38 or UNC-63, alpha AChR subunits, the resulting multimer can form levamisole-gated channels. UNC-29 is expressed in body wall muscle. [Source: WormBase]unc-29 encodes an non-alpha subunit of the nicotinic acetylcholine receptor (nAChR) superfamily. UNC-29 is required for normal locomotion and egg-laying, and functions as a subunit of a ligand-gated ion channel that likely mediates fast actions of acetylcholine at neuromuscular junctions and in the nervous system. when coexpressed with LEV-1, a non-alpha nAChR subunit, and UNC-38 or UNC-63, alpha AChR subunits, the resulting multimer can form levamisole-gated channels. UNC-29 is expressed in body wall muscle. [Source: WormBase] BY ORTHOLOGY TO:T08G11.5
16.3336 -18.63 0.0245871 1300 2 2 2 [+] picture button

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