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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-124

251 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG06810 ENSCBRT00000007439 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (MCCase subunit beta) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta) (3- methylcrotonyl-CoA carboxylase non-biotin-containing [Source:Uniprot/SWISSPROT;Acc:Q9HCC0]Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (MCCase subunit beta) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta) (3- methylcrotonyl-CoA carboxylase non-biotin-containing [Source:Uniprot/SWISSPROT;Acc:Q9HCC0] BY ORTHOLOGY TO:ENSMMUT00000021284
15.8947 -22.32 0.0000000324234 1300 4 1 4 [+] picture button
CBG12227 ENSCBRT00000013238 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282] BY ORTHOLOGY TO:ENST00000219368
15.4975 -19.46 0.000000410379 1300 4 2 8 [+] picture button
CBG24024 ENSCBRT00000009776 Serpentine Receptor, class H family member (srh-278) [Source:RefSeq_peptide;Acc:NP_506743]Serpentine Receptor, class H family member (srh-278) [Source:RefSeq_peptide;Acc:NP_506743] BY ORTHOLOGY TO:T09F5.8
16.5879 -22.55 0.000001 1300 4 1 3 [+] picture button
CBG22475 ENSCBRT00000005123 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL000336-RA
15.3204 -15.8 0.00000797556 1300 5 1 6 [+] picture button
CBG18044 ENSCBRT00000003127 M88.4 [Source:RefSeq_peptide;Acc:NP_497922]M88.4 [Source:RefSeq_peptide;Acc:NP_497922] BY ORTHOLOGY TO:M88.4
17.9463 -19.04 0.0000291065 1300 4 1 7 [+] picture button
CBG12340 ENSCBRT00000013095 hypothetical protein LOC436758 [Source:RefSeq_peptide;Acc:NP_001002485]hypothetical protein LOC436758 [Source:RefSeq_peptide;Acc:NP_001002485] BY ORTHOLOGY TO:ENSDART00000048727
14.7015 -25.04 0.0000316416 1300 2 1 2 [+] picture button
CBG04423 ENSCBRT00000008914 Laminin subunit alpha-3 precursor (Epiligrin 170 kDa subunit) (E170) (Nicein subunit alpha). [Source:Uniprot/SWISSPROT;Acc:Q16787]Laminin subunit alpha-3 precursor (Epiligrin 170 kDa subunit) (E170) (Nicein subunit alpha). [Source:Uniprot/SWISSPROT;Acc:Q16787] BY ORTHOLOGY TO:SINFRUT00000165188
16.3423 -21.5 0.0000571697 1300 2 1 2 [+] picture button
CBG15889 ENSCBRT00000011026 F22F7.6 [Source:RefSeq_peptide;Acc:NP_503575]F22F7.6 [Source:RefSeq_peptide;Acc:NP_503575] BY ORTHOLOGY TO:F22F7.6
15.6161 -16.98 0.0000681719 1300 5 1 6 [+] picture button
CBG00747 ENSCBRT00000000742 hypothetical protein LOC553594 [Source:RefSeq_peptide;Acc:NP_001018407]hypothetical protein LOC553594 [Source:RefSeq_peptide;Acc:NP_001018407] BY ORTHOLOGY TO:ENSDART00000002459
14.9967 -17.1 0.0000769857 1300 1 2 1 [+] picture button
CBG06028 ENSCBRT00000008580 peroxisomal biogenesis factor 14 [Source:MarkerSymbol;Acc:MGI:1927868]peroxisomal biogenesis factor 14 [Source:MarkerSymbol;Acc:MGI:1927868] BY ORTHOLOGY TO:ENSMUST00000103217
15.6638 -15.49 0.000078259 1300 3 1 1 [+] picture button
CBG01006 ENSCBRT00000002134 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase). [Source:Uniprot/SWISSPROT;Acc:P23919]Thymidylate kinase (EC 2.7.4.9) (dTMP kinase). [Source:Uniprot/SWISSPROT;Acc:P23919] BY ORTHOLOGY TO:ENSOANT00000013960
14.4964 -17.97 0.0000824056 1300 4 1 4 [+] picture button
CBG23741 ENSCBRT00000004467 CG18271-PA [Source:RefSeq_peptide;Acc:NP_649484]CG18271-PA [Source:RefSeq_peptide;Acc:NP_649484] BY ORTHOLOGY TO:CG18271-RA
15.4132 -17.33 0.0000854334 1300 7 1 9 [+] picture button
CBG07125 ENSCBRT00000012102 Acyl-coenzyme A dehydrogenase family, member 8 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G3W2]Acyl-coenzyme A dehydrogenase family, member 8 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G3W2] BY ORTHOLOGY TO:ENSMMUT00000009918
14.4819 -16.03 0.0000871029 1300 3 1 3 [+] picture button
CBG02611 ENSCBRT00000007531 WD repeat protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9UNX4]WD repeat protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9UNX4] BY ORTHOLOGY TO:ENSMMUT00000011907
15.7504 -19.22 0.000087287 1300 2 1 2 [+] picture button
CBG03161 ENSCBRT00000006906 Peptidyl-prolyl cis-trans isomerase H (EC 5.2.1.8) (PPIase H) (Rotamase H) (U-snRNP-associated cyclophilin SnuCyp-20) (USA-CYP) (Small nuclear ribonucleoprotein particle-specific cyclophilin H) (CypH). [Source:Uniprot/SWISSPROT;Acc:O43447]Peptidyl-prolyl cis-trans isomerase H (EC 5.2.1.8) (PPIase H) (Rotamase H) (U-snRNP-associated cyclophilin SnuCyp-20) (USA-CYP) (Small nuclear ribonucleoprotein particle-specific cyclophilin H) (CypH). [Source:Uniprot/SWISSPROT;Acc:O43447] BY ORTHOLOGY TO:ENSORLT00000005250
15.1743 -22.25 0.000106988 1300 4 1 5 [+] picture button
ENSCBRT00000006385 C18C4.5a [Source:RefSeq_peptide;Acc:NP_741538]C18C4.5a [Source:RefSeq_peptide;Acc:NP_741538] BY ORTHOLOGY TO:C18C4.5b
16.7521 -24.75 0.000108191 1300 4 2 5 [+] picture button
CBG11203 ENSCBRT00000014415 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP- GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7). [Source:Uniprot/SWISSPROT;Acc:Q9NTN3]UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP- GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7). [Source:Uniprot/SWISSPROT;Acc:Q9NTN3] BY ORTHOLOGY TO:ENSGALT00000018125
14.535 -16.36 0.000196798 1300 6 2 7 [+] picture button
CBG23420 ENSCBRT00000011538 DNA repair protein rad-50 (EC 3.6.-.-). [Source:Uniprot/SWISSPROT;Acc:O44199]DNA repair protein rad-50 (EC 3.6.-.-). [Source:Uniprot/SWISSPROT;Acc:O44199] BY ORTHOLOGY TO:T04H1.4
15.6733 -16.19 0.000224389 1300 2 1 3 [+] picture button
CBG07052 ENSCBRT00000012419 Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA). [Source:Uniprot/SWISSPROT;Acc:Q86WA6]Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA). [Source:Uniprot/SWISSPROT;Acc:Q86WA6] BY ORTHOLOGY TO:ENSORLT00000015962
15.1489 -17.04 0.000258216 1300 6 1 5 [+] picture button
CBG23016 ENSCBRT00000008861 U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10). [Source:Uniprot/SWISSPROT;Acc:O00566]U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10). [Source:Uniprot/SWISSPROT;Acc:O00566] BY ORTHOLOGY TO:SINFRUT00000151377
15.1088 -18.35 0.00028107 1300 6 1 7 [+] picture button
CBG04200 ENSCBRT00000007606 GPI ethanolamine phosphate transferase 1 (EC 2.-.-.-) (Phosphatidylinositol-glycan biosynthesis class N protein) (PIG-N) (MCD4 homolog). [Source:Uniprot/SWISSPROT;Acc:O95427]GPI ethanolamine phosphate transferase 1 (EC 2.-.-.-) (Phosphatidylinositol-glycan biosynthesis class N protein) (PIG-N) (MCD4 homolog). [Source:Uniprot/SWISSPROT;Acc:O95427] BY ORTHOLOGY TO:ENSGACT00000003180
16.3945 -14.59 0.000310304 1300 5 1 6 [+] picture button
CBG23704 ENSCBRT00000004149 queuine tRNA-ribosyltransferase domain containing 1 [Source:RefSeq_peptide;Acc:NP_078914]queuine tRNA-ribosyltransferase domain containing 1 [Source:RefSeq_peptide;Acc:NP_078914] BY ORTHOLOGY TO:ENSORLT00000011549
14.9439 -20.58 0.000311693 1300 3 1 3 [+] picture button
CBG00117 ENSCBRT00000001545 TBC1 domain family member 13. [Source:Uniprot/SWISSPROT;Acc:Q9NVG8]TBC1 domain family member 13. [Source:Uniprot/SWISSPROT;Acc:Q9NVG8] BY ORTHOLOGY TO:ENSORLT00000024933
16.1928 -20.6 0.000314779 1300 5 1 6 [+] picture button
CBG23755 ENSCBRT00000004503 Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2) [Contains: Prostaglandin E synthase 2 truncated form]. [Source:Uniprot/SWISSPROT;Acc:Q9H7Z7]Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2) [Contains: Prostaglandin E synthase 2 truncated form]. [Source:Uniprot/SWISSPROT;Acc:Q9H7Z7] BY ORTHOLOGY TO:ENST00000338961
14.7916 -13.45 0.000354024 1300 1 1 1 [+] picture button
CBG17302 ENSCBRT00000001220 mig-2 encodes a member of the Rho family of GTP-binding proteins that affects the migration of Q neuroblasts, HSN cells, and CAN cells as well as axon outgrowth and guidance. it is expressed in early embryos and expressed in adults in the vulva, distal tip cells of the gonad, and the sex myoblasts and their descendants. [Source: WormBase]mig-2 encodes a member of the Rho family of GTP-binding proteins that affects the migration of Q neuroblasts, HSN cells, and CAN cells as well as axon outgrowth and guidance. it is expressed in early embryos and expressed in adults in the vulva, distal tip cells of the gonad, and the sex myoblasts and their descendants. [Source: WormBase] BY ORTHOLOGY TO:C35C5.4
15.0982 -15.8 0.000375669 1300 4 6 4 [+] picture button
CBG00615 ENSCBRT00000003272 Trimethyllysine dioxygenase, mitochondrial precursor (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha- ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD). [Source:Uniprot/SWISSPROT;Acc:Q91ZW6]Trimethyllysine dioxygenase, mitochondrial precursor (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha- ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD). [Source:Uniprot/SWISSPROT;Acc:Q91ZW6] BY ORTHOLOGY TO:ENSRNOT00000049573
15.0867 -22.5 0.000474398 1300 2 1 2 [+] picture button
CBG13282 ENSCBRT00000001052 CiGl protein [Source:RefSeq_peptide;Acc:NP_001027655]CiGl protein [Source:RefSeq_peptide;Acc:NP_001027655] BY ORTHOLOGY TO:ENSCINT00000000448
15.468 -20.85 0.00049812 1300 4 2 4 [+] picture button
CBG17194 ENSCBRT00000000493 zinc transporterzinc transporter BY ORTHOLOGY TO:AAEL014762-RA
15.535 -15.9 0.000519015 1300 7 2 6 [+] picture button
CBG15340 ENSCBRT00000009561 Vacuolar protein sorting-associated protein 33A (hVPS33A). [Source:Uniprot/SWISSPROT;Acc:Q96AX1]Vacuolar protein sorting-associated protein 33A (hVPS33A). [Source:Uniprot/SWISSPROT;Acc:Q96AX1] BY ORTHOLOGY TO:ENSGALT00000007064
14.8154 -15.63 0.000579627 1300 1 1 1 [+] picture button
CBG21661 ENSCBRT00000004599 hypothetical protein LOC553701 [Source:RefSeq_peptide;Acc:NP_001018510]hypothetical protein LOC553701 [Source:RefSeq_peptide;Acc:NP_001018510] BY ORTHOLOGY TO:ENSDART00000014013
15.4029 -17.25 0.00060707 1300 1 1 1 [+] picture button
CBG00512 ENSCBRT00000003054 Translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon). [Source:Uniprot/SWISSPROT;Acc:Q13144]Translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon). [Source:Uniprot/SWISSPROT;Acc:Q13144] BY ORTHOLOGY TO:ENSMMUT00000009193
14.5651 -17.43 0.000621691 1300 4 1 5 [+] picture button
CBG21068 ENSCBRT00000000188 ELKS [Source:RefSeq_peptide;Acc:NP_001015065]ELKS [Source:RefSeq_peptide;Acc:NP_001015065] BY ORTHOLOGY TO:ENSDART00000104236
14.6828 -16.65 0.000635144 1300 1 1 1 [+] picture button
CBG06891 ENSCBRT00000007354 Integrin alpha pat-2 precursor. [Source:Uniprot/SWISSPROT;Acc:P34446]Integrin alpha pat-2 precursor. [Source:Uniprot/SWISSPROT;Acc:P34446] BY ORTHOLOGY TO:F54F2.1
15.8539 -22.55 0.000693892 1300 7 2 9 [+] picture button
CBG21644 ENSCBRT00000004595 Regulatory-associated protein of mTOR (Raptor) (P150 target of rapamycin (TOR)-scaffold protein). [Source:Uniprot/SWISSPROT;Acc:Q8N122]Regulatory-associated protein of mTOR (Raptor) (P150 target of rapamycin (TOR)-scaffold protein). [Source:Uniprot/SWISSPROT;Acc:Q8N122] BY ORTHOLOGY TO:ENSMMUT00000017943
15.0969 -22.02 0.000728171 1300 2 1 2 [+] picture button
CBG02583 ENSCBRT00000007550 heparan sulphate sulfotransferaseheparan sulphate sulfotransferase BY ORTHOLOGY TO:AAEL001458-RA
15.1997 -19.25 0.000739297 1300 3 1 4 [+] picture button
CBG20194 ENSCBRT00000000806 T02C12.3 [Source:RefSeq_peptide;Acc:NP_497808]T02C12.3 [Source:RefSeq_peptide;Acc:NP_497808] BY ORTHOLOGY TO:T02C12.3
15.636 -14.34 0.000831773 1300 4 1 4 [+] picture button
CBG13002 ENSCBRT00000012953 Meckelin (Meckel syndrome type 3 protein homolog) (Transmembrane protein 67). [Source:Uniprot/SWISSPROT;Acc:P0C152]Meckelin (Meckel syndrome type 3 protein homolog) (Transmembrane protein 67). [Source:Uniprot/SWISSPROT;Acc:P0C152] BY ORTHOLOGY TO:ENSRNOT00000021839
15.6532 -21.2 0.000871701 1300 2 1 2 [+] picture button
CBG05538 ENSCBRT00000005339 Y44A6D.3 [Source:RefSeq_peptide;Acc:NP_508012]Y44A6D.3 [Source:RefSeq_peptide;Acc:NP_508012] BY ORTHOLOGY TO:Y44A6D.3
14.9462 -15.42 0.000991089 1300 2 2 1 [+] picture button
CBG12920 ENSCBRT00000013742 Y51A2D.5 [Source:RefSeq_peptide;Acc:NP_507624]Y51A2D.5 [Source:RefSeq_peptide;Acc:NP_507624] BY ORTHOLOGY TO:Y51A2D.5
15.637 -18.46 0.00117911 1300 2 2 2 [+] picture button
CBG05390 ENSCBRT00000004629 C01B10.9 [Source:RefSeq_peptide;Acc:NP_501023]C01B10.9 [Source:RefSeq_peptide;Acc:NP_501023] BY ORTHOLOGY TO:C01B10.9
16.1533 -22.72 0.00118304 1300 3 2 4 [+] picture button
CBG20503 ENSCBRT00000003907 F25F8.1 [Source:RefSeq_peptide;Acc:NP_491469]F25F8.1 [Source:RefSeq_peptide;Acc:NP_491469] BY ORTHOLOGY TO:F25F8.1
15.5777 -17.72 0.00119163 1300 4 1 4 [+] picture button
CBG02375 ENSCBRT00000006648 Mesoderm development candidate 2 (Renal carcinoma antigen NY-REN-61). [Source:Uniprot/SWISSPROT;Acc:Q14696]Mesoderm development candidate 2 (Renal carcinoma antigen NY-REN-61). [Source:Uniprot/SWISSPROT;Acc:Q14696] BY ORTHOLOGY TO:ENST00000261758
15.5659 -20.57 0.00122265 1300 8 1 7 [+] picture button
CBG05851 ENSCBRT00000009247 T12B3.1 [Source:RefSeq_peptide;Acc:NP_501178]T12B3.1 [Source:RefSeq_peptide;Acc:NP_501178] BY ORTHOLOGY TO:T12B3.1
14.6848 -19.98 0.0013742 1300 4 1 4 [+] picture button
CBG02740 ENSCBRT00000007361 T09F3.1 [Source:RefSeq_peptide;Acc:NP_496235]T09F3.1 [Source:RefSeq_peptide;Acc:NP_496235] BY ORTHOLOGY TO:T09F3.1
15.5799 -20 0.00148247 1300 4 2 4 [+] picture button
CBG06428 ENSCBRT00000010936 K09H11.3 [Source:RefSeq_peptide;Acc:NP_504503]K09H11.3 [Source:RefSeq_peptide;Acc:NP_504503] BY ORTHOLOGY TO:K09H11.3
15.8405 -18.99 0.00178273 1300 2 1 2 [+] picture button
CBG03834 ENSCBRT00000008681 Steroidogenic acute regulatory protein, mitochondrial precursor (StAR) (StARD1). [Source:Uniprot/SWISSPROT;Acc:Q9DG09]Steroidogenic acute regulatory protein, mitochondrial precursor (StAR) (StARD1). [Source:Uniprot/SWISSPROT;Acc:Q9DG09] BY ORTHOLOGY TO:ENSGALT00000005128
15.2814 -19.05 0.00182524 1300 4 1 4 [+] picture button
CBG16594 ENSCBRT00000014556 nhr-10 encodes a predicted nuclear hormone receptor diverged from nuclear hormone receptors in other phyla. its mRNA is expressed throughout development with possibly lower expression from the L4 larval to adult stages, and the protein is expressed in neuronal processes. [Source: WormBase]nhr-10 encodes a predicted nuclear hormone receptor diverged from nuclear hormone receptors in other phyla. its mRNA is expressed throughout development with possibly lower expression from the L4 larval to adult stages, and the protein is expressed in neuronal processes. [Source: WormBase] BY ORTHOLOGY TO:B0280.8
15.2814 -18.68 0.00190641 1300 4 1 4 [+] picture button
CBG18323 ENSCBRT00000001626 T-cell activation protein phosphatase 2C [Source:RefSeq_peptide;Acc:NP_644812]T-cell activation protein phosphatase 2C [Source:RefSeq_peptide;Acc:NP_644812] BY ORTHOLOGY TO:ENSGALT00000007244
15.4338 -13.47 0.00192654 1300 2 1 2 [+] picture button
CBG02410 ENSCBRT00000006580 Calmodulin-like protein 5 (Calmodulin-like skin protein). [Source:Uniprot/SWISSPROT;Acc:Q9NZT1]Calmodulin-like protein 5 (Calmodulin-like skin protein). [Source:Uniprot/SWISSPROT;Acc:Q9NZT1] BY ORTHOLOGY TO:ENSMMUT00000024537
15.2722 -24.32 0.00203477 1300 3 1 3 [+] picture button
CBG06224 ENSCBRT00000008250 RNA-binding protein 34 (RNA-binding motif protein 34). [Source:Uniprot/SWISSPROT;Acc:P42696]RNA-binding protein 34 (RNA-binding motif protein 34). [Source:Uniprot/SWISSPROT;Acc:P42696] BY ORTHOLOGY TO:SINFRUT00000146475
15.1858 -14.51 0.00220343 1300 3 1 3 [+] picture button

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