ID U44843; SV 1; linear; genomic DNA; STD; PRO; 3602 BP. XX AC U44843; XX DT 26-FEB-1996 (Rel. 46, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE Lactococcus lactis plasmid pND324, complete sequence. XX KW . XX OS Lactococcus lactis OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; OC Lactococcus. OG Plasmid pND324 XX RN [1] RP 1-3602 RA Duan K., Harvey L.M., Liu C.Q., Dunn W.N.; RT ; RL Submitted (08-JAN-1996) to the INSDC. RL Kangmin Duan, Biotechnology, University of New South Wales, Sydney, NSW RL 2052, Australia XX RN [2] RC Sequence update by submitter RP 1-3602 RA Duan K., Harvey L.M., Liu C.Q., Dunn W.N.; RT ; RL Submitted (18-APR-1997) to the INSDC. RL Kangmin Duan, Biotechnology, University of New South Wales, Sydney, NSW RL 2052, Australia XX DR MD5; b18a18809296a31419cc534464322f76. DR EuropePMC; PMC111265; 10735859. DR RFAM; RF00238; ctRNA_pND324. DR RFAM; RF01742; lactis-plasmid. XX CC On Apr 18, 1997 this sequence version replaced gi:1174230. XX FH Key Location/Qualifiers FH FT source 1..3602 FT /organism="Lactococcus lactis" FT /plasmid="pND324" FT /sub_species="lactis M127" FT /mol_type="genomic DNA" FT /db_xref="taxon:1358" FT repeat_region 523..604 FT /rpt_type=TANDEM FT regulatory 609..614 FT /regulatory_class="minus_35_signal" FT regulatory 631..636 FT /regulatory_class="minus_10_signal" FT repeat_region 643..678 FT /rpt_type=INVERTED FT /rpt_unit_range=643..651 FT /rpt_unit_range=670..678 FT regulatory 699..706 FT /regulatory_class="ribosome_binding_site" FT gene 716..1867 FT /gene="repB" FT CDS 716..1867 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="replication protein" FT /db_xref="GOA:Q48621" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR010931" FT /db_xref="InterPro:IPR036388" FT /db_xref="InterPro:IPR036390" FT /db_xref="UniProtKB/TrEMBL:Q48621" FT /protein_id="AAB52513.1" FT /translation="MPIISEKQNNQKQVLTLNELEKRKVVEHNSLITSIAKMDKTPLKM FT FELAVSCIDTEKPLEDNTVYLSKKDLFAFFKVSDNDKHSRFKEAVEKMQKQAFFKIKEK FT KDKGFEFENIVPIPYVKWTDYNDEVLIRFSPEIIPYLVNLKKNFTQHALSDLAELNSKY FT SIILYRWLSMNYNQYEHYSVKGGRRAEQVESYRNPSISIKELREMTDTINEYKLMHQFT FT ERILKEPLEEINAHTSFNVSYEKVKKGRSIDSIVFHIEKKRMADDNSYKLDDRAYQEDK FT ARKAETEDELVLQAINSPYTKLLMEHFLLSYLDLMDIKILAGLQKNVYPLYDELKDLRG FT LNGVKDHLSYVGAKQEDYSKKNICKYLKKAIEQYLPTVKRQDL" FT regulatory 1857..1860 FT /regulatory_class="ribosome_binding_site" FT CDS 1867..2493 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orfX; protein with DNA binding potential" FT /db_xref="UniProtKB/TrEMBL:Q48622" FT /protein_id="AAB52514.1" FT /translation="MSEKLKTIKELADELGVSKSYVDKIIRILKLHTKLDKVGNKYVIS FT KKQEKSIITRIENSKSTTETHTESTTQSHTKVDAEVDFLKEEIAYLKSNHDKQLTNKDK FT QIETLSNLLDQQQRLALQDKKLLEEYKAEINDLKALKMPSEDTKEEQSNYRSLEKEKDF FT VQTIQESYESEIKVLNQKLAEQEEQIQEIQKEKETKEKKWFQFWK" FT gene 2492..2732 FT /gene="repC" FT regulatory 2492..2496 FT /gene="repC" FT /regulatory_class="ribosome_binding_site" FT CDS 2502..2732 FT /codon_start=1 FT /transl_table=11 FT /gene="repC" FT /product="RepC" FT /db_xref="UniProtKB/TrEMBL:O05547" FT /protein_id="AAB52515.1" FT /translation="MAQTFDRKILRALQDNGVREIRAYEVVSKRLTIFQTDRGTFKYSD FT SLYRLVAPRQELWRNCTTGFISEEKYHFYKK" FT regulatory 2759..2785 FT /note="rho-independent transcription terminator" FT /regulatory_class="terminator" XX SQ Sequence 3602 BP; 1407 A; 543 C; 659 G; 993 T; 0 other; tcgaacggaa cggaacagtt cataacttaa cagttgtgag ctgtttttag catgcagatg 60 aatagtgagg ttagagcagg tcataaataa cggtcatatt taaaagctaa aattttacgt 120 tttagtcaat cacatacaag cctatttaag ggctttttct tttatccatg ataattatta 180 ctaactcacg tttaaaatcg cttagaaagc aaaatatgag cttataggac tgctcaaagt 240 gtctcattcc tacaaagtag ccacgaccgt tagggagttc tttttagtgg cagaatgtat 300 ctaatataaa atcagagtgt acaagcggag cgacaagagc aacgcaggga gtttaaattt 360 agaacctcaa ttcaatggtt ttgacttttt cttttgacct tgatttttag attttgaaac 420 gaagtgaaaa aaggcgaagc ctatattaat ttatcatata tattttaatc ttttgttctt 480 ttgcgtgaaa aaaaagtcag tgttagtgag gggttacaga attatatcaa cacaaaaaac 540 agtgtatatc aacacaaaaa acagtgtata tcaacacaaa aaacagtgta tatcaacaca 600 aaaacacttt cgtttgtgtt gatatcgtgg tataataaaa gcatagagaa atcatgacgg 660 caaaatcagt ttctctatac ctaattcaaa aacactcaca aaggagcgta tttacatgcc 720 tattatatca gaaaaacaaa acaatcaaaa gcaggtgcta accttgaatg aacttgaaaa 780 acgtaaagtg gtggagcata acagcctcat tacctcaata gccaaaatgg ataaaacgcc 840 cttgaaaatg tttgaattgg cggtgtcttg cattgatacg gaaaagccac ttgaagataa 900 taccgtgtat ctttcaaaaa aagacctttt cgctttcttt aaggtgtctg ataatgacaa 960 acacagtcgt tttaaagaag cggttgagaa aatgcagaaa caagcctttt tcaaaatcaa 1020 agaaaaaaaa gataaaggtt ttgagtttga aaatattgtg ccgattcctt acgtcaagtg 1080 gacagattat aacgatgaag tgttaattcg tttcagtcct gaaattatcc cctacttagt 1140 caatctcaaa aaaaatttca cgcaacatgc cttatctgac cttgcagaac tcaatagcaa 1200 gtattctatt attctttacc gttggttgtc tatgaactac aaccaatacg agcattatag 1260 tgttaaaggg ggacggagag cggagcaggt agaatcctac cgtaatccct caattagtat 1320 taaagagttg cgagagatga cagatacgat taatgagtat aagctaatgc accaatttac 1380 agagcgaata ttaaaagaac ctttagaaga aatcaacgct cacacctctt ttaatgtgtc 1440 ctatgagaaa gtcaaaaaag ggcgttcgat tgatagcatt gtctttcata ttgagaagaa 1500 acgcatggca gacgataaca gttacaagtt ggacgatagg gcttatcaag aagataaagc 1560 acgtaaagct gaaacagaag acgaattagt cttgcaggca atcaatagcc cttatactaa 1620 gttacttatg gaacatttct tattgtctta tcttgacctt atggacataa agatattggc 1680 aggcttacag aaaaacgttt atccgcttta tgacgaactg aaagacttac gagggcttaa 1740 tggcgtgaaa gaccacttgt cttatgtggg agctaaacaa gaggactact caaagaaaaa 1800 tatctgtaag taccttaaaa aagccattga acaatatcta ccaacggtta aaagacagga 1860 cttatgatga gtgaaaagtt aaagacaatc aaagagttgg cggacgagtt aggggtaagt 1920 aaatcatatg ttgataagat aatacgcata ctcaaattgc atactaaatt agataaagta 1980 ggtaataagt atgtaatttc taaaaagcaa gaaaaatcta taataacaag gattgaaaat 2040 tctaaatcaa caactgaaac gcatactgaa tcgacaactc aatcgcacac taaagttgat 2100 gcagaagttg attttttgaa agaagaaatc gcatatctta aaagtaatca cgataaacaa 2160 ttgaccaaca aagacaaaca gatagaaacc ttaagcaatc tattagacca gcaacagcga 2220 ttagctttgc aagataaaaa gttgctagaa gaatacaagg cagaaataaa cgacttaaaa 2280 gccctaaaaa tgccctcaga ggacacgaaa gaggaacaat caaattatcg ttcactagaa 2340 aaagaaaagg actttgtaca aaccatacaa gaatcttatg aatctgaaat caaagtctta 2400 aatcaaaaac tagctgaaca agaagaacaa atacaggaga tacaaaaaga aaaagaaacc 2460 aaagaaaaaa aatggtttca gttttggaag tgaggtaatt tatggcacaa acctttgata 2520 gaaaaatttt aagagcctta caagataatg gtgtaagaga aatcagagct tatgaagtcg 2580 tttcaaaacg tttgacaatc tttcaaacag acagaggaac gtttaaatat agcgatagtt 2640 tatatcggct agttgcccca agacaagaat tatggaggaa ttgcacgact ggttttattt 2700 cagaagaaaa ataccatttc tacaaaaaat aaaatatcta agtttgaaag aataaataaa 2760 agcccttaaa aatgatttta gggcttatta ttattcaagt ggcataattc tactcaaaac 2820 catttaaaag ggcttaaaag gcaaaatatg agcttatagg acgattcaag cattaaaggg 2880 agtgaaaaat ttatttttca atttctttag tgctttttcg ttggtttgct caacgacagg 2940 agcagtcaga ttgaaaatct gaaatatatt caaattattt tcctaagagc gcacttacat 3000 accatgaaaa atcatggtat aaaatgccaa tattttagat taaacgtgtt ggaaaaactc 3060 gctttgctca tgtaaataaa aacgttataa agtattatag cgagcttagt aagtggatat 3120 ccacttacgg taaaaagggt tctgttgcga agtcaaagat ttatacgaag atgtcttaaa 3180 agaatttgaa attaagctct aatttttttc aaaaaggggg attgggggac accaccaaaa 3240 ataaaaatat tcgtctgaaa cgaacaaaaa taaaattgga aattttaggt tttgtgagtg 3300 aaagatgaat actttttact gtaagtgtag ccacacttgc taagttcacc taaagacact 3360 aacccactat tttgggcttt tagagttgac agtagtttga aaggttgaca agatgaaaaa 3420 aatcaaaaat cgtgagagaa atattttaaa aaggttcttc gtaaatgaaa aagaagacga 3480 aagaattgat gtctaattat caaaatcaat tagaaaattt ggaagaaaaa attcaagaag 3540 tggttcatta tatttcggag ggctagaaaa aatgacagtg atttatatgc cgaaacaatc 3600 ga 3602 //