ID   OP306073; SV 1; linear; genomic DNA; STD; INV; 634 BP.
XX
AC   OP306073;
XX
DT   14-JUN-2023 (Rel. 144, Created)
DT   15-JUN-2023 (Rel. 144, Last updated, Version 1)
XX
DE   Palaemonella rubrolineata isolate UO-2007 cytochrome c oxidase subunit I
DE   (COX1) gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Palaemonella rubrolineata
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Palaemonoidea; Palaemonidae; Palaemonella.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-634
RX   PUBMED; 37044890.
RA   Fransen C.H.J.M., Veer E.V., Frolova P.;
RT   "A new species of scleractinian associated shrimp of the genus Palaemonella
RT   (Crustacea, Decapoda, Palaemonidae) with a redescription of Palaemonella
RT   orientalis Dana, 1852";
RL   Zootaxa 5214(4):557-580(2022).
XX
RN   [2]
RP   1-634
RA   Frolova P.;
RT   ;
RL   Submitted (25-AUG-2022) to the INSDC.
RL   Department of Biology and Ecology, University of Ostrava, Chittussiho 10,
RL   Ostrava 71000, Czech Republic
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DR   MD5; d1485979f944e416a9751288a420ae99.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..634
FT                   /organism="Palaemonella rubrolineata"
FT                   /organelle="mitochondrion"
FT                   /host="Pocillopora damicornis"
FT                   /isolate="UO-2007"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia: Raja Ampat Islands"
FT                   /specimen_voucher="RMNH.CRUS.D.53070"
FT                   /collected_by="C.H.J.M. Fransen"
FT                   /collection_date="02-Dec-2007"
FT                   /PCR_primers="fwd_name: COI LCO1490,
FT                   fwd_seq:ggtcaacaaatcataaagatattgg, rev_name: COI HCO2198,
FT                   rev_seq:taaacttcagggtgaccaaaaaatca"
FT                   /db_xref="taxon:2974998"
FT   gene            <1..>634
FT                   /gene="COX1"
FT   CDS             <1..>634
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COX1"
FT                   /product="cytochrome c oxidase subunit I"
FT                   /protein_id="UVK02992.1"
FT                   /translation="VGTSLSLLIRAELGQPGSLIGNDQIYNVIVTAHAFVMIFFMVMPI
FT                   MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLSSSMVESGVGTGWTVYPPL
FT                   SGVIAHAGPAVDLGIFSLHLAGVSSILGAVNFITTVMNMRPKGMTMDRMPLFVWAVFLT
FT                   AILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG"
XX
SQ   Sequence 634 BP; 159 A; 111 C; 128 G; 236 T; 0 other;
     gtaggaactt ctctaagtct tctaatccga gctgaattag gtcaacctgg aagacttatt        60
     ggtaatgacc aaatttacaa tgttattgta actgcccacg cttttgtaat aatttttttt       120
     atagttatac ctattataat cggtgggttt ggtaattgac tggttccttt aatattaggg       180
     gctccggata tagcattccc ccgaataaat aatataagat tttgactttt acccccttct       240
     ttgacactct tgctttctag gagaatagta gaaagggggg ttggaacagg gtgaacagtg       300
     tacccgcctt tatcaggagt tattgcccat gcggggcctg ctgtagattt aggtattttt       360
     tctttacatt tagctggtgt ttcttctatt ttaggggcag taaattttat tactacagta       420
     ataaacatac ggcctaaagg aataactatg gaccggatgc ctttgtttgt ttgagccgta       480
     tttttaacag cgattttact tttattatct ttgcctgttt tagccggagc aattacaatg       540
     cttttaactg accggaattt aaatacttca ttttttgacc ctgcaggagg gggggaccct       600
     attctctacc agcatttatt ttgatttttt ggtc                                   634
//