ID   OM311639; SV 1; linear; genomic DNA; STD; PLN; 1235 BP.
XX
AC   OM311639;
XX
DT   14-JUN-2023 (Rel. 144, Created)
DT   15-JUN-2023 (Rel. 144, Last updated, Version 1)
XX
DE   Nitella sonderi voucher LE<RUS>:A0001491 ribulose-1,5-bisphosphate
DE   carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast.
XX
KW   .
XX
OS   Nitella sonderi
OC   Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales; Characeae;
OC   Nitella.
OG   Plastid:chloroplast
XX
RN   [1]
RC   DOI: 10.5252/cryptogamie-algologie2022v43a13
RP   1-1235
RA   Romanov R.E., Vidal-Russell R., Nikulin V.Y., Gontcharov A.A.,
RA   Quiroga M.P.;
RT   "Nitella sonderi A.Braun (Charales, Charophyceae) - a New Record for South
RT   America, and First Record from Outside Australia";
RL   Cryptogam Algol 43(13):201-213(2022).
XX
RN   [2]
RP   1-1235
RA   Romanov R.E., Vidal-Russell R., Nikulin V.Y., Gontcharov A.A.,
RA   Quiroga M.P.;
RT   ;
RL   Submitted (18-JAN-2022) to the INSDC.
RL   Laboratory of Botany, Federal Scientific Center of the East Asia
RL   Terrestrial Biodiversity of the FEB RAS, 100-letia Vladivostoka prospect,
RL   159, Vladivostok, Primorsky Krai 690022, Russia
XX
DR   MD5; c77adb7a1251a30c027d9dcdf3a5d5de.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1235
FT                   /organism="Nitella sonderi"
FT                   /organelle="plastid:chloroplast"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia: Queensland"
FT                   /isolation_source="abundant in c. 8 inches of water, mud
FT                   bottom, creek in deep valley (Black Creek?). 50.9 mi. S of
FT                   Miriam Vale on road to Gin Gin"
FT                   /specimen_voucher="LE<RUS>:A0001491"
FT                   /collected_by="R.D. Wood No. 60-11-30-10"
FT                   /collection_date="30-Oct-1960"
FT                   /identified_by="M. Casanova"
FT                   /PCR_primers="fwd_name: rbcL-RH1,
FT                   fwd_seq:atgtcaccacaaacagaaactaaagc, rev_name: rbcL-1379R,
FT                   rev_seq:tcacaagcagcagctagttcaggactc"
FT                   /db_xref="taxon:2911850"
FT   gene            <1..>1235
FT                   /gene="rbcL"
FT   CDS             <1..>1235
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="rbcL"
FT                   /product="ribulose-1,5-bisphosphate carboxylase/oxygenase
FT                   large subunit"
FT                   /protein_id="WBQ90814.1"
FT                   /translation="EYKTKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTD
FT                   GLTSLDRYKGRCYDIEPVAGEDNQYIAYVAYPLDLFEEGSVTNLFTSIVGNVFGFKALR
FT                   ALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVY
FT                   ECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKSQAETGEIKGHYLNATAGHCDE
FT                   MLKRAECAKELGMPIIMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDRQKNHG
FT                   MHFRVLAKALRLSGGDHVHSGTVVGKLEGEREVTLGFVDLLRDDYIEKDRSRGVYFTQD
FT                   WVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEA
FT                   CVQARNEGRDLA"
XX
SQ   Sequence 1235 BP; 359 A; 188 C; 283 G; 401 T; 4 other;
     tgagtataaa actaaagata ctgatatttt agctgcattt cgtgtaactc cacaacctgg        60
     agttccacct gaagaggcgg gtgctgcggt agctgcagag tcttctactg gtacatggac       120
     tactgtttgg actgacggat taactagttt agacagatac aaaggtcgat gttatgatat       180
     tgaacctgtt gctggtgagg ataatcaata tattgcatat gtagcttatc ctcttgattt       240
     atttgaagaa ggatcagtaa ctaatttatt tacctcaatt gtaggtaatg tatttggatt       300
     taaagcatta agagctttac gtttggaaga tttacgtatc cctcctgcat atgtaaaaac       360
     ttttcagggt cctccgcatg gtattcaagt tgaaagagat aaactgaata agtatggacg       420
     accattacta ggatgtacaa ttaagcctaa attaggttta tcagctaaaa attatggtag       480
     agctgtatat gaatgtcttc gtggtggact tgattttaca aaagatgatg aaaatgtaaa       540
     ctcccagcct tttatgcgtt ggagagaccg tttcttgttt gtagcagaag ctatttataa       600
     atctcaagca gagacgggag aaataaaagg gcattatcta aacgctactg caggacattg       660
     tgatgaaatg cttaagagag cagaatgtgc aaaagagtta ggtatgccta ttattatgca       720
     tgattatttg acaggaggat ttactgctaa tactactcta gctcattatt gtcgagataa       780
     tggtttactt cttcatattc accgtgctat gcatgctgta attgatcgtc aaaaaaatca       840
     tggtatgcat tttcgtgttt tggctaaagc tcttcgtctt tctggtggag atcacgtaca       900
     ttctggtact gtagttggca aattagaagg agaacgtgaa gttactttag gttttgtaga       960
     tttactacgt gaygattata ttgagaaaga yagaagtcgc ggtgtttatt ttactcarga      1020
     ttgggtgtct ttaccagggg tattacctgt agcttcaggc ggaattcatg tttggcacat      1080
     gcctgcatta actgaaattt ttggtgatga ttctgtatta caatttggag gaggcacttt      1140
     aggtcaccct tggggaaatg ctccaggagc tgtggctaac cgagtagctt tagaagcttg      1200
     ygtacaagct cgtaatgaag gaagagattt agctc                                 1235
//