ID   MZ615191; SV 1; linear; genomic DNA; STD; INV; 341 BP.
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AC   MZ615191;
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DT   27-AUG-2021 (Rel. 144, Created)
DT   27-AUG-2021 (Rel. 144, Last updated, Version 1)
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DE   Apodera vas isolate EM2543-22 cytochrome c oxidase subunit 1-like protein
DE   (COI) gene, partial cds; mitochondrial.
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KW   .
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OS   Apodera vas
OC   Eukaryota; Amoebozoa; Tubulinea; Elardia; Arcellinida; Difflugina;
OC   Hyalospheniidae; Apodera.
OG   Mitochondrion
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-341
RX   PUBMED; 34351666.
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   "Superficially described and ignored for 92 years, rediscovered and
RT   emended: Apodera angatakere (Amoebozoa : Arcellinida : Hyalospheniformes)
RT   is a new flagship testate amoeba taxon from Aotearoa (New Zealand)";
RL   J Eukaryot Microbiol:e12867(2021).
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RN   [2]
RP   1-341
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   ;
RL   Submitted (23-JUL-2021) to the INSDC.
RL   Laboratory of Soil Biodiversity, University of Neuchatel, Rue Emile-Argand
RL   11, Neuchatel 2000, Switzerland
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DR   MD5; 7e0a2ad1a829b573088173625167afb9.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..341
FT                   /organism="Apodera vas"
FT                   /organelle="mitochondrion"
FT                   /isolate="EM2543-22"
FT                   /mol_type="genomic DNA"
FT                   /country="New Zealand: Mt. Taranaki"
FT                   /lat_lon="39.23 S 174.12 E"
FT                   /isolation_source="soil litter and humus"
FT                   /collected_by="Edward Mitchell"
FT                   /collection_date="10-Mar-2017"
FT                   /PCR_primers="fwd_name: LCO1490,
FT                   fwd_seq:ggtcaacaaatcataaagatattgg, rev_name: HCO2198,
FT                   rev_seq:taaacttcagggtgaccaaaaaatca"
FT                   /note="PCR_primers=rev_name: ApocoxR, rev_seq:
FT                   ccwggatgnccttcaatactact"
FT                   /db_xref="taxon:499108"
FT   gene            <1..>341
FT                   /gene="COI"
FT                   /note="identical to cytochrome c oxidase subunit 1 (COX);
FT                   likely undergoes RNA editing"
FT   CDS             <1..>341
FT                   /codon_start=2
FT                   /transl_table=4
FT                   /gene="COI"
FT                   /product="cytochrome c oxidase subunit 1-like protein"
FT                   /protein_id="QZD25097.1"
FT                   /translation="TLYLLFGLLAGIIGTIFSILIRVELAYXGIQILNGNNQLYNVIVT
FT                   AHAFIMIFFMVMPAMIGGFGNWFVPLLIGAPDMAFPRLNNLSFWLLPPSFLLLLMSSFI
FT                   ETGVXTGXT"
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SQ   Sequence 341 BP; 93 A; 44 C; 69 G; 129 T; 6 other;
     aacattatat cttttgtttg gactacttgc tggtattatt gggacaatat tttcaatatt        60
     aatacgtgtg gaattagcat atncaggaat ccaaatttta aatggaaata accaattata       120
     taatgttatt gtgacagcgc atgcctttat tatgattttt ttcatggtga tgccggctat       180
     gattggagga tttggtaatt ggtttgttcc tttattgata ggggcacccg atatggcatt       240
     tccgcgattg aataatttga gtttttgact attaccaccg tcatttttat tattattgat       300
     gtcaagtttt atcgagacag gngtnngaac aggnngaaca g                           341
//