ID   MZ615186; SV 1; linear; genomic DNA; STD; INV; 658 BP.
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AC   MZ615186;
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DT   27-AUG-2021 (Rel. 144, Created)
DT   27-AUG-2021 (Rel. 144, Last updated, Version 1)
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DE   Apodera angatakere isolate EM2540-11 cytochrome c oxidase subunit 1-like
DE   protein (COI) gene, partial cds; mitochondrial.
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KW   .
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OS   Apodera angatakere
OC   Eukaryota; Amoebozoa; Tubulinea; Elardia; Arcellinida; Difflugina;
OC   Hyalospheniidae; Apodera.
OG   Mitochondrion
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-658
RX   PUBMED; 34351666.
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   "Superficially described and ignored for 92 years, rediscovered and
RT   emended: Apodera angatakere (Amoebozoa : Arcellinida : Hyalospheniformes)
RT   is a new flagship testate amoeba taxon from Aotearoa (New Zealand)";
RL   J Eukaryot Microbiol:e12867(2021).
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RN   [2]
RP   1-658
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   ;
RL   Submitted (23-JUL-2021) to the INSDC.
RL   Laboratory of Soil Biodiversity, University of Neuchatel, Rue Emile-Argand
RL   11, Neuchatel 2000, Switzerland
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DR   MD5; 25f1824af6eaa5469fd7abf7a3dd2cd2.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..658
FT                   /organism="Apodera angatakere"
FT                   /organelle="mitochondrion"
FT                   /isolate="EM2540-11"
FT                   /mol_type="genomic DNA"
FT                   /country="New Zealand: Mt. Taranaki"
FT                   /lat_lon="39.26 S 174.04 E"
FT                   /isolation_source="peatland; sphagnum mosses"
FT                   /collected_by="Linnea Mitchell"
FT                   /collection_date="03-Oct-2017"
FT                   /PCR_primers="fwd_name: LCO1490,
FT                   fwd_seq:ggtcaacaaatcataaagatattgg, rev_name: HCO2198,
FT                   rev_seq:taaacttcagggtgaccaaaaaatca"
FT                   /note="PCR_primers=fwd_name: Arcelcox1F, fwd_seq:
FT                   caaaatcataaagatattggdac"
FT                   /db_xref="taxon:2870870"
FT   gene            <1..>658
FT                   /gene="COI"
FT                   /note="identical to cytochrome c oxidase subunit 1 (COX);
FT                   likely undergoes RNA editing"
FT   CDS             <1..>658
FT                   /codon_start=2
FT                   /transl_table=4
FT                   /gene="COI"
FT                   /product="cytochrome c oxidase subunit 1-like protein"
FT                   /protein_id="QZD25092.1"
FT                   /translation="LYLIFGLIAGIIGTLFSVLIRIELAYPGIQILNGNNQLYNVIVTA
FT                   HAFIMIFFMVMPAMIGGFGNWFVPLLIGAPDMAFPRLNNLSFWLLPPSFFLLLMSSFIE
FT                   IGVGTGWTVYXPLSSEGHPGAAVDFAIFSLHLAGLSSILGAINFIVTILNMRVPGYRMD
FT                   LIPLFVXXILITAILLLLSLPVLAAAITMLLTDRNFNTSFFDPTGGGDPILYQHLF"
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SQ   Sequence 658 BP; 161 A; 91 C; 121 G; 281 T; 4 other;
     tttgtattta atttttggtt taattgcagg aattattgga actctttttt ctgtattaat        60
     tcgcatagaa ttagcatatc cggggatcca aattttaaat ggtaacaatc agttatataa       120
     tgttattgtt actgcccatg cgttcattat gatttttttt atggtgatgc cagctatgat       180
     tggtggattt ggtaattgat ttgtaccttt attaataggg gctcctgata tggcttttcc       240
     tcgattaaac aatttaagtt tttgattgct tccaccatca ttttttttat tattgatgtc       300
     aagttttatt gaaattggtg taggtactgg ttgaacagta tatncaccct taagtagtga       360
     aggccatcca ggtgcagcgg ttgattttgc gatttttagt ttacatttgg ctggactttc       420
     atctatttta ggtgcnatta attttattgt aacaatttta aatatgaggg ttcctggtta       480
     tcgtatggac ttaattccgc tatttgtttg nngcattctt attactgcga ttttgttatt       540
     attatcccta cctgttttag ctgcagctat tacgatgttg ttaacagatc gaaattttaa       600
     tacatcattt tttgatccaa caggtggagg tgatccaatt ttgtaccaac atttgttt         658
//