ID   MT523148; SV 1; linear; genomic DNA; STD; VRT; 651 BP.
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AC   MT523148;
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DT   30-MAR-2022 (Rel. 144, Created)
DT   11-APR-2022 (Rel. 144, Last updated, Version 2)
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DE   Haplochromis schubotzi voucher RMCA:2017.006.P - DNA1318 cytochrome c
DE   oxidase subunit I (COX1) gene, partial cds; mitochondrial.
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KW   .
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OS   Haplochromis schubotzi
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC   Pseudocrenilabrinae; Haplochromini; Haplochromis.
OG   Mitochondrion
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RN   [1]
RC   Publication Status: Available-Online prior to print DOI:
RC   10.1007/s10750-022-04812-0
RP   1-651
RA   Decru E., Vranken N., Maetens H., Mertens De Vry A., Kayenbergh A.,
RA   Snoeks J., Van Steenberge M.;
RT   "DNA barcoding the Lake Edward basin: high taxonomic coverage of a tropical
RT   freshwater ichthyofauna";
RL   Hydrobiologia 0:0-0(2022).
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RN   [2]
RP   1-651
RA   Decru E., Maetens H., Van Steenberge M., Vranken N., Kayenbergh A.,
RA   Mertens A., Snoeks J.;
RT   ;
RL   Submitted (26-MAY-2020) to the INSDC.
RL   Biology Department, Section Vertebrates, Royal Museum for Central Africa,
RL   Leuvensesteenweg 13, Tervuren 3080, Belgium
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DR   MD5; 0dde566e8e1fd6efcb056f2676242f19.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..651
FT                   /organism="Haplochromis schubotzi"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Uganda: Bought at Rwenshama landing site, Lake
FT                   Edward"
FT                   /lat_lon="0.4 S 29.77 E"
FT                   /specimen_voucher="RMCA:2017.006.P - DNA1318"
FT                   /collection_date="25-Mar-2017"
FT                   /PCR_primers="fwd_name: VF2_t1,
FT                   fwd_seq:tgtaaaacgacggccagtcaaccaaccacaaagacattggcac,
FT                   rev_name:FishR2_t1,
FT                   rev_seq:caggaaacagctatgacacttcagggtgaccgaagaatcagaa"
FT                   /PCR_primers="fwd_name: FishF2_t1,
FT                   fwd_seq:tgtaaaacgacggccagtcgactaatcataaagatatcggcac,
FT                   rev_name:FR1d_t1,
FT                   rev_seq:caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:2739687"
FT   gene            <1..>651
FT                   /gene="COX1"
FT   CDS             <1..>651
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="COX1"
FT                   /product="cytochrome c oxidase subunit I"
FT                   /protein_id="QKE24094.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEVG
FT                   AGTGWTVYPPLSGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
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SQ   Sequence 651 BP; 154 A; 184 C; 113 G; 200 T; 0 other;
     ctctatctag tatttggtgc ttgggccgga atagtaggaa ccgcacttag cctcctaatt        60
     cgggcagaac taagccaacc cggcgctctc ctcggagatg atcagattta taatgtaatc       120
     gttacagcac atgcttttgt aataattttc tttatagtca tgccaattat gattggaggc       180
     tttggaaact gactagtacc tcttataatt ggtgcccccg acatagcctt ccctcgaata       240
     aacaatataa gcttctgact ccttccccct tcattcctcc tcctccttgc ctcttccgga       300
     gttgaagtag gggccggcac aggatgaact gtttaccccc cactctcagg caatctcgcc       360
     cacgcagggc cttctgtcga tttaaccatc ttctcccttc atttggctgg ggtatcgtct       420
     attcttggcg caattaattt tattacaaca attattaaca taaaaccccc tgccatctct       480
     cagtaccaaa cacctttgtt tgtgtggtcc gtcctaatca ccgcagtatt acttttacta       540
     tcactacccg tgcttgctgc cggtatcacc atacttctta cagaccgaaa tcttaataca       600
     accttctttg accctgctgg aggaggagac cccatccttt atcaacactt a                651
//