ID   MN250034; SV 1; linear; genomic DNA; STD; INV; 1613 BP.
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AC   MN250034;
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DT   04-JAN-2020 (Rel. 143, Created)
DT   04-JAN-2020 (Rel. 143, Last updated, Version 1)
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DE   Thalassoalaimus sp. 2 TJP-2019 voucher Nem.25 small subunit ribosomal RNA
DE   gene, partial sequence.
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KW   .
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OS   Thalassoalaimus sp. 2 TJP-2019
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Enoplida; Ironina;
OC   Ironoidea; Oxystominidae; Oxystomininae; Thalassoalaimus;
OC   unclassified Thalassoalaimus.
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RN   [1]
RP   1-1613
RA   Pereira T.J., De Santiago A., Schuelke T., Hardy S.M., Bik H.M.;
RT   "The impact of intragenomic rRNA variation on alphadiversity estimates in
RT   metabarcoding studies: a case study from marine nematodes";
RL   Unpublished.
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RN   [2]
RP   1-1613
RA   Pereira T.J., De Santiago A., Schuelke T., Hardy S.M., Bik H.M.;
RT   ;
RL   Submitted (01-AUG-2019) to the INSDC.
RL   Department of Nematology, University of California, Riverside, 900
RL   University Avenue, Riverside, CA 92521, USA
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DR   MD5; 0038731edf2576cfa42e3e189c8f3c3c.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1613
FT                   /organism="Thalassoalaimus sp. 2 TJP-2019"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Arctic, Beaufort Sea"
FT                   /isolation_source="marine sediment"
FT                   /specimen_voucher="Nem.25"
FT                   /collection_date="2012"
FT                   /identified_by="Pereira, T.J."
FT                   /note="Sample B1.200A, 200 m depth"
FT                   /db_xref="taxon:2600005"
FT   rRNA            <1..>1613
FT                   /product="small subunit ribosomal RNA"
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SQ   Sequence 1613 BP; 415 A; 348 C; 432 G; 418 T; 0 other;
     agatcatcct tcttacttgg ataactgtgg aaaagctaga gctaatacat gctacaagct        60
     ctgaccttac ggaaggagcg catttattag aacaaaacca atcggacttt gtccgtcatt       120
     tggtgaatct gaataactat gcagatcgca cggtcttaga accggcgaca tatctttcaa       180
     atgtctgcct tatcaacttt cgatggtagt ttatgcgcct accatggttg taacgggtaa       240
     cgaagaatca gggtttgatt tcggagaggg agcctgagaa acggctacca catccaagga       300
     aggcagcagg cacgcaaatt acccactccc ggcacgggga ggtagtgacg aaacataacg       360
     aggcgattct ctacgagact cgccatcgga atgggtacaa tctaaatcct ttaacgagga       420
     tctattggag ggcaagtctg gtgccagcag ccgcggtaat tccagctcca atagcgtata       480
     ttaacgttgt tgcgtttaaa aagctcgtag ttggatctgc gacctaggat agcggtctgc       540
     caaacggtgt gtactgctct ttctggtctt gttgtccggt tttcccttga tgctctttgt       600
     tgagtgtcct gggtggctgg agagtttact ttgaaaaaat tagagtgctc aaagcaggcg       660
     gtctgcctga ataatggtgc atggaataat ggaataggac ctcggttcta ttttgttggt       720
     tttcggagca cgaggtaatg attaaaaggg acagacgggg gcattcgtat tgtggcgcta       780
     gaggtgaaat tcttggaccg ccgcaagacg aactactgcg aaagcatttg ccaagaatgt       840
     tttcattaat caagaacgaa agttagaggt tcgaaggcga tcagataccg ccctagttct       900
     aaccgtaaac gatgccatct agcgatccgc aggagttaaa tttatgactc tgcgggaagc       960
     ttccgggaaa ccaaagtttt tgggttccgg gggaagtatg gttgcaaagc tgaaacttaa      1020
     aggaattgac ggaagggcac caccaggagt ggagcctgcg gcttaatttg actcaacgcg      1080
     gggaaactca cccggcccgg acaccgtaag gattgacaga ctgatagctc tttcttgatt      1140
     cggtggatgg tggtgcatgg ccgttcttag ttggtggagc gatttgtctg gttaattccg      1200
     ataacgaacg agactctatc ctactaacta gacagcgaat ttggctgttc gttgcgcttc      1260
     ttagagggac aaggggtttc taaccccacg aaagtgagca ataacaggtc tgtgatgccc      1320
     ttagatgtcc ggggccgcac gcgcgctaca atgaaggaat caacgtgtat caaaacctgc      1380
     tttggaaaga ctgggtaacc agttcaaatt ccttcgcgct tgggacaggg acttgcaact      1440
     atttcccttg aacgaggaat tcctcgtaag tgtgagtcat catctcgcgt tgaatatgtc      1500
     cctgcccttt gtacacaccg cccgtcgcta ctaccgactg gatgatttag tgaggtcttc      1560
     ggactggtac cgatgcggct tcgcggttgc attggtgtcc ggaaagaaaa ctc             1613
//