ID   MG766261; SV 1; linear; genomic DNA; STD; INV; 1298 BP.
XX
AC   MG766261;
XX
DT   09-NOV-2018 (Rel. 138, Created)
DT   09-NOV-2018 (Rel. 138, Last updated, Version 1)
XX
DE   Caparinia ictonyctis voucher UMMZ BMOC 13-0508-003 AD1647 elongation factor
DE   1-alpha gene, partial cds.
XX
KW   .
XX
OS   Caparinia ictonyctis
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari;
OC   Acariformes; Sarcoptiformes; Astigmata; Psoroptidia; Sarcoptoidea;
OC   Psoroptidae; Caparinia.
XX
RN   [1]
RP   1-1298
RA   Klimov P.B., Kim D.-H., Skoracki M., Bochkov A.V.;
RT   "Species delimitation in the 'gray zone' of CO1 barcoding: Validation of
RT   the status the mange mite Caparinia ictonyctis stat. res. (Acariformes:
RT   Psoroptidae) parasitizing captive African hedgehog, Atelerix albiventis";
RL   Unpublished.
XX
RN   [2]
RP   1-1298
RA   Klimov P.B., Kim D.-H., Skoracki M., Bochkov A.V.;
RT   ;
RL   Submitted (07-JAN-2018) to the INSDC.
RL   Ecology and Evolutionary Biology (EEB), Museum of Zoology, University of
RL   Michigan, 1109 Geddes Ave. #2041, Ann Arbor, MI 48109, USA
XX
DR   MD5; 818397d8c089cf3c0d480c650f68ffee.
DR   EuropePMC; PMC6321676; 30611284.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Sequencher v. 5.4.6
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Caparinia ictonyctis"
FT                   /host="Atelerix albiventris"
FT                   /mol_type="genomic DNA"
FT                   /country="South Korea"
FT                   /specimen_voucher="UMMZ BMOC 13-0508-003 AD1647"
FT                   /collected_by="S. S. Shin (via A. Bochkov)"
FT                   /collection_date="01-Mar-2013"
FT                   /db_xref="taxon:2480858"
FT   mRNA            join(<1..103,174..>1298)
FT                   /product="elongation factor 1-alpha"
FT   CDS             join(<1..103,174..>1298)
FT                   /codon_start=2
FT                   /product="elongation factor 1-alpha"
FT                   /db_xref="GOA:A0A3G2LZR2"
FT                   /db_xref="InterPro:IPR000795"
FT                   /db_xref="InterPro:IPR004160"
FT                   /db_xref="InterPro:IPR004161"
FT                   /db_xref="InterPro:IPR004539"
FT                   /db_xref="InterPro:IPR009000"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR031157"
FT                   /db_xref="UniProtKB/TrEMBL:A0A3G2LZR2"
FT                   /protein_id="AYN79480.1"
FT                   /translation="HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQDMGKGSFKYAWV
FT                   LDKLKAERERGITIDITLWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADVAVLIVAA
FT                   GTGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDTTEPPFSQSRFEEIQKEVSAY
FT                   VKKIGYNPATVAFVPISGWNGDNMLEPSTNMTWFKGWSIERKGQKFEGKTLLQALDAQE
FT                   PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGCVVTFAPAGITTEVKSVEMH
FT                   HEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKDNPPKGCEEFTAQVIVLNHPGQIA
FT                   NGYTPVLDCHTAHIACKFKEIKEKCDRRSGKKLEDMPKSIKSGDAAIIDLAPTKPMCVE
FT                   TFTEFPPLGR"
XX
SQ   Sequence 1298 BP; 414 A; 230 C; 265 G; 389 T; 0 other;
     tcatgtcgat tcgggtaaat cgacaacaac tggacatttg atctataaat gtggtggtat        60
     cgataaacgt accattgaaa aattcgaaaa agaagctcaa gatgtaagaa tttttttttt       120
     catttaattt tttttaattt aatttatatt gaataaatta tcaatttaat tagatgggta       180
     aaggttcatt caaatatgcc tgggttttgg ataaattaaa agctgaacgt gaacgtggta       240
     ttacgatcga tattacatta tggaaattcg aaacaccaaa atattatgta actgttatcg       300
     atgctcctgg tcacagagat ttcattaaaa acatgatcac tggtacttct caagctgatg       360
     ttgctgtatt gattgtagct gctggtactg gtgaatttga agctggtatc tctaaaaatg       420
     gtcaaacacg tgaacatgct ttgcttgcct atactttggg tgtcaaacaa ttgattgttg       480
     gtgtaaacaa aatggacacc actgaaccac cattctcgca atctcgtttc gaagaaattc       540
     aaaaagaagt ctcagcttat gtaaaaaaga ttggttacaa tccagcaacc gttgcttttg       600
     taccaatttc cggatggaat ggtgacaaca tgttggaacc atcaaccaac atgacatggt       660
     tcaaaggatg gtctattgaa cgtaaaggac aaaaattcga aggtaaaaca ttgttgcaag       720
     ctttggatgc ccaagaacca ccaactcgtc caactgacaa accacttcga ttgccattgc       780
     aagatgtgta caagattggt ggtattggta ccgtacctgt tggtcgtgtt gaaactggtg       840
     tattgaaacc aggttgtgtt gtcacttttg ctccggctgg tatcaccact gaagtcaaat       900
     ctgtcgaaat gcaccacgaa gccttgcaag aagctgttcc tggtgataat gtcggtttca       960
     atgttaaaaa cgtatcagtt aaagaattgc gtcgtggtta cgttgctggt gatagtaaag      1020
     acaatcctcc aaaaggctgt gaagaattta ctgcccaggt tattgtattg aatcatccag      1080
     gccaaattgc gaatggttac actccagtat tggattgtca caccgctcac attgcttgca      1140
     aattcaagga aatcaaagaa aaatgcgacc gacgttctgg aaaaaaattg gaagatatgc      1200
     ctaaatcaat taaatcaggt gatgctgcca ttatcgattt ggcaccaaca aaaccaatgt      1260
     gtgttgaaac attcacggaa tttccaccat tgggtcgt                              1298
//