ID   LC171492; SV 1; linear; genomic DNA; STD; INV; 658 BP.
XX
AC   LC171492;
XX
DT   20-OCT-2016 (Rel. 130, Created)
DT   28-NOV-2019 (Rel. 143, Last updated, Version 4)
XX
DE   Pseudocrangonyx uenoi mitochondrial COI gene for cytochrome c oxidase
DE   subunit I, partial cds, isolate: G405.
XX
KW   .
XX
OS   Pseudocrangonyx uenoi
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata;
OC   Gammarida; Crangonyctidira; Crangonyctoidea; Pseudocrangonyctidae;
OC   Pseudocrangonyx.
OG   Mitochondrion
XX
RN   [1]
RP   1-658
RA   Nakano T., Tomikawa K.;
RT   ;
RL   Submitted (28-JUL-2016) to the INSDC.
RL   Contact:Takafumi Nakano Kyoto University, Graduate School of Science,
RL   Department of Zoology; Kitashirakawa-oiwakecho, Sakyo, Kyoto 606-8502,
RL   Japan
XX
RN   [2]
RC   Publication Status: Online-Only DOI:10.3897/zse.92.10176
RA   Tomikawa K., Nakano T., Sato A., Onodera Y., Ohtaka A.;
RT   "A molecular phylogeny of Pseudocrangonyx from Japan, including a new
RT   subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae)";
RL   Zoosyst Evol 92:187-202(2016).
XX
RN   [3]
RC   DOI:10.12782/specdiv.24.259
RA   Tomikawa K., Abe Y., Nakano T.;
RT   "A New Stygobitic Species of the Genus Pseudocrangonyx (Crustacea:
RT   Amphipoda: Pseudocrangonyctidae) from Central Honshu, Japan";
RL   Species Divers. 24:259-266(2019).
XX
DR   MD5; ff0b306f0c28df4a43a38a255bc54da1.
DR   EuropePMC; PMC5345347; 28325961.
DR   EuropePMC; PMC5904333; 29674860.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..658
FT                   /organism="Pseudocrangonyx uenoi"
FT                   /organelle="mitochondrion"
FT                   /isolate="G405"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Shiga, Taga, Same Wind Cave"
FT                   /lat_lon="35.2 N 136.28 E"
FT                   /specimen_voucher="KUZ<JPN>:Z1964"
FT                   /collected_by="Yuji Abe"
FT                   /collection_date="2008-09-30"
FT                   /identified_by="Ko Tomikawa"
FT                   /db_xref="taxon:1884216"
FT   CDS             <1..>658
FT                   /codon_start=2
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome c oxidase subunit I"
FT                   /db_xref="GOA:A0A1E1GHI7"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A0A1E1GHI7"
FT                   /protein_id="BAV82342.1"
FT                   /translation="TLYFMLGAWASALGTSLSVIIRSELSVPGNLIENDQTYNVMVTAH
FT                   ALVMIFFMVMPIMIGGFGNWLVPLMLGSPDMAFPRMNNMSFWLLPPSLALLLLSSAVES
FT                   GVGTGWTLYPPLADSLGHSGASVDMAIFSLHLAGASSILGAVNFISTIINVRSPGMRLD
FT                   QMPLFVWSILITTILLLLSLPVLAGAVTMLLTDRNLNTSFFDPSGGGDPILYQHLF"
XX
SQ   Sequence 658 BP; 187 A; 125 C; 111 G; 235 T; 0 other;
     aacattatat tttatactag gagcttgagc tagagcttta ggtacatctc ttagcgtaat        60
     tattcgctct gaacttagag tacctggaaa cttaatcgaa aatgatcaaa cctataacgt       120
     tatagtaact gcacatgcgt tagtaataat ctttttcatg gtaataccta ttatgattgg       180
     aggatttggc aattgacttg ttcctcttat gctaggaagt cctgatatag ctttcccacg       240
     tatgaataat ataagatttt gattactccc tccttcacta gctttactac tattaagtag       300
     ggctgttgaa agaggagtag gaacaggctg aaccttatac cctccattag ctgattcatt       360
     aggacatagg ggagcttccg tagatatagc tattttctct ttacaccttg caggagcttc       420
     ctctattcta ggtgctgtta attttatttc aacaattatt aatgttcgca gacctgggat       480
     gcgtctagac caaatacctt tatttgtctg atcaatttta attacaacta ttttactact       540
     actttcctta ccagtcttag caggagctgt tactatacta ttgactgacc gtaatttaaa       600
     tacctcattc tttgatccaa gaggaggagg tgaccctatt ttataccaac atttattt         658
//