ID KY659176; SV 1; linear; genomic DNA; STD; VRT; 1399 BP.
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AC KY659176;
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DT 03-JAN-2018 (Rel. 135, Created)
DT 03-JAN-2018 (Rel. 135, Last updated, Version 14)
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DE Notoliparis kermadecensis voucher HADES.100350 cytochrome oxidase subunit I
DE (COI) gene, partial cds; mitochondrial.
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KW .
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OS Notoliparis kermadecensis
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Notoliparis.
OG Mitochondrion
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RN [1]
RP 1-1399
RX DOI; .11646/zootaxa.4358.1.7.
RX PUBMED; 29245485.
RA Gerringer M.E., Linley T.D., Jamieson A.J., Goetze E., Drazen J.C.;
RT "Pseudoliparis swirei sp. nov.: A newly-discovered hadal
RT snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench";
RL Zootaxa 4358(1):161-177(2017).
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RN [2]
RP 1-1399
RA Gerringer M.E., Goetze E.;
RT ;
RL Submitted (21-FEB-2017) to the INSDC.
RL Oceanography, University of Hawaii at Manoa, 1000 Pope Rd, Honolulu, HI
RL 96822, USA
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DR MD5; 38d5bcc81b69638a5fd98c9229ebae00.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1399
FT /organism="Notoliparis kermadecensis"
FT /organelle="mitochondrion"
FT /mol_type="genomic DNA"
FT /specimen_voucher="HADES.100350"
FT /tissue_type="white muscle"
FT /db_xref="taxon:2059685"
FT gene <1..>1399
FT /gene="COI"
FT CDS <1..>1399
FT /codon_start=1
FT /transl_table=2
FT /gene="COI"
FT /product="cytochrome oxidase subunit I"
FT /db_xref="GOA:A0A2H4Z4S7"
FT /db_xref="InterPro:IPR000883"
FT /db_xref="InterPro:IPR023615"
FT /db_xref="InterPro:IPR023616"
FT /db_xref="InterPro:IPR033944"
FT /db_xref="InterPro:IPR036927"
FT /db_xref="UniProtKB/TrEMBL:A0A2H4Z4S7"
FT /protein_id="AUF49238.1"
FT /translation="LVFGAWAGMVGTGLSLLIRAELSQPGALLGDDQIYNVIVTAHAFV
FT MIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAG
FT TGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTP
FT LFVWSLLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP
FT EVYILILPGFGMVSHIVAYYSGKKEPFGHMGMVWAMMAIGFLGFIVWAHHMFTVGMDVD
FT TRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIILA
FT NSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYSLHSTWTKAHFGIMF
FT LGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLIAVLMFLFIIWEAFA
FT AKREVLAV"
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SQ Sequence 1399 BP; 325 A; 367 C; 245 G; 462 T; 0 other;
ctagtatttg gtgcttgagc tgggatggtg ggaacaggcc tgagtttatt aattcgggcc 60
gaacttagcc aacccggggc ccttttaggc gacgatcaaa tttacaacgt aattgtcaca 120
gcacatgcct tcgtaataat tttctttata gtaataccaa ttataatcgg aggtttcgga 180
aattgactcg tccccctaat gattggtgcc cctgatatag cctttcctcg aataaataat 240
ataagctttt ggcttcttcc accctctttc ttactccttc ttgcctcttc tggtgtagaa 300
gcaggggccg gaaccgggtg aaccgtctac cctccccttg ctggtaattt agcccatgct 360
ggagcttctg tagacctaac aattttttct ctacatttag caggaatctc ttcaattctt 420
ggggcaatta attttattac aaccatcatc aacatgaaac cccctgctat atctcaatat 480
cagacccctc ttttcgtatg gtccctactc attaccgccg tacttctcct tctctctctc 540
cccgtccttg ctgccggcat caccatgctt ctaacagatc gtaaccttaa cacaacattc 600
tttgaccccg cagggggcgg agacccaatt ctctaccaac accttttctg attctttggc 660
caccccgaag tttatattct tattctcccc ggcttcggaa tagtttccca tattgtagca 720
tattactctg gcaaaaaaga accttttggc cacataggaa tggtttgagc cataatagct 780
atcggatttc taggctttat cgtgtgagca catcacatat ttacagtagg aatagatgta 840
gacactcgtg cttattttac ctccgccaca ataattatcg ctatccctac aggcgttaaa 900
gtctttagct gacttgctac tttacatggg ggctctatta aatgagaaac cccccttctg 960
tgagctcttg ggtttatctt tctttttacc gtcgggggcc taacaggcat tatccttgcc 1020
aattcatctc ttgacattgt tttacatgat acctactatg tagttgccca cttccactat 1080
gtcttatcta tgggggctgt tttcgccatc atagctggtt ttgtacactg atttccactt 1140
ttctcaggct attctcttca cagtacatga acaaaagccc acttcggcat catatttttg 1200
ggtgtcaatc tcactttctt cccccagcac tttctcggct tagccgggat acctcgacga 1260
tattcagatt acccagacgc ctacacctta tgaaatactg tttcttccat tgggtcccta 1320
atctcattaa tcgcagtcct catattttta ttcattatct gagaagcatt tgctgctaaa 1380
cgtgaagtcc tagcagtac 1399
//